RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 NPFFO15130 113 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 RPL7P18124 248 aaKnown RBP0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 S100GP29377 79 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 LINC00305Q7Z4B0 112 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 DSCR8Q96T75 97 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 DYNLRB1Q9NP97 96 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 K7EQZ3 153 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 FXYD1O00168 92 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 UQCRHP07919 91 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 IGLC6P0CF74 106 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 FXYD4P59646 89 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 MED12Q93074 2177 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 TMEM141Q96I45 108 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 PRR15LQ9BU68 103 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 BET1LQ9NYM9 111 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 DOCK11Q5JSL3 2073 aa0.26□□□□□ -2.37
CCDC144A-201ENST00000328495 TRBV10-1A0A0K0K1A3 114 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 C9orf92A6NGG3 77 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 K7EIM0 57 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 SPINK1P00995 79 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 HMGN2P05204 90 aaKnown RBP0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 INSL3P51460 131 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 RHOHQ15669 191 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 Q8TAT8 98 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 TMEM263Q8WUH6 116 aaKnown RBP0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 TP53AIP1Q9HCN2 124 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 UBE2L5PA0A1B0GUS4 154 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 H3BUX3 64 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 S100A3P33764 101 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 PCBD1P61457 104 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 UBE2L3P68036 154 aaKnown RBP0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 TMEM14BQ9NUH8 114 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 MRPL36Q9P0J6 103 aaKnown RBP0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 UFC1Q9Y3C8 167 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 LINC00587B1AMM8 73 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 GCHFRP30047 84 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 MIR22HGQ0VDD5 57 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 C10orf128Q5T292 105 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 DYNLRB2Q8TF09 96 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 DPH3P1Q9H4G8 78 aa0.25□□□□□ -2.37
CCDC144A-201ENST00000328495 hADV29S1A0JD25 119 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 CRYM-AS1A6NIL9 109 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 I3L2K1 104 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 K7ERJ3 54 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 TCRAP04437 139 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 ZNF56Q15929 161 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 KRTAP19-5Q3LI72 72 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 GTF2H5Q6ZYL4 71 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 CLEC2BQ92478 149 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 PROK2Q9HC23 129 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 J3QR89 54 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 CCKP06307 115 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 PYYP10082 97 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 PLNP26678 52 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 EDDM3BP56851 147 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 BLCAPP62952 87 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 KRTAP19-8Q3LI54 63 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 TMEM167BQ9NRX6 74 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 CDKN2A-AS1Q9UH64 79 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 SS18L2Q9UHA2 77 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 V9GYV3 84 aa0.24□□□□□ -2.37
CCDC144A-201ENST00000328495 C9JAW5 83 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 RBM3P98179 157 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 SNRNP200O75643 2136 aaKnown RBP0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 H0YGX0 51 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 NDUFA1O15239 70 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 LEPROTL1O95214 131 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 PEA15Q15121 130 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 C12orf57Q99622 126 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 IAPPP10997 89 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 COX6A2Q02221 97 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 PLAC4Q8WY50 150 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 PRO1933Q9H354 126 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 HIGD1AQ9Y241 93 aa0.23□□□□□ -2.37
CCDC144A-201ENST00000328495 FXYD6-FXYD2A0A087WZ82 144 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 UQCR11O14957 56 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 MRPL33O75394 65 aaKnown RBP0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 CCL18P55774 89 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 ZCCHC23Q6ZST2 131 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 MYO18AQ92614 2054 aaKnown RBP0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 CEBPZOSA8MTT3 80 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 M0R2T5 61 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 IFI27P40305 119 aaPredicted RBP0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 A0A087WTM6 91 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 MYMXA0A1B0GTQ4 84 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 RPL37P61927 97 aaKnown RBP0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 Q96NJ1 140 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 FKBP11Q9NYL4 201 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 KAAG1Q9UBP8 84 aa0.22□□□□□ -2.37
CCDC144A-201ENST00000328495 TRAV22A0A0B4J277 110 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 NDUFA3O95167 84 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 POLR2KP53803 58 aaKnown RBP0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 S100A10P60903 97 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 NXT2Q9NPJ8 142 aaKnown RBP0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 F5P12259 2224 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 A0A1B0GUT8 65 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 IGKCP01834 107 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 FCER1GP30273 86 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 FXYD3Q14802 87 aa0.21□□□□□ -2.38
CCDC144A-201ENST00000328495 FAM223AQ8IWN6 122 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms