RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KRTAP4-5Q9BYR2 181 aa4.52□□□□□ -1.69
CNOT4-201ENST00000315544 A8MWP4 228 aa4.51□□□□□ -1.69
CNOT4-201ENST00000315544 Q5VV11 94 aa4.51□□□□□ -1.69
CNOT4-201ENST00000315544 IGLV7-46A0A075B6I9 117 aa4.5□□□□□ -1.69
CNOT4-201ENST00000315544 KRTAP10-2P60368 255 aa4.5□□□□□ -1.69
CNOT4-201ENST00000315544 HCG22E2RYF7 251 aa4.5□□□□□ -1.69
CNOT4-201ENST00000315544 PHF5AQ7RTV0 110 aaKnown RBP4.5□□□□□ -1.69
CNOT4-201ENST00000315544 SMIM26A0A096LP01 95 aa4.5□□□□□ -1.69
CNOT4-201ENST00000315544 A0A087WTM6 91 aa4.49□□□□□ -1.69
CNOT4-201ENST00000315544 IGLV5-52A0A0A0MRZ9 124 aa4.49□□□□□ -1.69
CNOT4-201ENST00000315544 HRCT1Q6UXD1 115 aa4.49□□□□□ -1.69
CNOT4-201ENST00000315544 Q8N1X5 172 aa4.49□□□□□ -1.69
CNOT4-201ENST00000315544 KRTAP13-2Q52LG2 175 aa4.49□□□□□ -1.69
CNOT4-201ENST00000315544 CD164Q04900 197 aa4.48□□□□□ -1.69
CNOT4-201ENST00000315544 Q5W150 140 aa4.48□□□□□ -1.69
CNOT4-201ENST00000315544 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
CNOT4-201ENST00000315544 LAMTOR3Q9UHA4 124 aa4.47□□□□□ -1.69
CNOT4-201ENST00000315544 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
CNOT4-201ENST00000315544 HERC1Q15751 4861 aa4.46□□□□□ -1.7
CNOT4-201ENST00000315544 H3BPC8 53 aa4.46□□□□□ -1.7
CNOT4-201ENST00000315544 PRLHP81277 87 aa4.46□□□□□ -1.7
CNOT4-201ENST00000315544 FUSP35637 526 aaKnown RBP eCLIP4.45□□□□□ -1.7
CNOT4-201ENST00000315544 KRTAP10-1P60331 282 aa4.44□□□□□ -1.7
CNOT4-201ENST00000315544 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
CNOT4-201ENST00000315544 HAMPP81172 84 aa4.43□□□□□ -1.7
CNOT4-201ENST00000315544 HTN3P15516 51 aa4.43□□□□□ -1.7
CNOT4-201ENST00000315544 LCA10Q71F78 164 aa4.43□□□□□ -1.7
CNOT4-201ENST00000315544 MT1HL1P0DM35 61 aa4.43□□□□□ -1.7
CNOT4-201ENST00000315544 FAM30AQ9NZY2 134 aa4.43□□□□□ -1.7
CNOT4-201ENST00000315544 IGKV2-24A0A0C4DH68 120 aa4.4□□□□□ -1.7
CNOT4-201ENST00000315544 A6NN06 94 aa4.39□□□□□ -1.71
CNOT4-201ENST00000315544 Q75L30 129 aa4.39□□□□□ -1.71
CNOT4-201ENST00000315544 PSORS1C2Q9UIG4 136 aa4.39□□□□□ -1.71
CNOT4-201ENST00000315544 LY6G6CO95867 125 aa4.38□□□□□ -1.71
CNOT4-201ENST00000315544 KRTAP3-1Q9BYR8 98 aa4.38□□□□□ -1.71
CNOT4-201ENST00000315544 A0A087WSZ3 146 aa4.38□□□□□ -1.71
CNOT4-201ENST00000315544 H3BS24 57 aa4.37□□□□□ -1.71
CNOT4-201ENST00000315544 NKAPP1Q8N9T2 125 aa4.37□□□□□ -1.71
CNOT4-201ENST00000315544 HRES1P13985 223 aa4.37□□□□□ -1.71
CNOT4-201ENST00000315544 LINC01558Q9Y6Z2 57 aa4.37□□□□□ -1.71
CNOT4-201ENST00000315544 A0A1B0GVX0 72 aa4.36□□□□□ -1.71
CNOT4-201ENST00000315544 C8orf17Q9NRJ1 99 aa4.36□□□□□ -1.71
CNOT4-201ENST00000315544 DEFB116Q30KQ4 102 aa4.34□□□□□ -1.71
CNOT4-201ENST00000315544 C1orf195Q5TG92 126 aa4.34□□□□□ -1.71
CNOT4-201ENST00000315544 ZNF861PO60384 105 aa4.34□□□□□ -1.71
CNOT4-201ENST00000315544 KRTAP10-8P60410 259 aa4.34□□□□□ -1.71
CNOT4-201ENST00000315544 DEFB105AQ8NG35 78 aa4.34□□□□□ -1.71
CNOT4-201ENST00000315544 FAM229AH3BQW9 127 aa4.34□□□□□ -1.72
CNOT4-201ENST00000315544 LRP2P98164 4655 aa4.33□□□□□ -1.72
CNOT4-201ENST00000315544 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
CNOT4-201ENST00000315544 IGLV7-43P04211 117 aa4.3□□□□□ -1.72
CNOT4-201ENST00000315544 RPS29P62273 56 aaKnown RBP4.3□□□□□ -1.72
CNOT4-201ENST00000315544 CASC2Q6XLA1 102 aa4.3□□□□□ -1.72
CNOT4-201ENST00000315544 C14orf177Q52M58 125 aa4.29□□□□□ -1.72
CNOT4-201ENST00000315544 TP53AIP1Q9HCN2 124 aa4.28□□□□□ -1.72
CNOT4-201ENST00000315544 H0Y9P7 68 aa4.27□□□□□ -1.73
CNOT4-201ENST00000315544 KRTAP19-2Q3LHN2 52 aa4.27□□□□□ -1.73
CNOT4-201ENST00000315544 MPLKIPQ8TAP9 179 aa4.27□□□□□ -1.73
CNOT4-201ENST00000315544 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
CNOT4-201ENST00000315544 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
CNOT4-201ENST00000315544 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
CNOT4-201ENST00000315544 NDUFB1O75438 58 aa4.26□□□□□ -1.73
CNOT4-201ENST00000315544 COA5Q86WW8 74 aa4.25□□□□□ -1.73
CNOT4-201ENST00000315544 MRPL34Q9BQ48 92 aaKnown RBP4.25□□□□□ -1.73
CNOT4-201ENST00000315544 UBE2BP63146 152 aa4.25□□□□□ -1.73
CNOT4-201ENST00000315544 A8MUN3 132 aa4.24□□□□□ -1.73
CNOT4-201ENST00000315544 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
CNOT4-201ENST00000315544 UBE2AP49459 152 aa4.23□□□□□ -1.73
CNOT4-201ENST00000315544 PKIGQ9Y2B9 76 aa4.23□□□□□ -1.73
CNOT4-201ENST00000315544 Q5VSD8 79 aa4.23□□□□□ -1.73
CNOT4-201ENST00000315544 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
CNOT4-201ENST00000315544 LCE2BO14633 110 aa4.22□□□□□ -1.73
CNOT4-201ENST00000315544 LCE2CQ5TA81 110 aa4.22□□□□□ -1.73
CNOT4-201ENST00000315544 UBE2DNLQ8IWF7 75 aa4.22□□□□□ -1.73
CNOT4-201ENST00000315544 SPINK7P58062 85 aa4.2□□□□□ -1.74
CNOT4-201ENST00000315544 A8MUU9 505 aa4.2□□□□□ -1.74
CNOT4-201ENST00000315544 WFDC13Q8IUB5 93 aa4.2□□□□□ -1.74
CNOT4-201ENST00000315544 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
CNOT4-201ENST00000315544 SSBP3-AS1Q7Z2R9 100 aa4.19□□□□□ -1.74
CNOT4-201ENST00000315544 RNF213Q63HN8 5207 aa4.19□□□□□ -1.74
CNOT4-201ENST00000315544 PLA2G1BP04054 148 aaKnown RBP4.19□□□□□ -1.74
CNOT4-201ENST00000315544 CDC42SE1Q9NRR8 79 aa4.18□□□□□ -1.74
CNOT4-201ENST00000315544 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
CNOT4-201ENST00000315544 SPINK6Q6UWN8 80 aa4.18□□□□□ -1.74
CNOT4-201ENST00000315544 LIMD2Q9BT23 127 aa4.17□□□□□ -1.74
CNOT4-201ENST00000315544 IGHV6-1A0A0B4J1U7 121 aa4.15□□□□□ -1.74
CNOT4-201ENST00000315544 C8orf87E5RJ46 101 aa4.15□□□□□ -1.74
CNOT4-201ENST00000315544 IGKV2D-30A0A075B6S6 120 aa4.14□□□□□ -1.75
CNOT4-201ENST00000315544 UBR4Q5T4S7 5183 aa4.14□□□□□ -1.75
CNOT4-201ENST00000315544 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-201ENST00000315544 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
CNOT4-201ENST00000315544 ATP11AUNQ6ZP68 121 aa4.12□□□□□ -1.75
CNOT4-201ENST00000315544 FLG2Q5D862 2391 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-201ENST00000315544 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
CNOT4-201ENST00000315544 H0YAA0 97 aa4.1□□□□□ -1.75
CNOT4-201ENST00000315544 PSPHP1O15172 72 aa4.1□□□□□ -1.75
CNOT4-201ENST00000315544 V9GYY9 64 aa4.1□□□□□ -1.75
CNOT4-201ENST00000315544 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.76
CNOT4-201ENST00000315544 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
CNOT4-201ENST00000315544 PRR4Q16378 134 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms