RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 A0A087WTM6 91 aa5.83□□□□□ -1.48
CAPN3-201ENST00000318023 Q6ZRN7 208 aaPredicted RBP5.83□□□□□ -1.48
CAPN3-201ENST00000318023 LRP1BQ9NZR2 4599 aa5.82□□□□□ -1.48
CAPN3-201ENST00000318023 A0A1B0GVY2 172 aa5.82□□□□□ -1.48
CAPN3-201ENST00000318023 SMR3BP02814 79 aaPredicted RBP5.82□□□□□ -1.48
CAPN3-201ENST00000318023 HECTD4Q9Y4D8 3996 aa5.82□□□□□ -1.48
CAPN3-201ENST00000318023 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
CAPN3-201ENST00000318023 DHRS4-AS1Q9P1J3 65 aa5.81□□□□□ -1.48
CAPN3-201ENST00000318023 H3BPC8 53 aa5.81□□□□□ -1.48
CAPN3-201ENST00000318023 CNBPP62633 177 aaKnown RBP5.81□□□□□ -1.48
CAPN3-201ENST00000318023 PRR34Q9NV39 138 aa5.81□□□□□ -1.48
CAPN3-201ENST00000318023 PKD1P98161 4303 aa5.81□□□□□ -1.48
CAPN3-201ENST00000318023 IGLV5-52A0A0A0MRZ9 124 aa5.8□□□□□ -1.48
CAPN3-201ENST00000318023 FAM168BA1KXE4 195 aa5.8□□□□□ -1.48
CAPN3-201ENST00000318023 IGFL1Q6UW32 110 aa5.8□□□□□ -1.48
CAPN3-201ENST00000318023 FAT1Q14517 4588 aa5.79□□□□□ -1.48
CAPN3-201ENST00000318023 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
CAPN3-201ENST00000318023 IGLV5-37A0A075B6J1 123 aa5.78□□□□□ -1.48
CAPN3-201ENST00000318023 HRES1P13985 223 aa5.78□□□□□ -1.48
CAPN3-201ENST00000318023 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
CAPN3-201ENST00000318023 C15orf56Q8N910 161 aa5.78□□□□□ -1.48
CAPN3-201ENST00000318023 RETNLBQ9BQ08 111 aa5.78□□□□□ -1.48
CAPN3-201ENST00000318023 KRTAP4-16G5E9R7 235 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-201ENST00000318023 CSAG1Q6PB30 78 aa5.76□□□□□ -1.49
CAPN3-201ENST00000318023 H0Y9J4 135 aa5.75□□□□□ -1.49
CAPN3-201ENST00000318023 KRTAP4-5Q9BYR2 181 aa5.75□□□□□ -1.49
CAPN3-201ENST00000318023 APOBP04114 4563 aaKnown RBP5.74□□□□□ -1.49
CAPN3-201ENST00000318023 KRTAP17-1Q9BYP8 105 aa5.74□□□□□ -1.49
CAPN3-201ENST00000318023 RYR1P21817 5038 aa5.73□□□□□ -1.49
CAPN3-201ENST00000318023 IGKV2-24A0A0C4DH68 120 aa5.73□□□□□ -1.49
CAPN3-201ENST00000318023 CHTF8P0CG12 524 aa5.72□□□□□ -1.49
CAPN3-201ENST00000318023 A8MWP4 228 aa5.72□□□□□ -1.49
CAPN3-201ENST00000318023 ZNF706Q9Y5V0 76 aaPredicted RBP5.71□□□□□ -1.49
CAPN3-201ENST00000318023 KRTAP26-1Q6PEX3 210 aa5.71□□□□□ -1.5
CAPN3-201ENST00000318023 MMP24-AS1A0A0U1RRL7 71 aa5.7□□□□□ -1.5
CAPN3-201ENST00000318023 SPRR1AP35321 89 aa5.7□□□□□ -1.5
CAPN3-201ENST00000318023 A0A096LNI7 61 aa5.7□□□□□ -1.5
CAPN3-201ENST00000318023 PRLHP81277 87 aa5.7□□□□□ -1.5
CAPN3-201ENST00000318023 PCLOQ9Y6V0 5065 aa5.7□□□□□ -1.5
CAPN3-201ENST00000318023 HSPG2P98160 4391 aa5.69□□□□□ -1.5
CAPN3-201ENST00000318023 HERC2O95714 4834 aa5.69□□□□□ -1.5
CAPN3-201ENST00000318023 ABCA13Q86UQ4 5058 aa5.69□□□□□ -1.5
CAPN3-201ENST00000318023 DMBT1Q9UGM3 2413 aaPredicted RBP5.69□□□□□ -1.5
CAPN3-201ENST00000318023 PANO1I0J062 215 aa5.69□□□□□ -1.5
CAPN3-201ENST00000318023 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
CAPN3-201ENST00000318023 LINC00472Q9H8W2 130 aa5.67□□□□□ -1.5
CAPN3-201ENST00000318023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.66□□□□□ -1.5
CAPN3-201ENST00000318023 MYCBP2O75592 4640 aa5.65□□□□□ -1.5
CAPN3-201ENST00000318023 REG3GQ6UW15 175 aa5.65□□□□□ -1.51
CAPN3-201ENST00000318023 CIRBP-AS1Q8TBR5 109 aa5.65□□□□□ -1.51
CAPN3-201ENST00000318023 Q5VSD8 79 aa5.64□□□□□ -1.51
CAPN3-201ENST00000318023 C14orf177Q52M58 125 aa5.63□□□□□ -1.51
CAPN3-201ENST00000318023 A0A1B0GU69 56 aa5.62□□□□□ -1.51
CAPN3-201ENST00000318023 CDK2AP2O75956 126 aa5.61□□□□□ -1.51
CAPN3-201ENST00000318023 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
CAPN3-201ENST00000318023 ASB16-AS1Q495Z4 193 aa5.61□□□□□ -1.51
CAPN3-201ENST00000318023 SPATA8Q6RVD6 105 aa5.6□□□□□ -1.51
CAPN3-201ENST00000318023 IGLV8-61A0A075B6I0 122 aa5.6□□□□□ -1.51
CAPN3-201ENST00000318023 Q8N1X5 172 aa5.6□□□□□ -1.51
CAPN3-201ENST00000318023 TP53AIP1Q9HCN2 124 aa5.59□□□□□ -1.51
CAPN3-201ENST00000318023 FAM229AH3BQW9 127 aa5.59□□□□□ -1.51
CAPN3-201ENST00000318023 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.52
CAPN3-201ENST00000318023 PLA2G2DQ9UNK4 145 aa5.59□□□□□ -1.52
CAPN3-201ENST00000318023 C8orf17Q9NRJ1 99 aa5.57□□□□□ -1.52
CAPN3-201ENST00000318023 TLX1NBP0CAT3 122 aa5.56□□□□□ -1.52
CAPN3-201ENST00000318023 LRP1Q07954 4544 aaKnown RBP5.55□□□□□ -1.52
CAPN3-201ENST00000318023 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
CAPN3-201ENST00000318023 HERC1Q15751 4861 aa5.55□□□□□ -1.52
CAPN3-201ENST00000318023 UQCR11O14957 56 aa5.55□□□□□ -1.52
CAPN3-201ENST00000318023 ROMO1P60602 79 aa5.55□□□□□ -1.52
CAPN3-201ENST00000318023 DNAH8Q96JB1 4490 aa5.55□□□□□ -1.52
CAPN3-201ENST00000318023 A0A087X002 238 aa5.54□□□□□ -1.52
CAPN3-201ENST00000318023 ACYP2P14621 99 aa5.54□□□□□ -1.52
CAPN3-201ENST00000318023 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
CAPN3-201ENST00000318023 Q6ZSA8 131 aa5.54□□□□□ -1.52
CAPN3-201ENST00000318023 ZNF861PO60384 105 aa5.53□□□□□ -1.52
CAPN3-201ENST00000318023 Q96NJ1 140 aa5.53□□□□□ -1.52
CAPN3-201ENST00000318023 Q5W150 140 aa5.52□□□□□ -1.53
CAPN3-201ENST00000318023 SPACA4Q8TDM5 124 aa5.52□□□□□ -1.53
CAPN3-201ENST00000318023 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
CAPN3-201ENST00000318023 KRTAP11-1Q8IUC1 163 aa5.5□□□□□ -1.53
CAPN3-201ENST00000318023 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
CAPN3-201ENST00000318023 J3QL48 77 aa5.49□□□□□ -1.53
CAPN3-201ENST00000318023 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
CAPN3-201ENST00000318023 DMAC1Q96GE9 116 aa5.46□□□□□ -1.54
CAPN3-201ENST00000318023 KRTAP25-1Q3LHN0 102 aa5.45□□□□□ -1.54
CAPN3-201ENST00000318023 P0C880 135 aa5.45□□□□□ -1.54
CAPN3-201ENST00000318023 CRIPTQ9P021 101 aa5.45□□□□□ -1.54
CAPN3-201ENST00000318023 PSORS1C2Q9UIG4 136 aa5.44□□□□□ -1.54
CAPN3-201ENST00000318023 SPRR1BP22528 89 aa5.43□□□□□ -1.54
CAPN3-201ENST00000318023 SPINK6Q6UWN8 80 aa5.43□□□□□ -1.54
CAPN3-201ENST00000318023 KRTAP10-4P60372 401 aaPredicted RBP5.41□□□□□ -1.54
CAPN3-201ENST00000318023 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
CAPN3-201ENST00000318023 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.54
CAPN3-201ENST00000318023 A8MUU9 505 aa5.4□□□□□ -1.54
CAPN3-201ENST00000318023 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
CAPN3-201ENST00000318023 SPINK1P00995 79 aa5.37□□□□□ -1.55
CAPN3-201ENST00000318023 IGLV7-43P04211 117 aa5.37□□□□□ -1.55
CAPN3-201ENST00000318023 LINC00304Q8N9R0 145 aa5.37□□□□□ -1.55
CAPN3-201ENST00000318023 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms