RNA–Protein interactions for RNA: ENST00000321110.1

RTL3-201, Transcript of retrotransposon Gag like 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RTL3, Length 2,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3-201ENST00000321110 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
RTL3-201ENST00000321110 DNAH10Q8IVF4 4471 aa4.7□□□□□ -1.66
RTL3-201ENST00000321110 ANK2Q01484 3957 aa4.69□□□□□ -1.66
RTL3-201ENST00000321110 CMYA5Q8N3K9 4069 aa4.68□□□□□ -1.66
RTL3-201ENST00000321110 ZNF861PO60384 105 aa4.68□□□□□ -1.66
RTL3-201ENST00000321110 C1orf134Q5TEV5 83 aa4.67□□□□□ -1.66
RTL3-201ENST00000321110 LYSTQ99698 3801 aa4.67□□□□□ -1.66
RTL3-201ENST00000321110 KRTAP1-5Q9BYS1 174 aa4.67□□□□□ -1.66
RTL3-201ENST00000321110 ZNF706Q9Y5V0 76 aaPredicted RBP4.67□□□□□ -1.66
RTL3-201ENST00000321110 DNAH3Q8TD57 4116 aa4.65□□□□□ -1.66
RTL3-201ENST00000321110 PANO1I0J062 215 aa4.65□□□□□ -1.67
RTL3-201ENST00000321110 LINC00483Q53H64 154 aa4.64□□□□□ -1.67
RTL3-201ENST00000321110 ROMO1P60602 79 aa4.64□□□□□ -1.67
RTL3-201ENST00000321110 SPINK6Q6UWN8 80 aa4.64□□□□□ -1.67
RTL3-201ENST00000321110 WWC2-AS2Q96NR7 200 aa4.64□□□□□ -1.67
RTL3-201ENST00000321110 ANAPC11Q9NYG5 84 aa4.63□□□□□ -1.67
RTL3-201ENST00000321110 NBEAL1Q6ZS30 2694 aa4.63□□□□□ -1.67
RTL3-201ENST00000321110 NOTCH1P46531 2555 aa4.62□□□□□ -1.67
RTL3-201ENST00000321110 MGAM2Q2M2H8 2515 aa4.6□□□□□ -1.67
RTL3-201ENST00000321110 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
RTL3-201ENST00000321110 IGKV2-30P06310 120 aa4.59□□□□□ -1.67
RTL3-201ENST00000321110 KRTAP25-1Q3LHN0 102 aa4.59□□□□□ -1.68
RTL3-201ENST00000321110 DNAH9Q9NYC9 4486 aa4.58□□□□□ -1.68
RTL3-201ENST00000321110 FAM229AH3BQW9 127 aa4.57□□□□□ -1.68
RTL3-201ENST00000321110 HUWE1Q7Z6Z7 4374 aaKnown RBP4.56□□□□□ -1.68
RTL3-201ENST00000321110 DNHD1Q96M86 4753 aa4.56□□□□□ -1.68
RTL3-201ENST00000321110 C14orf177Q52M58 125 aa4.56□□□□□ -1.68
RTL3-201ENST00000321110 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.56□□□□□ -1.68
RTL3-201ENST00000321110 A8MUU9 505 aa4.56□□□□□ -1.68
RTL3-201ENST00000321110 IGLV5-52A0A0A0MRZ9 124 aa4.54□□□□□ -1.68
RTL3-201ENST00000321110 J3QL48 77 aa4.54□□□□□ -1.68
RTL3-201ENST00000321110 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
RTL3-201ENST00000321110 SPACA4Q8TDM5 124 aa4.53□□□□□ -1.68
RTL3-201ENST00000321110 PSORS1C2Q9UIG4 136 aa4.53□□□□□ -1.68
RTL3-201ENST00000321110 H0YAA0 97 aa4.52□□□□□ -1.69
RTL3-201ENST00000321110 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
RTL3-201ENST00000321110 UBE2DNLQ8IWF7 75 aa4.52□□□□□ -1.69
RTL3-201ENST00000321110 CIRBP-AS1Q8TBR5 109 aa4.52□□□□□ -1.69
RTL3-201ENST00000321110 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
RTL3-201ENST00000321110 SPINK1P00995 79 aa4.51□□□□□ -1.69
RTL3-201ENST00000321110 Q6ZSA8 131 aa4.51□□□□□ -1.69
RTL3-201ENST00000321110 MEGF8Q7Z7M0 2845 aa4.51□□□□□ -1.69
RTL3-201ENST00000321110 P0C880 135 aa4.51□□□□□ -1.69
RTL3-201ENST00000321110 FRAS1Q86XX4 4008 aa4.5□□□□□ -1.69
RTL3-201ENST00000321110 APLNQ9ULZ1 77 aa4.49□□□□□ -1.69
RTL3-201ENST00000321110 STAB2Q8WWQ8 2551 aa4.49□□□□□ -1.69
RTL3-201ENST00000321110 KRTAP16-1A8MUX0 517 aa4.48□□□□□ -1.69
RTL3-201ENST00000321110 LY6G6CO95867 125 aa4.48□□□□□ -1.69
RTL3-201ENST00000321110 CRIPTQ9P021 101 aa4.47□□□□□ -1.69
RTL3-201ENST00000321110 FLG2Q5D862 2391 aaPredicted RBP4.46□□□□□ -1.69
RTL3-201ENST00000321110 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
RTL3-201ENST00000321110 Q6ZRN7 208 aaPredicted RBP4.46□□□□□ -1.7
RTL3-201ENST00000321110 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
RTL3-201ENST00000321110 Q8N1X5 172 aa4.45□□□□□ -1.7
RTL3-201ENST00000321110 TYMSOSQ8TAI1 123 aa4.44□□□□□ -1.7
RTL3-201ENST00000321110 TGP01266 2768 aa4.44□□□□□ -1.7
RTL3-201ENST00000321110 NBDYA0A0U1RRE5 68 aa4.43□□□□□ -1.7
RTL3-201ENST00000321110 KRTAP21-3Q3LHN1 58 aa4.43□□□□□ -1.7
RTL3-201ENST00000321110 XP32Q5T750 250 aa4.42□□□□□ -1.7
RTL3-201ENST00000321110 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
RTL3-201ENST00000321110 DNAH17Q9UFH2 4485 aa4.42□□□□□ -1.7
RTL3-201ENST00000321110 SSBP3-AS1Q7Z2R9 100 aa4.42□□□□□ -1.7
RTL3-201ENST00000321110 A0A1B0GU33 70 aa4.41□□□□□ -1.7
RTL3-201ENST00000321110 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.7
RTL3-201ENST00000321110 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.7
RTL3-201ENST00000321110 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
RTL3-201ENST00000321110 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
RTL3-201ENST00000321110 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
RTL3-201ENST00000321110 FBN3Q75N90 2809 aa4.38□□□□□ -1.71
RTL3-201ENST00000321110 NUPR2A6NF83 97 aa4.38□□□□□ -1.71
RTL3-201ENST00000321110 A0A087WTM6 91 aa4.37□□□□□ -1.71
RTL3-201ENST00000321110 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
RTL3-201ENST00000321110 KRTAP13-2Q52LG2 175 aa4.37□□□□□ -1.71
RTL3-201ENST00000321110 VPS13DQ5THJ4 4388 aa4.35□□□□□ -1.71
RTL3-201ENST00000321110 LCE2DQ5TA82 110 aaPredicted RBP4.34□□□□□ -1.71
RTL3-201ENST00000321110 C20orf166-AS1Q96NR2 134 aa4.33□□□□□ -1.72
RTL3-201ENST00000321110 STARD9Q9P2P6 4700 aa4.32□□□□□ -1.72
RTL3-201ENST00000321110 KRTAP3-1Q9BYR8 98 aa4.32□□□□□ -1.72
RTL3-201ENST00000321110 NDUFAF8A1L188 74 aa4.31□□□□□ -1.72
RTL3-201ENST00000321110 SPINT4Q6UDR6 99 aa4.31□□□□□ -1.72
RTL3-201ENST00000321110 K7ERS5 55 aa4.31□□□□□ -1.72
RTL3-201ENST00000321110 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
RTL3-201ENST00000321110 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
RTL3-201ENST00000321110 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
RTL3-201ENST00000321110 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
RTL3-201ENST00000321110 DNAH2Q9P225 4427 aa4.27□□□□□ -1.73
RTL3-201ENST00000321110 C10orf95Q9H7T3 257 aa4.25□□□□□ -1.73
RTL3-201ENST00000321110 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
RTL3-201ENST00000321110 DNAH11Q96DT5 4516 aa4.22□□□□□ -1.73
RTL3-201ENST00000321110 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
RTL3-201ENST00000321110 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
RTL3-201ENST00000321110 KRTAP13-4Q3LI77 160 aa4.21□□□□□ -1.74
RTL3-201ENST00000321110 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
RTL3-201ENST00000321110 A0A0D9SG42 100 aa4.19□□□□□ -1.74
RTL3-201ENST00000321110 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
RTL3-201ENST00000321110 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
RTL3-201ENST00000321110 DNAH5Q8TE73 4624 aa4.17□□□□□ -1.74
RTL3-201ENST00000321110 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
RTL3-201ENST00000321110 C9orf92A6NGG3 77 aa4.15□□□□□ -1.74
RTL3-201ENST00000321110 HYDINQ4G0P3 5121 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms