RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 TNP2Q05952 138 aa6.66□□□□□ -1.34
HNF4A-201ENST00000316099 VWFP04275 2813 aa6.65□□□□□ -1.34
HNF4A-201ENST00000316099 COX6B2Q6YFQ2 88 aa6.65□□□□□ -1.35
HNF4A-201ENST00000316099 A0A1B0GU33 70 aa6.63□□□□□ -1.35
HNF4A-201ENST00000316099 A0A0D9SG42 100 aa6.63□□□□□ -1.35
HNF4A-201ENST00000316099 FBN1P35555 2871 aaKnown RBP6.62□□□□□ -1.35
HNF4A-201ENST00000316099 SPRR1BP22528 89 aa6.6□□□□□ -1.35
HNF4A-201ENST00000316099 PRAC1Q96KF2 57 aa6.6□□□□□ -1.35
HNF4A-201ENST00000316099 LINC00472Q9H8W2 130 aa6.6□□□□□ -1.35
HNF4A-201ENST00000316099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
HNF4A-201ENST00000316099 H3BS24 57 aa6.59□□□□□ -1.35
HNF4A-201ENST00000316099 SPINK7P58062 85 aa6.59□□□□□ -1.35
HNF4A-201ENST00000316099 NBEAL1Q6ZS30 2694 aa6.59□□□□□ -1.35
HNF4A-201ENST00000316099 LUZP6Q538Z0 58 aa6.55□□□□□ -1.36
HNF4A-201ENST00000316099 ASB16-AS1Q495Z4 193 aa6.55□□□□□ -1.36
HNF4A-201ENST00000316099 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
HNF4A-201ENST00000316099 CSAG1Q6PB30 78 aa6.54□□□□□ -1.36
HNF4A-201ENST00000316099 Q5W150 140 aa6.54□□□□□ -1.36
HNF4A-201ENST00000316099 ZCCHC13Q8WW36 166 aaKnown RBP6.52□□□□□ -1.37
HNF4A-201ENST00000316099 TENM3Q9P273 2699 aa6.51□□□□□ -1.37
HNF4A-201ENST00000316099 PANO1I0J062 215 aa6.49□□□□□ -1.37
HNF4A-201ENST00000316099 PLAC8Q9NZF1 115 aa6.49□□□□□ -1.37
HNF4A-201ENST00000316099 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
HNF4A-201ENST00000316099 Q6ZR54 194 aa6.49□□□□□ -1.37
HNF4A-201ENST00000316099 KRTAP7-1Q8IUC3 87 aa6.49□□□□□ -1.37
HNF4A-201ENST00000316099 KRTAP4-16G5E9R7 235 aaPredicted RBP6.48□□□□□ -1.37
HNF4A-201ENST00000316099 KRTAP29-1A8MX34 341 aaPredicted RBP6.45□□□□□ -1.38
HNF4A-201ENST00000316099 KRTAP10-2P60368 255 aa6.44□□□□□ -1.38
HNF4A-201ENST00000316099 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
HNF4A-201ENST00000316099 KRTAP11-1Q8IUC1 163 aa6.42□□□□□ -1.38
HNF4A-201ENST00000316099 M0R2T5 61 aa6.42□□□□□ -1.38
HNF4A-201ENST00000316099 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
HNF4A-201ENST00000316099 S4R3F8 94 aa6.4□□□□□ -1.38
HNF4A-201ENST00000316099 PKD1L1Q8TDX9 2849 aa6.4□□□□□ -1.39
HNF4A-201ENST00000316099 ROMO1P60602 79 aa6.4□□□□□ -1.39
HNF4A-201ENST00000316099 STAB2Q8WWQ8 2551 aa6.39□□□□□ -1.39
HNF4A-201ENST00000316099 LCE6AA0A183 80 aa6.39□□□□□ -1.39
HNF4A-201ENST00000316099 A6NN06 94 aa6.38□□□□□ -1.39
HNF4A-201ENST00000316099 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
HNF4A-201ENST00000316099 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
HNF4A-201ENST00000316099 A0A0A0MQY5 61 aa6.37□□□□□ -1.39
HNF4A-201ENST00000316099 H1FX-AS1Q4G0G2 97 aa6.37□□□□□ -1.39
HNF4A-201ENST00000316099 Q6ZSA8 131 aa6.36□□□□□ -1.39
HNF4A-201ENST00000316099 SPATA8Q6RVD6 105 aa6.36□□□□□ -1.39
HNF4A-201ENST00000316099 RPL37P61927 97 aaKnown RBP6.36□□□□□ -1.39
HNF4A-201ENST00000316099 CAMK2N1Q7Z7J9 78 aa6.35□□□□□ -1.39
HNF4A-201ENST00000316099 Q5VSD8 79 aa6.3□□□□□ -1.4
HNF4A-201ENST00000316099 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
HNF4A-201ENST00000316099 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
HNF4A-201ENST00000316099 KRTAP25-1Q3LHN0 102 aa6.23□□□□□ -1.41
HNF4A-201ENST00000316099 A0A087X002 238 aa6.22□□□□□ -1.41
HNF4A-201ENST00000316099 R4GN34 69 aa6.21□□□□□ -1.41
HNF4A-201ENST00000316099 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
HNF4A-201ENST00000316099 ANK2Q01484 3957 aa6.19□□□□□ -1.42
HNF4A-201ENST00000316099 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
HNF4A-201ENST00000316099 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
HNF4A-201ENST00000316099 KRTAP16-1A8MUX0 517 aa6.14□□□□□ -1.43
HNF4A-201ENST00000316099 TENM2Q9NT68 2774 aa6.14□□□□□ -1.43
HNF4A-201ENST00000316099 M0QZ58 72 aa6.12□□□□□ -1.43
HNF4A-201ENST00000316099 A8MU10 97 aa6.12□□□□□ -1.43
HNF4A-201ENST00000316099 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
HNF4A-201ENST00000316099 RPS29P62273 56 aaKnown RBP6.1□□□□□ -1.43
HNF4A-201ENST00000316099 KRTAP13-2Q52LG2 175 aa6.09□□□□□ -1.44
HNF4A-201ENST00000316099 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
HNF4A-201ENST00000316099 TGP01266 2768 aa6.04□□□□□ -1.44
HNF4A-201ENST00000316099 PLECQ15149 4684 aaKnown RBP6□□□□□ -1.45
HNF4A-201ENST00000316099 CSMD3Q7Z407 3707 aa6□□□□□ -1.45
HNF4A-201ENST00000316099 DNAH10Q8IVF4 4471 aa6□□□□□ -1.45
HNF4A-201ENST00000316099 COL7A1Q02388 2944 aa6□□□□□ -1.45
HNF4A-201ENST00000316099 KRTAP1-4P0C5Y4 121 aa5.98□□□□□ -1.45
HNF4A-201ENST00000316099 NDUFAF8A1L188 74 aa5.97□□□□□ -1.45
HNF4A-201ENST00000316099 PRKDCP78527 4128 aaKnown RBP5.96□□□□□ -1.46
HNF4A-201ENST00000316099 LYSTQ99698 3801 aa5.96□□□□□ -1.46
HNF4A-201ENST00000316099 MEGF8Q7Z7M0 2845 aa5.95□□□□□ -1.46
HNF4A-201ENST00000316099 FBN3Q75N90 2809 aa5.95□□□□□ -1.46
HNF4A-201ENST00000316099 A0A1B0GVY2 172 aa5.94□□□□□ -1.46
HNF4A-201ENST00000316099 A8MUU9 505 aa5.94□□□□□ -1.46
HNF4A-201ENST00000316099 STARD9Q9P2P6 4700 aa5.93□□□□□ -1.46
HNF4A-201ENST00000316099 DNAH1Q9P2D7 4330 aa5.93□□□□□ -1.46
HNF4A-201ENST00000316099 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
HNF4A-201ENST00000316099 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
HNF4A-201ENST00000316099 VPS13DQ5THJ4 4388 aa5.9□□□□□ -1.47
HNF4A-201ENST00000316099 DYNC2H1Q8NCM8 4307 aaKnown RBP5.88□□□□□ -1.47
HNF4A-201ENST00000316099 DNAH7Q8WXX0 4024 aa5.87□□□□□ -1.47
HNF4A-201ENST00000316099 C20orf166-AS1Q96NR2 134 aa5.86□□□□□ -1.47
HNF4A-201ENST00000316099 KMT2AQ03164 3969 aa5.86□□□□□ -1.47
HNF4A-201ENST00000316099 DNHD1Q96M86 4753 aa5.81□□□□□ -1.48
HNF4A-201ENST00000316099 SRRM2Q9UQ35 2752 aaKnown RBP5.8□□□□□ -1.48
HNF4A-201ENST00000316099 H0YAA0 97 aa5.77□□□□□ -1.49
HNF4A-201ENST00000316099 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
HNF4A-201ENST00000316099 PP632Q6XCG6 107 aa5.74□□□□□ -1.49
HNF4A-201ENST00000316099 TNP1P09430 55 aa5.73□□□□□ -1.49
HNF4A-201ENST00000316099 DMBT1Q9UGM3 2413 aaPredicted RBP5.71□□□□□ -1.5
HNF4A-201ENST00000316099 DNAH2Q9P225 4427 aa5.7□□□□□ -1.5
HNF4A-201ENST00000316099 DNAH6Q9C0G6 4158 aa5.69□□□□□ -1.5
HNF4A-201ENST00000316099 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
HNF4A-201ENST00000316099 HECTD4Q9Y4D8 3996 aa5.69□□□□□ -1.5
HNF4A-201ENST00000316099 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
HNF4A-201ENST00000316099 DNAH11Q96DT5 4516 aa5.67□□□□□ -1.5
HNF4A-201ENST00000316099 P0C880 135 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms