RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DEFB1P60022 68 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 KLK9Q2XQG4 91 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 CLPSL2Q6UWE3 100 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 C10orf99Q6UWK7 81 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 RHPN1-AS1Q9BWJ2 59 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 SMG1Q96Q15 3661 aaKnown RBP0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 TRRAPQ9Y4A5 3859 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 BOD1L1Q8NFC6 3051 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 TRANK1O15050 2925 aa0.58□□□□□ -2.32
CBX3P1-201ENST00000325243 NOTCH1P46531 2555 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 FRYQ5TBA9 3013 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 EP300Q09472 2414 aaPredicted RBP0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 LAMA5O15230 3695 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 RELNP78509 3460 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 UNC80Q8N2C7 3258 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 LAMA1P25391 3075 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 LRBAP50851 2863 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 CHD9Q3L8U1 2897 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 LAMA3Q16787 3333 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 ANK2Q01484 3957 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 JMJD1CQ15652 2540 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 WDFY4Q6ZS81 3184 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 K7EIL1 84 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 PRLHP81277 87 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 H1FX-AS1Q4G0G2 97 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 COX6B2Q6YFQ2 88 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 UBE2DNLQ8IWF7 75 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 USMG5Q96IX5 58 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 C10orf95Q9H7T3 257 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 ITPR1Q14643 2758 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 ABCA12Q86UK0 2595 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 AKAP13Q12802 2813 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 DNAH14Q0VDD8 3507 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 DNAH7Q8WXX0 4024 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 FREM2Q5SZK8 3169 aa0.57□□□□□ -2.32
CBX3P1-201ENST00000325243 CELSR1Q9NYQ6 3014 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 WDFY3Q8IZQ1 3526 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 DNAH3Q8TD57 4116 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 PTPN13Q12923 2485 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 ASPMQ8IZT6 3477 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 H3BUA1 57 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB130BP0DP73 79 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB130AP0DP74 79 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 RPL37P61927 97 aaKnown RBP0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB109BQ30KR1 87 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 Q9Y3F1 56 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 VWFP04275 2813 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 DCHS2Q6V1P9 2916 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 UTP20O75691 2785 aaKnown RBP0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 ATMQ13315 3056 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 COL12A1Q99715 3063 aa0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 MAP1AP78559 2803 aaPredicted RBP0.56□□□□□ -2.32
CBX3P1-201ENST00000325243 VPS13DQ5THJ4 4388 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 F8P00451 2351 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 CSMD1Q96PZ7 3565 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 CELSR3Q9NYQ7 3312 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 PKD1L2Q7Z442 2459 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 VPS13CQ709C8 3753 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 SPINK1P00995 79 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 SPRR1AP35321 89 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 LELP1Q5T871 98 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 NOP10Q9NPE3 64 aaKnown RBP0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 APLNQ9ULZ1 77 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 LOC400499M0QZD8 3231 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 SONP18583 2426 aaKnown RBP0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 APCP25054 2843 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 SPTAN1Q13813 2472 aaKnown RBP0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 RIF1Q5UIP0 2472 aaKnown RBP0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 HECTD4Q9Y4D8 3996 aa0.55□□□□□ -2.32
CBX3P1-201ENST00000325243 VPS13BQ7Z7G8 4022 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 CRYBG3Q68DQ2 2970 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 ZNF292O60281 2723 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 TACC2O95359 2948 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 H3BUX3 64 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB136Q30KP8 78 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB133Q30KQ1 61 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 DEFB123Q8N688 67 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 MEGF8Q7Z7M0 2845 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 DMXL2Q8TDJ6 3036 aa0.54□□□□□ -2.32
CBX3P1-201ENST00000325243 PRKDCP78527 4128 aaKnown RBP0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 BRCA2P51587 3418 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 DNAH6Q9C0G6 4158 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 DMBT1Q9UGM3 2413 aaPredicted RBP0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 A0A096LPF7 62 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 SPRR1BP22528 89 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 PRO0255Q9UI72 69 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 S4R3F8 94 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 SETD2Q9BYW2 2564 aaPredicted RBP0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 VCANP13611 3396 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 TEX15Q9BXT5 2789 aa0.53□□□□□ -2.32
CBX3P1-201ENST00000325243 CSMD3Q7Z407 3707 aa0.53□□□□□ -2.33
CBX3P1-201ENST00000325243 PIEZO1Q92508 2521 aa0.53□□□□□ -2.33
CBX3P1-201ENST00000325243 TLN1Q9Y490 2541 aaKnown RBP0.53□□□□□ -2.33
CBX3P1-201ENST00000325243 A0A096LNI7 61 aa0.52□□□□□ -2.33
CBX3P1-201ENST00000325243 A0A0D9SG42 100 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms