RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
PTP4A3-201ENST00000329397 MEGF8Q7Z7M0 2845 aa10.42□□□□□ -0.74
PTP4A3-201ENST00000329397 A0A087WTM6 91 aa10.42□□□□□ -0.74
PTP4A3-201ENST00000329397 DNAH17Q9UFH2 4485 aa10.42□□□□□ -0.74
PTP4A3-201ENST00000329397 SPANXA2-OT1Q8N9U9 137 aa10.41□□□□□ -0.74
PTP4A3-201ENST00000329397 WWC2-AS2Q96NR7 200 aa10.4□□□□□ -0.74
PTP4A3-201ENST00000329397 C8orf17Q9NRJ1 99 aa10.4□□□□□ -0.74
PTP4A3-201ENST00000329397 H3BPC8 53 aa10.4□□□□□ -0.74
PTP4A3-201ENST00000329397 DNHD1Q96M86 4753 aa10.39□□□□□ -0.75
PTP4A3-201ENST00000329397 NUPR2A6NF83 97 aa10.39□□□□□ -0.75
PTP4A3-201ENST00000329397 RTL8CO15255 209 aa10.39□□□□□ -0.75
PTP4A3-201ENST00000329397 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
PTP4A3-201ENST00000329397 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
PTP4A3-201ENST00000329397 CDC42SE1Q9NRR8 79 aa10.37□□□□□ -0.75
PTP4A3-201ENST00000329397 COA5Q86WW8 74 aa10.37□□□□□ -0.75
PTP4A3-201ENST00000329397 IGLV5-52A0A0A0MRZ9 124 aa10.36□□□□□ -0.75
PTP4A3-201ENST00000329397 LINC00483Q53H64 154 aa10.36□□□□□ -0.75
PTP4A3-201ENST00000329397 LIMD2Q9BT23 127 aa10.36□□□□□ -0.75
PTP4A3-201ENST00000329397 A0A1B0GVX0 72 aa10.34□□□□□ -0.75
PTP4A3-201ENST00000329397 DNAH6Q9C0G6 4158 aa10.34□□□□□ -0.75
PTP4A3-201ENST00000329397 ADM2Q7Z4H4 148 aa10.34□□□□□ -0.75
PTP4A3-201ENST00000329397 ASB16-AS1Q495Z4 193 aa10.33□□□□□ -0.76
PTP4A3-201ENST00000329397 Q75L30 129 aa10.33□□□□□ -0.76
PTP4A3-201ENST00000329397 ZNF706Q9Y5V0 76 aaPredicted RBP10.33□□□□□ -0.76
PTP4A3-201ENST00000329397 CDK2AP2O75956 126 aa10.32□□□□□ -0.76
PTP4A3-201ENST00000329397 IGLV7-46A0A075B6I9 117 aa10.31□□□□□ -0.76
PTP4A3-201ENST00000329397 A0A0A0MQY5 61 aa10.3□□□□□ -0.76
PTP4A3-201ENST00000329397 ZNF861PO60384 105 aa10.3□□□□□ -0.76
PTP4A3-201ENST00000329397 MRPL34Q9BQ48 92 aaKnown RBP10.28□□□□□ -0.76
PTP4A3-201ENST00000329397 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.76
PTP4A3-201ENST00000329397 TP53AIP1Q9HCN2 124 aa10.27□□□□□ -0.76
PTP4A3-201ENST00000329397 SPAG11AQ6PDA7 123 aa10.26□□□□□ -0.77
PTP4A3-201ENST00000329397 Q6ZR54 194 aa10.26□□□□□ -0.77
PTP4A3-201ENST00000329397 PLAC8Q9NZF1 115 aa10.25□□□□□ -0.77
PTP4A3-201ENST00000329397 ALMS1Q8TCU4 4167 aa10.25□□□□□ -0.77
PTP4A3-201ENST00000329397 Q5W150 140 aa10.23□□□□□ -0.77
PTP4A3-201ENST00000329397 DNAH11Q96DT5 4516 aa10.22□□□□□ -0.77
PTP4A3-201ENST00000329397 LOC101927531A0A1B0GV80 90 aa10.2□□□□□ -0.78
PTP4A3-201ENST00000329397 HRES1P13985 223 aa10.19□□□□□ -0.78
PTP4A3-201ENST00000329397 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
PTP4A3-201ENST00000329397 RETNLBQ9BQ08 111 aa10.17□□□□□ -0.78
PTP4A3-201ENST00000329397 DNAH5Q8TE73 4624 aa10.15□□□□□ -0.78
PTP4A3-201ENST00000329397 C1orf134Q5TEV5 83 aa10.14□□□□□ -0.79
PTP4A3-201ENST00000329397 LY6G6CO95867 125 aa10.14□□□□□ -0.79
PTP4A3-201ENST00000329397 PLA2G1BP04054 148 aaKnown RBP10.11□□□□□ -0.79
PTP4A3-201ENST00000329397 SPINK7P58062 85 aa10.1□□□□□ -0.79
PTP4A3-201ENST00000329397 KRTAP10-2P60368 255 aa10.1□□□□□ -0.79
PTP4A3-201ENST00000329397 LRP1BQ9NZR2 4599 aa10.08□□□□□ -0.8
PTP4A3-201ENST00000329397 KRTAP13-3Q3SY46 172 aa10.08□□□□□ -0.8
PTP4A3-201ENST00000329397 LINC01558Q9Y6Z2 57 aa10.05□□□□□ -0.8
PTP4A3-201ENST00000329397 HYDINQ4G0P3 5121 aa10.02□□□□□ -0.81
PTP4A3-201ENST00000329397 KRTAP13-2Q52LG2 175 aa10.01□□□□□ -0.81
PTP4A3-201ENST00000329397 VPS13BQ7Z7G8 4022 aa9.97□□□□□ -0.81
PTP4A3-201ENST00000329397 SSBP3-AS1Q7Z2R9 100 aa9.97□□□□□ -0.81
PTP4A3-201ENST00000329397 CSAG1Q6PB30 78 aa9.95□□□□□ -0.82
PTP4A3-201ENST00000329397 KRTAP10-1P60331 282 aa9.94□□□□□ -0.82
PTP4A3-201ENST00000329397 PKD1P98161 4303 aa9.94□□□□□ -0.82
PTP4A3-201ENST00000329397 FAT2Q9NYQ8 4349 aa9.92□□□□□ -0.82
PTP4A3-201ENST00000329397 ACYP2P14621 99 aa9.91□□□□□ -0.82
PTP4A3-201ENST00000329397 IGKV2D-30A0A075B6S6 120 aa9.87□□□□□ -0.83
PTP4A3-201ENST00000329397 FAM229AH3BQW9 127 aa9.87□□□□□ -0.83
PTP4A3-201ENST00000329397 IGKV2-30P06310 120 aa9.87□□□□□ -0.83
PTP4A3-201ENST00000329397 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
PTP4A3-201ENST00000329397 KRTAP16-1A8MUX0 517 aa9.85□□□□□ -0.83
PTP4A3-201ENST00000329397 KRTAP1-4P0C5Y4 121 aa9.84□□□□□ -0.83
PTP4A3-201ENST00000329397 PKHD1P08F94 4074 aa9.84□□□□□ -0.83
PTP4A3-201ENST00000329397 ROMO1P60602 79 aa9.8□□□□□ -0.84
PTP4A3-201ENST00000329397 Q6ZSA8 131 aa9.8□□□□□ -0.84
PTP4A3-201ENST00000329397 A0A1B0GU69 56 aa9.75□□□□□ -0.85
PTP4A3-201ENST00000329397 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
PTP4A3-201ENST00000329397 SPINK1P00995 79 aa9.69□□□□□ -0.86
PTP4A3-201ENST00000329397 Q8N1X5 172 aa9.68□□□□□ -0.86
PTP4A3-201ENST00000329397 MIR22HGQ0VDD5 57 aa9.64□□□□□ -0.87
PTP4A3-201ENST00000329397 P0C880 135 aa9.64□□□□□ -0.87
PTP4A3-201ENST00000329397 SACSQ9NZJ4 4579 aa9.64□□□□□ -0.87
PTP4A3-201ENST00000329397 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
PTP4A3-201ENST00000329397 FAT1Q14517 4588 aa9.62□□□□□ -0.87
PTP4A3-201ENST00000329397 C9orf92A6NGG3 77 aa9.58□□□□□ -0.88
PTP4A3-201ENST00000329397 LINC00304Q8N9R0 145 aa9.56□□□□□ -0.88
PTP4A3-201ENST00000329397 SPATA8Q6RVD6 105 aa9.54□□□□□ -0.88
PTP4A3-201ENST00000329397 UQCR11O14957 56 aa9.53□□□□□ -0.88
PTP4A3-201ENST00000329397 DYNC1H1Q14204 4646 aaKnown RBP9.52□□□□□ -0.88
PTP4A3-201ENST00000329397 KRTAP25-1Q3LHN0 102 aa9.44□□□□□ -0.9
PTP4A3-201ENST00000329397 APOBP04114 4563 aaKnown RBP9.38□□□□□ -0.91
PTP4A3-201ENST00000329397 KRTAP21-3Q3LHN1 58 aa9.38□□□□□ -0.91
PTP4A3-201ENST00000329397 KMT2CQ8NEZ4 4911 aaKnown RBP9.38□□□□□ -0.91
PTP4A3-201ENST00000329397 KRTAP3-1Q9BYR8 98 aa9.37□□□□□ -0.91
PTP4A3-201ENST00000329397 PKHD1L1Q86WI1 4243 aa9.36□□□□□ -0.91
PTP4A3-201ENST00000329397 A8MUU9 505 aa9.32□□□□□ -0.92
PTP4A3-201ENST00000329397 RPS29P62273 56 aaKnown RBP9.31□□□□□ -0.92
PTP4A3-201ENST00000329397 FLG2Q5D862 2391 aaPredicted RBP9.31□□□□□ -0.92
PTP4A3-201ENST00000329397 NDUFAF8A1L188 74 aa9.31□□□□□ -0.92
PTP4A3-201ENST00000329397 C20orf166-AS1Q96NR2 134 aa9.31□□□□□ -0.92
PTP4A3-201ENST00000329397 H0YAA0 97 aa9.3□□□□□ -0.92
PTP4A3-201ENST00000329397 LRP1Q07954 4544 aaKnown RBP9.28□□□□□ -0.92
PTP4A3-201ENST00000329397 KRTAP10-4P60372 401 aaPredicted RBP9.28□□□□□ -0.92
PTP4A3-201ENST00000329397 RYR2Q92736 4967 aa9.25□□□□□ -0.93
PTP4A3-201ENST00000329397 DMBT1Q9UGM3 2413 aaPredicted RBP9.24□□□□□ -0.93
PTP4A3-201ENST00000329397 MYCBP2O75592 4640 aa9.21□□□□□ -0.93
PTP4A3-201ENST00000329397 A0A1B0GVY2 172 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms