RNA–Protein interactions for RNA: ENST00000312123.13

GAPVD1-203, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GAPVD1, Length 4,320 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-203ENST00000312123 LAMA5O15230 3695 aa4.24□□□□□ -1.73
GAPVD1-203ENST00000312123 SPINK7P58062 85 aa4.24□□□□□ -1.73
GAPVD1-203ENST00000312123 Q75L30 129 aa4.24□□□□□ -1.73
GAPVD1-203ENST00000312123 KRTAP10-2P60368 255 aa4.23□□□□□ -1.73
GAPVD1-203ENST00000312123 LINC01558Q9Y6Z2 57 aa4.23□□□□□ -1.73
GAPVD1-203ENST00000312123 A0A1B0GU33 70 aa4.23□□□□□ -1.73
GAPVD1-203ENST00000312123 KRTAP11-1Q8IUC1 163 aa4.22□□□□□ -1.73
GAPVD1-203ENST00000312123 KRTAP10-1P60331 282 aa4.22□□□□□ -1.73
GAPVD1-203ENST00000312123 RBM12B-AS1Q9P1G2 102 aa4.22□□□□□ -1.73
GAPVD1-203ENST00000312123 ZCCHC13Q8WW36 166 aaKnown RBP4.21□□□□□ -1.74
GAPVD1-203ENST00000312123 A0A087X002 238 aa4.2□□□□□ -1.74
GAPVD1-203ENST00000312123 NOTCH2NLQ7Z3S9 236 aa4.2□□□□□ -1.74
GAPVD1-203ENST00000312123 CUBNO60494 3623 aa4.2□□□□□ -1.74
GAPVD1-203ENST00000312123 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
GAPVD1-203ENST00000312123 ZFHX4Q86UP3 3567 aa4.19□□□□□ -1.74
GAPVD1-203ENST00000312123 KRTAP29-1A8MX34 341 aaPredicted RBP4.19□□□□□ -1.74
GAPVD1-203ENST00000312123 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
GAPVD1-203ENST00000312123 Q6ZSA8 131 aa4.19□□□□□ -1.74
GAPVD1-203ENST00000312123 TGP01266 2768 aa4.18□□□□□ -1.74
GAPVD1-203ENST00000312123 CSAG1Q6PB30 78 aa4.14□□□□□ -1.75
GAPVD1-203ENST00000312123 LINC00483Q53H64 154 aa4.13□□□□□ -1.75
GAPVD1-203ENST00000312123 Q6ZR54 194 aa4.13□□□□□ -1.75
GAPVD1-203ENST00000312123 CAMK2N1Q7Z7J9 78 aa4.12□□□□□ -1.75
GAPVD1-203ENST00000312123 DMAC1Q96GE9 116 aa4.12□□□□□ -1.75
GAPVD1-203ENST00000312123 CSMD1Q96PZ7 3565 aa4.11□□□□□ -1.75
GAPVD1-203ENST00000312123 SPENQ96T58 3664 aaKnown RBP4.11□□□□□ -1.75
GAPVD1-203ENST00000312123 Q6ZRN7 208 aaPredicted RBP4.1□□□□□ -1.75
GAPVD1-203ENST00000312123 A8MU10 97 aa4.09□□□□□ -1.75
GAPVD1-203ENST00000312123 OTOGQ6ZRI0 2925 aa4.08□□□□□ -1.76
GAPVD1-203ENST00000312123 S4R3F8 94 aa4.08□□□□□ -1.76
GAPVD1-203ENST00000312123 Q5VSD8 79 aa4.07□□□□□ -1.76
GAPVD1-203ENST00000312123 SPATA8Q6RVD6 105 aa4.07□□□□□ -1.76
GAPVD1-203ENST00000312123 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
GAPVD1-203ENST00000312123 LCE6AA0A183 80 aa4.06□□□□□ -1.76
GAPVD1-203ENST00000312123 R4GN34 69 aa4.05□□□□□ -1.76
GAPVD1-203ENST00000312123 M0R2T5 61 aa4.05□□□□□ -1.76
GAPVD1-203ENST00000312123 ZFHX3Q15911 3703 aa4.05□□□□□ -1.76
GAPVD1-203ENST00000312123 SMG1Q96Q15 3661 aaKnown RBP4.04□□□□□ -1.76
GAPVD1-203ENST00000312123 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
GAPVD1-203ENST00000312123 KRTAP13-2Q52LG2 175 aa4.04□□□□□ -1.76
GAPVD1-203ENST00000312123 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
GAPVD1-203ENST00000312123 KRTAP13-1Q8IUC0 172 aa4.03□□□□□ -1.76
GAPVD1-203ENST00000312123 SVEP1Q4LDE5 3571 aa4.03□□□□□ -1.76
GAPVD1-203ENST00000312123 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
GAPVD1-203ENST00000312123 H3BS24 57 aa4□□□□□ -1.77
GAPVD1-203ENST00000312123 ADM2Q7Z4H4 148 aa3.99□□□□□ -1.77
GAPVD1-203ENST00000312123 M0QZ58 72 aa3.99□□□□□ -1.77
GAPVD1-203ENST00000312123 ROMO1P60602 79 aa3.97□□□□□ -1.77
GAPVD1-203ENST00000312123 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
GAPVD1-203ENST00000312123 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
GAPVD1-203ENST00000312123 SEC61BP60468 96 aaKnown RBP3.97□□□□□ -1.77
GAPVD1-203ENST00000312123 CSMD2Q7Z408 3487 aa3.96□□□□□ -1.78
GAPVD1-203ENST00000312123 COL7A1Q02388 2944 aa3.95□□□□□ -1.78
GAPVD1-203ENST00000312123 A6NN06 94 aa3.95□□□□□ -1.78
GAPVD1-203ENST00000312123 NBPF19A0A087WUL8 3843 aa3.92□□□□□ -1.78
GAPVD1-203ENST00000312123 MEGF8Q7Z7M0 2845 aa3.86□□□□□ -1.79
GAPVD1-203ENST00000312123 RPS29P62273 56 aaKnown RBP3.86□□□□□ -1.79
GAPVD1-203ENST00000312123 A8MUU9 505 aa3.85□□□□□ -1.79
GAPVD1-203ENST00000312123 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
GAPVD1-203ENST00000312123 KRTAP25-1Q3LHN0 102 aa3.85□□□□□ -1.79
GAPVD1-203ENST00000312123 A0A0A0MQY5 61 aa3.8□□□□□ -1.8
GAPVD1-203ENST00000312123 C20orf166-AS1Q96NR2 134 aa3.8□□□□□ -1.8
GAPVD1-203ENST00000312123 VPS13CQ709C8 3753 aa3.78□□□□□ -1.8
GAPVD1-203ENST00000312123 TRRAPQ9Y4A5 3859 aa3.78□□□□□ -1.8
GAPVD1-203ENST00000312123 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
GAPVD1-203ENST00000312123 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
GAPVD1-203ENST00000312123 C10orf95Q9H7T3 257 aa3.76□□□□□ -1.81
GAPVD1-203ENST00000312123 KRTAP16-1A8MUX0 517 aa3.74□□□□□ -1.81
GAPVD1-203ENST00000312123 H0YAA0 97 aa3.74□□□□□ -1.81
GAPVD1-203ENST00000312123 XP32Q5T750 250 aa3.74□□□□□ -1.81
GAPVD1-203ENST00000312123 ANK3Q12955 4377 aaKnown RBP3.74□□□□□ -1.81
GAPVD1-203ENST00000312123 KRTAP21-3Q3LHN1 58 aa3.74□□□□□ -1.81
GAPVD1-203ENST00000312123 P0C880 135 aa3.69□□□□□ -1.82
GAPVD1-203ENST00000312123 AKAP9Q99996 3911 aa3.68□□□□□ -1.82
GAPVD1-203ENST00000312123 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
GAPVD1-203ENST00000312123 KRTAP13-3Q3SY46 172 aa3.66□□□□□ -1.82
GAPVD1-203ENST00000312123 TNP1P09430 55 aa3.65□□□□□ -1.83
GAPVD1-203ENST00000312123 ZNF469Q96JG9 3925 aaPredicted RBP3.62□□□□□ -1.83
GAPVD1-203ENST00000312123 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
GAPVD1-203ENST00000312123 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
GAPVD1-203ENST00000312123 CSMD3Q7Z407 3707 aa3.56□□□□□ -1.84
GAPVD1-203ENST00000312123 KRTAP3-1Q9BYR8 98 aa3.53□□□□□ -1.84
GAPVD1-203ENST00000312123 KRTAP10-10P60014 251 aa3.52□□□□□ -1.85
GAPVD1-203ENST00000312123 PP632Q6XCG6 107 aa3.51□□□□□ -1.85
GAPVD1-203ENST00000312123 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
GAPVD1-203ENST00000312123 KRTAP12-1P59990 96 aa3.45□□□□□ -1.86
GAPVD1-203ENST00000312123 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
GAPVD1-203ENST00000312123 ANK2Q01484 3957 aa3.43□□□□□ -1.86
GAPVD1-203ENST00000312123 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
GAPVD1-203ENST00000312123 CMYA5Q8N3K9 4069 aa3.4□□□□□ -1.86
GAPVD1-203ENST00000312123 DNAH3Q8TD57 4116 aa3.4□□□□□ -1.87
GAPVD1-203ENST00000312123 HUWE1Q7Z6Z7 4374 aaKnown RBP3.36□□□□□ -1.87
GAPVD1-203ENST00000312123 DNAH9Q9NYC9 4486 aa3.35□□□□□ -1.87
GAPVD1-203ENST00000312123 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
GAPVD1-203ENST00000312123 PRO2289Q9P1D8 64 aa3.32□□□□□ -1.88
GAPVD1-203ENST00000312123 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
GAPVD1-203ENST00000312123 KRTAP3-2Q9BYR7 98 aa3.3□□□□□ -1.88
GAPVD1-203ENST00000312123 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
GAPVD1-203ENST00000312123 DNAH1Q9P2D7 4330 aa3.29□□□□□ -1.88
GAPVD1-203ENST00000312123 KRTAP10-4P60372 401 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms