RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 UQCR11O14957 56 aa9.36□□□□□ -0.91
VARS2-201ENST00000321897 PLA2G1BP04054 148 aaKnown RBP9.35□□□□□ -0.91
VARS2-201ENST00000321897 LINC00313P59037 77 aa9.34□□□□□ -0.91
VARS2-201ENST00000321897 HRES1P13985 223 aa9.33□□□□□ -0.92
VARS2-201ENST00000321897 TYMSOSQ8TAI1 123 aa9.32□□□□□ -0.92
VARS2-201ENST00000321897 CSMD3Q7Z407 3707 aa9.31□□□□□ -0.92
VARS2-201ENST00000321897 KRTAP4-16G5E9R7 235 aaPredicted RBP9.31□□□□□ -0.92
VARS2-201ENST00000321897 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
VARS2-201ENST00000321897 LINC00472Q9H8W2 130 aa9.29□□□□□ -0.92
VARS2-201ENST00000321897 Q96NJ1 140 aa9.29□□□□□ -0.92
VARS2-201ENST00000321897 IGLV7-43P04211 117 aa9.28□□□□□ -0.92
VARS2-201ENST00000321897 H3BS24 57 aa9.25□□□□□ -0.93
VARS2-201ENST00000321897 WWC2-AS2Q96NR7 200 aa9.25□□□□□ -0.93
VARS2-201ENST00000321897 C9orf92A6NGG3 77 aa9.25□□□□□ -0.93
VARS2-201ENST00000321897 FAM229AH3BQW9 127 aa9.25□□□□□ -0.93
VARS2-201ENST00000321897 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
VARS2-201ENST00000321897 KRTAP29-1A8MX34 341 aaPredicted RBP9.24□□□□□ -0.93
VARS2-201ENST00000321897 Q8N1X5 172 aa9.22□□□□□ -0.93
VARS2-201ENST00000321897 ANK3Q12955 4377 aaKnown RBP9.22□□□□□ -0.93
VARS2-201ENST00000321897 LINC01554Q52M75 96 aa9.22□□□□□ -0.93
VARS2-201ENST00000321897 SSBP3-AS1Q7Z2R9 100 aa9.21□□□□□ -0.94
VARS2-201ENST00000321897 FBN3Q75N90 2809 aa9.2□□□□□ -0.94
VARS2-201ENST00000321897 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
VARS2-201ENST00000321897 LCE6AA0A183 80 aa9.18□□□□□ -0.94
VARS2-201ENST00000321897 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
VARS2-201ENST00000321897 CSAG1Q6PB30 78 aa9.16□□□□□ -0.94
VARS2-201ENST00000321897 A0A087X002 238 aa9.14□□□□□ -0.95
VARS2-201ENST00000321897 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
VARS2-201ENST00000321897 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
VARS2-201ENST00000321897 A6NN06 94 aa9.12□□□□□ -0.95
VARS2-201ENST00000321897 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
VARS2-201ENST00000321897 AKAP9Q99996 3911 aa9.05□□□□□ -0.96
VARS2-201ENST00000321897 SPRR1BP22528 89 aa9.05□□□□□ -0.96
VARS2-201ENST00000321897 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
VARS2-201ENST00000321897 Q5W150 140 aa9.05□□□□□ -0.96
VARS2-201ENST00000321897 LINC00304Q8N9R0 145 aa9.05□□□□□ -0.96
VARS2-201ENST00000321897 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
VARS2-201ENST00000321897 Q6ZRN7 208 aaPredicted RBP9.01□□□□□ -0.97
VARS2-201ENST00000321897 A0A0D9SG42 100 aa8.97□□□□□ -0.97
VARS2-201ENST00000321897 Q6ZR54 194 aa8.96□□□□□ -0.97
VARS2-201ENST00000321897 MEGF8Q7Z7M0 2845 aa8.91□□□□□ -0.98
VARS2-201ENST00000321897 DMAC1Q96GE9 116 aa8.87□□□□□ -0.99
VARS2-201ENST00000321897 A0A1B0GU33 70 aa8.85□□□□□ -0.99
VARS2-201ENST00000321897 KRTAP13-1Q8IUC0 172 aa8.82□□□□□ -1
VARS2-201ENST00000321897 LINC00483Q53H64 154 aa8.81□□□□□ -1
VARS2-201ENST00000321897 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
VARS2-201ENST00000321897 KRTAP13-2Q52LG2 175 aa8.75□□□□□ -1.01
VARS2-201ENST00000321897 KRTAP25-1Q3LHN0 102 aa8.54□□□□□ -1.04
VARS2-201ENST00000321897 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
VARS2-201ENST00000321897 H1FX-AS1Q4G0G2 97 aa8.53□□□□□ -1.04
VARS2-201ENST00000321897 Q5VSD8 79 aa8.49□□□□□ -1.05
VARS2-201ENST00000321897 J3QL48 77 aa8.49□□□□□ -1.05
VARS2-201ENST00000321897 ROMO1P60602 79 aa8.46□□□□□ -1.05
VARS2-201ENST00000321897 HUWE1Q7Z6Z7 4374 aaKnown RBP8.45□□□□□ -1.06
VARS2-201ENST00000321897 RPL37P61927 97 aaKnown RBP8.44□□□□□ -1.06
VARS2-201ENST00000321897 KRTAP1-4P0C5Y4 121 aa8.43□□□□□ -1.06
VARS2-201ENST00000321897 DNAH10Q8IVF4 4471 aa8.43□□□□□ -1.06
VARS2-201ENST00000321897 A8MUU9 505 aa8.41□□□□□ -1.06
VARS2-201ENST00000321897 Q6ZSA8 131 aa8.41□□□□□ -1.06
VARS2-201ENST00000321897 NDUFAF8A1L188 74 aa8.39□□□□□ -1.07
VARS2-201ENST00000321897 COX6B2Q6YFQ2 88 aa8.39□□□□□ -1.07
VARS2-201ENST00000321897 H0YAA0 97 aa8.35□□□□□ -1.07
VARS2-201ENST00000321897 ANK2Q01484 3957 aa8.32□□□□□ -1.08
VARS2-201ENST00000321897 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
VARS2-201ENST00000321897 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
VARS2-201ENST00000321897 DNHD1Q96M86 4753 aa8.26□□□□□ -1.09
VARS2-201ENST00000321897 PLECQ15149 4684 aaKnown RBP8.26□□□□□ -1.09
VARS2-201ENST00000321897 S4R3F8 94 aa8.25□□□□□ -1.09
VARS2-201ENST00000321897 KRTAP16-1A8MUX0 517 aa8.2□□□□□ -1.1
VARS2-201ENST00000321897 LUZP6Q538Z0 58 aa8.18□□□□□ -1.1
VARS2-201ENST00000321897 LYSTQ99698 3801 aa8.17□□□□□ -1.1
VARS2-201ENST00000321897 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
VARS2-201ENST00000321897 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
VARS2-201ENST00000321897 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
VARS2-201ENST00000321897 R4GN34 69 aa8.07□□□□□ -1.12
VARS2-201ENST00000321897 C20orf166-AS1Q96NR2 134 aa8.06□□□□□ -1.12
VARS2-201ENST00000321897 STARD9Q9P2P6 4700 aa8.05□□□□□ -1.12
VARS2-201ENST00000321897 M0QZ58 72 aa8.05□□□□□ -1.12
VARS2-201ENST00000321897 PRKDCP78527 4128 aaKnown RBP8.03□□□□□ -1.12
VARS2-201ENST00000321897 RPS29P62273 56 aaKnown RBP8.03□□□□□ -1.12
VARS2-201ENST00000321897 DNAH1Q9P2D7 4330 aa8.01□□□□□ -1.13
VARS2-201ENST00000321897 KMT2AQ03164 3969 aa7.98□□□□□ -1.13
VARS2-201ENST00000321897 XP32Q5T750 250 aa7.95□□□□□ -1.14
VARS2-201ENST00000321897 M0R2T5 61 aa7.94□□□□□ -1.14
VARS2-201ENST00000321897 FAT1Q14517 4588 aa7.93□□□□□ -1.14
VARS2-201ENST00000321897 DNAH8Q96JB1 4490 aa7.92□□□□□ -1.14
VARS2-201ENST00000321897 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
VARS2-201ENST00000321897 P0C880 135 aa7.91□□□□□ -1.14
VARS2-201ENST00000321897 DNAH5Q8TE73 4624 aa7.89□□□□□ -1.15
VARS2-201ENST00000321897 SEC61BP60468 96 aaKnown RBP7.87□□□□□ -1.15
VARS2-201ENST00000321897 A0A1B0GVY2 172 aa7.85□□□□□ -1.15
VARS2-201ENST00000321897 KRTAP3-1Q9BYR8 98 aa7.84□□□□□ -1.15
VARS2-201ENST00000321897 LRP1BQ9NZR2 4599 aa7.84□□□□□ -1.15
VARS2-201ENST00000321897 TPRXLQ17RH7 258 aa7.84□□□□□ -1.15
VARS2-201ENST00000321897 DNAH7Q8WXX0 4024 aa7.84□□□□□ -1.16
VARS2-201ENST00000321897 KRTAP21-3Q3LHN1 58 aa7.81□□□□□ -1.16
VARS2-201ENST00000321897 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
VARS2-201ENST00000321897 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
VARS2-201ENST00000321897 MYCBP2O75592 4640 aa7.77□□□□□ -1.16
VARS2-201ENST00000321897 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms