RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 TENM1Q9UKZ4 2725 aa9.35□□□□□ -0.91
GCFC2-201ENST00000321027 PANO1I0J062 215 aa9.34□□□□□ -0.91
GCFC2-201ENST00000321027 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
GCFC2-201ENST00000321027 VWFP04275 2813 aa9.32□□□□□ -0.92
GCFC2-201ENST00000321027 PLAC8Q9NZF1 115 aa9.31□□□□□ -0.92
GCFC2-201ENST00000321027 Q5VV11 94 aa9.29□□□□□ -0.92
GCFC2-201ENST00000321027 RBM12B-AS1Q9P1G2 102 aa9.29□□□□□ -0.92
GCFC2-201ENST00000321027 PDZD2O15018 2839 aa9.28□□□□□ -0.92
GCFC2-201ENST00000321027 KRTAP11-1Q8IUC1 163 aa9.28□□□□□ -0.92
GCFC2-201ENST00000321027 OTOGQ6ZRI0 2925 aa9.27□□□□□ -0.93
GCFC2-201ENST00000321027 KRTAP29-1A8MX34 341 aaPredicted RBP9.25□□□□□ -0.93
GCFC2-201ENST00000321027 FBN1P35555 2871 aaKnown RBP9.25□□□□□ -0.93
GCFC2-201ENST00000321027 Q75L30 129 aa9.25□□□□□ -0.93
GCFC2-201ENST00000321027 A0A1B0GU33 70 aa9.24□□□□□ -0.93
GCFC2-201ENST00000321027 ZCCHC13Q8WW36 166 aaKnown RBP9.24□□□□□ -0.93
GCFC2-201ENST00000321027 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
GCFC2-201ENST00000321027 Q5W150 140 aa9.19□□□□□ -0.94
GCFC2-201ENST00000321027 KRTAP10-2P60368 255 aa9.19□□□□□ -0.94
GCFC2-201ENST00000321027 PRAC1Q96KF2 57 aa9.19□□□□□ -0.94
GCFC2-201ENST00000321027 SPINK7P58062 85 aa9.17□□□□□ -0.94
GCFC2-201ENST00000321027 Q6ZSA8 131 aa9.16□□□□□ -0.94
GCFC2-201ENST00000321027 Q6ZR54 194 aa9.15□□□□□ -0.94
GCFC2-201ENST00000321027 NBPF19A0A087WUL8 3843 aa9.14□□□□□ -0.95
GCFC2-201ENST00000321027 A0A087X002 238 aa9.14□□□□□ -0.95
GCFC2-201ENST00000321027 NOTCH2NLQ7Z3S9 236 aa9.14□□□□□ -0.95
GCFC2-201ENST00000321027 KRTAP10-1P60331 282 aa9.13□□□□□ -0.95
GCFC2-201ENST00000321027 Q6ZRN7 208 aaPredicted RBP9.1□□□□□ -0.95
GCFC2-201ENST00000321027 LCE6AA0A183 80 aa9.08□□□□□ -0.96
GCFC2-201ENST00000321027 LINC00483Q53H64 154 aa9.08□□□□□ -0.96
GCFC2-201ENST00000321027 PKD1L1Q8TDX9 2849 aa9.06□□□□□ -0.96
GCFC2-201ENST00000321027 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
GCFC2-201ENST00000321027 AKAP9Q99996 3911 aa9.02□□□□□ -0.97
GCFC2-201ENST00000321027 A8MU10 97 aa9□□□□□ -0.97
GCFC2-201ENST00000321027 CSAG1Q6PB30 78 aa9□□□□□ -0.97
GCFC2-201ENST00000321027 LUZP6Q538Z0 58 aa8.99□□□□□ -0.97
GCFC2-201ENST00000321027 DMAC1Q96GE9 116 aa8.96□□□□□ -0.97
GCFC2-201ENST00000321027 KRTAP13-1Q8IUC0 172 aa8.95□□□□□ -0.98
GCFC2-201ENST00000321027 TENM2Q9NT68 2774 aa8.94□□□□□ -0.98
GCFC2-201ENST00000321027 TGP01266 2768 aa8.94□□□□□ -0.98
GCFC2-201ENST00000321027 ZNF469Q96JG9 3925 aaPredicted RBP8.93□□□□□ -0.98
GCFC2-201ENST00000321027 S4R3F8 94 aa8.92□□□□□ -0.98
GCFC2-201ENST00000321027 M0R2T5 61 aa8.88□□□□□ -0.99
GCFC2-201ENST00000321027 R4GN34 69 aa8.87□□□□□ -0.99
GCFC2-201ENST00000321027 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
GCFC2-201ENST00000321027 Q5VSD8 79 aa8.82□□□□□ -1
GCFC2-201ENST00000321027 SPATA8Q6RVD6 105 aa8.79□□□□□ -1
GCFC2-201ENST00000321027 H3BS24 57 aa8.78□□□□□ -1
GCFC2-201ENST00000321027 KRTAP13-2Q52LG2 175 aa8.78□□□□□ -1
GCFC2-201ENST00000321027 TRRAPQ9Y4A5 3859 aa8.76□□□□□ -1.01
GCFC2-201ENST00000321027 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
GCFC2-201ENST00000321027 ASB16-AS1Q495Z4 193 aa8.72□□□□□ -1.01
GCFC2-201ENST00000321027 A6NN06 94 aa8.72□□□□□ -1.01
GCFC2-201ENST00000321027 M0QZ58 72 aa8.71□□□□□ -1.02
GCFC2-201ENST00000321027 ROMO1P60602 79 aa8.71□□□□□ -1.02
GCFC2-201ENST00000321027 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
GCFC2-201ENST00000321027 SRRM2Q9UQ35 2752 aaKnown RBP8.7□□□□□ -1.02
GCFC2-201ENST00000321027 KRTAP21-3Q3LHN1 58 aa8.69□□□□□ -1.02
GCFC2-201ENST00000321027 ANK3Q12955 4377 aaKnown RBP8.67□□□□□ -1.02
GCFC2-201ENST00000321027 ADM2Q7Z4H4 148 aa8.65□□□□□ -1.02
GCFC2-201ENST00000321027 FBN3Q75N90 2809 aa8.58□□□□□ -1.04
GCFC2-201ENST00000321027 A0A0A0MQY5 61 aa8.51□□□□□ -1.05
GCFC2-201ENST00000321027 RPS29P62273 56 aaKnown RBP8.49□□□□□ -1.05
GCFC2-201ENST00000321027 KRTAP1-4P0C5Y4 121 aa8.45□□□□□ -1.06
GCFC2-201ENST00000321027 KRTAP25-1Q3LHN0 102 aa8.4□□□□□ -1.06
GCFC2-201ENST00000321027 A8MUU9 505 aa8.38□□□□□ -1.07
GCFC2-201ENST00000321027 MEGF8Q7Z7M0 2845 aa8.34□□□□□ -1.07
GCFC2-201ENST00000321027 KRTAP16-1A8MUX0 517 aa8.32□□□□□ -1.08
GCFC2-201ENST00000321027 PLAC4Q8WY50 150 aa8.32□□□□□ -1.08
GCFC2-201ENST00000321027 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
GCFC2-201ENST00000321027 C20orf166-AS1Q96NR2 134 aa8.29□□□□□ -1.08
GCFC2-201ENST00000321027 KRTAP13-3Q3SY46 172 aa8.28□□□□□ -1.08
GCFC2-201ENST00000321027 CSMD3Q7Z407 3707 aa8.23□□□□□ -1.09
GCFC2-201ENST00000321027 NDUFAF8A1L188 74 aa8.23□□□□□ -1.09
GCFC2-201ENST00000321027 H0YAA0 97 aa8.19□□□□□ -1.1
GCFC2-201ENST00000321027 ANK2Q01484 3957 aa8.12□□□□□ -1.11
GCFC2-201ENST00000321027 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
GCFC2-201ENST00000321027 C10orf95Q9H7T3 257 aa8.08□□□□□ -1.12
GCFC2-201ENST00000321027 XP32Q5T750 250 aa8.06□□□□□ -1.12
GCFC2-201ENST00000321027 TNP1P09430 55 aa8.02□□□□□ -1.13
GCFC2-201ENST00000321027 HUWE1Q7Z6Z7 4374 aaKnown RBP7.98□□□□□ -1.13
GCFC2-201ENST00000321027 P0C880 135 aa7.93□□□□□ -1.14
GCFC2-201ENST00000321027 KRTAP10-8P60410 259 aa7.93□□□□□ -1.14
GCFC2-201ENST00000321027 LYSTQ99698 3801 aa7.92□□□□□ -1.14
GCFC2-201ENST00000321027 DNAH10Q8IVF4 4471 aa7.91□□□□□ -1.14
GCFC2-201ENST00000321027 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
GCFC2-201ENST00000321027 KRTAP3-1Q9BYR8 98 aa7.85□□□□□ -1.15
GCFC2-201ENST00000321027 PP632Q6XCG6 107 aa7.76□□□□□ -1.17
GCFC2-201ENST00000321027 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
GCFC2-201ENST00000321027 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
GCFC2-201ENST00000321027 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
GCFC2-201ENST00000321027 DNHD1Q96M86 4753 aa7.67□□□□□ -1.18
GCFC2-201ENST00000321027 DNAH7Q8WXX0 4024 aa7.66□□□□□ -1.18
GCFC2-201ENST00000321027 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
GCFC2-201ENST00000321027 KRTAP10-10P60014 251 aa7.63□□□□□ -1.19
GCFC2-201ENST00000321027 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
GCFC2-201ENST00000321027 DNAH3Q8TD57 4116 aa7.6□□□□□ -1.19
GCFC2-201ENST00000321027 KRTAP13-4Q3LI77 160 aa7.59□□□□□ -1.19
GCFC2-201ENST00000321027 KRTAP10-6P60371 365 aaPredicted RBP7.56□□□□□ -1.2
GCFC2-201ENST00000321027 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
GCFC2-201ENST00000321027 FRAS1Q86XX4 4008 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms