RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 CDC42SE1Q9NRR8 79 aa5.77□□□□□ -1.49
RPGR-201ENST00000318842 C8orf17Q9NRJ1 99 aa5.76□□□□□ -1.49
RPGR-201ENST00000318842 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
RPGR-201ENST00000318842 DNAH2Q9P225 4427 aa5.75□□□□□ -1.49
RPGR-201ENST00000318842 IGLV7-46A0A075B6I9 117 aa5.74□□□□□ -1.49
RPGR-201ENST00000318842 PRKDCP78527 4128 aaKnown RBP5.73□□□□□ -1.49
RPGR-201ENST00000318842 LOC101927531A0A1B0GV80 90 aa5.73□□□□□ -1.49
RPGR-201ENST00000318842 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
RPGR-201ENST00000318842 SPANXA2-OT1Q8N9U9 137 aa5.72□□□□□ -1.49
RPGR-201ENST00000318842 MDFIQ99750 246 aa5.72□□□□□ -1.49
RPGR-201ENST00000318842 Q6ZR54 194 aa5.72□□□□□ -1.49
RPGR-201ENST00000318842 PSORS1C2Q9UIG4 136 aa5.71□□□□□ -1.5
RPGR-201ENST00000318842 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
RPGR-201ENST00000318842 VPS13DQ5THJ4 4388 aa5.7□□□□□ -1.5
RPGR-201ENST00000318842 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
RPGR-201ENST00000318842 APLNQ9ULZ1 77 aa5.7□□□□□ -1.5
RPGR-201ENST00000318842 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
RPGR-201ENST00000318842 CDK2AP2O75956 126 aa5.69□□□□□ -1.5
RPGR-201ENST00000318842 SPRR1BP22528 89 aa5.69□□□□□ -1.5
RPGR-201ENST00000318842 LINC00313P59037 77 aa5.68□□□□□ -1.5
RPGR-201ENST00000318842 WWC2-AS2Q96NR7 200 aa5.68□□□□□ -1.5
RPGR-201ENST00000318842 DNAH11Q96DT5 4516 aa5.68□□□□□ -1.5
RPGR-201ENST00000318842 MRPL34Q9BQ48 92 aaKnown RBP5.67□□□□□ -1.5
RPGR-201ENST00000318842 NBDYA0A0U1RRE5 68 aa5.66□□□□□ -1.5
RPGR-201ENST00000318842 Q6ZRN7 208 aaPredicted RBP5.64□□□□□ -1.51
RPGR-201ENST00000318842 SPACA4Q8TDM5 124 aa5.64□□□□□ -1.51
RPGR-201ENST00000318842 ALMS1Q8TCU4 4167 aa5.64□□□□□ -1.51
RPGR-201ENST00000318842 H3BPC8 53 aa5.64□□□□□ -1.51
RPGR-201ENST00000318842 FLG2Q5D862 2391 aaPredicted RBP5.64□□□□□ -1.51
RPGR-201ENST00000318842 LINC01558Q9Y6Z2 57 aa5.63□□□□□ -1.51
RPGR-201ENST00000318842 LRP1BQ9NZR2 4599 aa5.62□□□□□ -1.51
RPGR-201ENST00000318842 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
RPGR-201ENST00000318842 RTL8CO15255 209 aa5.61□□□□□ -1.51
RPGR-201ENST00000318842 SPINK1P00995 79 aa5.61□□□□□ -1.51
RPGR-201ENST00000318842 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
RPGR-201ENST00000318842 PLAC8Q9NZF1 115 aa5.6□□□□□ -1.51
RPGR-201ENST00000318842 PLA2G1BP04054 148 aaKnown RBP5.6□□□□□ -1.51
RPGR-201ENST00000318842 DNHD1Q96M86 4753 aa5.6□□□□□ -1.51
RPGR-201ENST00000318842 A0A087WTM6 91 aa5.59□□□□□ -1.51
RPGR-201ENST00000318842 IGLV5-52A0A0A0MRZ9 124 aa5.59□□□□□ -1.51
RPGR-201ENST00000318842 IGKV2D-30A0A075B6S6 120 aa5.59□□□□□ -1.51
RPGR-201ENST00000318842 IGKV2-30P06310 120 aa5.59□□□□□ -1.51
RPGR-201ENST00000318842 C14orf177Q52M58 125 aa5.59□□□□□ -1.52
RPGR-201ENST00000318842 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.52
RPGR-201ENST00000318842 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
RPGR-201ENST00000318842 ZNF861PO60384 105 aa5.56□□□□□ -1.52
RPGR-201ENST00000318842 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
RPGR-201ENST00000318842 LINC00483Q53H64 154 aa5.55□□□□□ -1.52
RPGR-201ENST00000318842 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
RPGR-201ENST00000318842 DYNC2H1Q8NCM8 4307 aaKnown RBP5.54□□□□□ -1.52
RPGR-201ENST00000318842 Q8N1X5 172 aa5.53□□□□□ -1.52
RPGR-201ENST00000318842 DMBT1Q9UGM3 2413 aaPredicted RBP5.53□□□□□ -1.52
RPGR-201ENST00000318842 A0A1B0GU69 56 aa5.52□□□□□ -1.53
RPGR-201ENST00000318842 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
RPGR-201ENST00000318842 VPS13BQ7Z7G8 4022 aa5.51□□□□□ -1.53
RPGR-201ENST00000318842 IGLV7-43P04211 117 aa5.5□□□□□ -1.53
RPGR-201ENST00000318842 ACYP2P14621 99 aa5.5□□□□□ -1.53
RPGR-201ENST00000318842 LY6G6CO95867 125 aa5.49□□□□□ -1.53
RPGR-201ENST00000318842 KRTAP13-2Q52LG2 175 aa5.49□□□□□ -1.53
RPGR-201ENST00000318842 PKHD1P08F94 4074 aa5.48□□□□□ -1.53
RPGR-201ENST00000318842 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
RPGR-201ENST00000318842 ZNF706Q9Y5V0 76 aaPredicted RBP5.47□□□□□ -1.53
RPGR-201ENST00000318842 DMAC1Q96GE9 116 aa5.45□□□□□ -1.54
RPGR-201ENST00000318842 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
RPGR-201ENST00000318842 MIR22HGQ0VDD5 57 aa5.44□□□□□ -1.54
RPGR-201ENST00000318842 NUPR2A6NF83 97 aa5.42□□□□□ -1.54
RPGR-201ENST00000318842 FAT1Q14517 4588 aa5.4□□□□□ -1.55
RPGR-201ENST00000318842 C9orf92A6NGG3 77 aa5.4□□□□□ -1.55
RPGR-201ENST00000318842 C1orf134Q5TEV5 83 aa5.4□□□□□ -1.55
RPGR-201ENST00000318842 KRTAP16-1A8MUX0 517 aa5.39□□□□□ -1.55
RPGR-201ENST00000318842 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
RPGR-201ENST00000318842 FAM229AH3BQW9 127 aa5.38□□□□□ -1.55
RPGR-201ENST00000318842 TYMSOSQ8TAI1 123 aa5.38□□□□□ -1.55
RPGR-201ENST00000318842 PKD1P98161 4303 aa5.38□□□□□ -1.55
RPGR-201ENST00000318842 UQCR11O14957 56 aa5.36□□□□□ -1.55
RPGR-201ENST00000318842 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
RPGR-201ENST00000318842 SMR3BP02814 79 aaPredicted RBP5.35□□□□□ -1.55
RPGR-201ENST00000318842 ROMO1P60602 79 aa5.33□□□□□ -1.56
RPGR-201ENST00000318842 KRTAP1-4P0C5Y4 121 aa5.32□□□□□ -1.56
RPGR-201ENST00000318842 MYCBP2O75592 4640 aa5.32□□□□□ -1.56
RPGR-201ENST00000318842 SSBP3-AS1Q7Z2R9 100 aa5.31□□□□□ -1.56
RPGR-201ENST00000318842 H0YAA0 97 aa5.3□□□□□ -1.56
RPGR-201ENST00000318842 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
RPGR-201ENST00000318842 Q6ZSA8 131 aa5.29□□□□□ -1.56
RPGR-201ENST00000318842 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
RPGR-201ENST00000318842 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
RPGR-201ENST00000318842 LINC00304Q8N9R0 145 aa5.21□□□□□ -1.57
RPGR-201ENST00000318842 DYNC1H1Q14204 4646 aaKnown RBP5.21□□□□□ -1.57
RPGR-201ENST00000318842 KRTAP25-1Q3LHN0 102 aa5.21□□□□□ -1.58
RPGR-201ENST00000318842 P0C880 135 aa5.2□□□□□ -1.58
RPGR-201ENST00000318842 A0A0D9SG42 100 aa5.19□□□□□ -1.58
RPGR-201ENST00000318842 HSPG2P98160 4391 aa5.17□□□□□ -1.58
RPGR-201ENST00000318842 A0A1B0GU33 70 aa5.16□□□□□ -1.58
RPGR-201ENST00000318842 A8MUU9 505 aa5.16□□□□□ -1.58
RPGR-201ENST00000318842 LPAP08519 4548 aa5.16□□□□□ -1.58
RPGR-201ENST00000318842 SACSQ9NZJ4 4579 aa5.16□□□□□ -1.58
RPGR-201ENST00000318842 FAT3Q8TDW7 4589 aa5.13□□□□□ -1.59
RPGR-201ENST00000318842 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
RPGR-201ENST00000318842 APOBP04114 4563 aaKnown RBP5.11□□□□□ -1.59
RPGR-201ENST00000318842 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms