RNA–Protein interactions for RNA: ENST00000309096.4

GPBP1-202, Transcript of GC-rich promoter binding protein 1, humanhuman

TSL 2

Gene GPBP1, Length 1,385 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPBP1-202ENST00000309096 C9orf92A6NGG3 77 aa0.42□□□□□ -2.34
GPBP1-202ENST00000309096 TNRC18O15417 2968 aaPredicted RBP0.42□□□□□ -2.34
GPBP1-202ENST00000309096 NSD1Q96L73 2696 aaPredicted RBP0.42□□□□□ -2.34
GPBP1-202ENST00000309096 CELSR1Q9NYQ6 3014 aa0.41□□□□□ -2.34
GPBP1-202ENST00000309096 SPRR2DP22532 72 aa0.41□□□□□ -2.34
GPBP1-202ENST00000309096 HECTD4Q9Y4D8 3996 aa0.4□□□□□ -2.34
GPBP1-202ENST00000309096 KMT2DO14686 5537 aa0.4□□□□□ -2.34
GPBP1-202ENST00000309096 HRNRQ86YZ3 2850 aaPredicted RBP0.4□□□□□ -2.35
GPBP1-202ENST00000309096 SMIM2Q9BVW6 85 aa0.4□□□□□ -2.35
GPBP1-202ENST00000309096 KIF21BO75037 1637 aa0.39□□□□□ -2.35
GPBP1-202ENST00000309096 LYSTQ99698 3801 aa0.39□□□□□ -2.35
GPBP1-202ENST00000309096 DDX60Q8IY21 1712 aaKnown RBP0.39□□□□□ -2.35
GPBP1-202ENST00000309096 WFDC10BQ8IUB3 73 aa0.39□□□□□ -2.35
GPBP1-202ENST00000309096 KAAG1Q9UBP8 84 aa0.39□□□□□ -2.35
GPBP1-202ENST00000309096 FAM208AQ9UK61 1670 aaKnown RBP0.39□□□□□ -2.35
GPBP1-202ENST00000309096 MTORP42345 2549 aa0.38□□□□□ -2.35
GPBP1-202ENST00000309096 ZZEF1O43149 2961 aa0.38□□□□□ -2.35
GPBP1-202ENST00000309096 FSIP2Q5CZC0 6907 aa0.38□□□□□ -2.35
GPBP1-202ENST00000309096 SRRM2Q9UQ35 2752 aaKnown RBP0.38□□□□□ -2.35
GPBP1-202ENST00000309096 SETD2Q9BYW2 2564 aaPredicted RBP0.38□□□□□ -2.35
GPBP1-202ENST00000309096 VPS13BQ7Z7G8 4022 aa0.38□□□□□ -2.35
GPBP1-202ENST00000309096 LRRK2Q5S007 2527 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 SPTBN4Q9H254 2564 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 PKD1P98161 4303 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 H3BNG1 76 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 SPRR2BP35325 72 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 IQGAP1P46940 1657 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 GCN1Q92616 2671 aaKnown RBP0.37□□□□□ -2.35
GPBP1-202ENST00000309096 SPG11Q96JI7 2443 aa0.37□□□□□ -2.35
GPBP1-202ENST00000309096 ANKRD11Q6UB99 2663 aaPredicted RBP0.36□□□□□ -2.35
GPBP1-202ENST00000309096 UTP20O75691 2785 aaKnown RBP0.36□□□□□ -2.35
GPBP1-202ENST00000309096 DEFB131AP59861 70 aa0.36□□□□□ -2.35
GPBP1-202ENST00000309096 EPG5Q9HCE0 2579 aa0.36□□□□□ -2.35
GPBP1-202ENST00000309096 TRPM2O94759 1503 aa0.36□□□□□ -2.35
GPBP1-202ENST00000309096 DNAH9Q9NYC9 4486 aa0.35□□□□□ -2.35
GPBP1-202ENST00000309096 DNAH3Q8TD57 4116 aa0.35□□□□□ -2.35
GPBP1-202ENST00000309096 HSPG2P98160 4391 aa0.35□□□□□ -2.35
GPBP1-202ENST00000309096 M0QY20 66 aa0.34□□□□□ -2.35
GPBP1-202ENST00000309096 TFF3Q07654 80 aa0.34□□□□□ -2.35
GPBP1-202ENST00000309096 ACACAQ13085 2346 aa0.34□□□□□ -2.35
GPBP1-202ENST00000309096 STAB2Q8WWQ8 2551 aa0.34□□□□□ -2.36
GPBP1-202ENST00000309096 COL7A1Q02388 2944 aa0.34□□□□□ -2.36
GPBP1-202ENST00000309096 A0A0C4DFX4 3053 aa0.34□□□□□ -2.36
GPBP1-202ENST00000309096 TENM2Q9NT68 2774 aa0.34□□□□□ -2.36
GPBP1-202ENST00000309096 PKHD1P08F94 4074 aa0.34□□□□□ -2.36
GPBP1-202ENST00000309096 MMP24-AS1A0A0U1RRL7 71 aa0.33□□□□□ -2.36
GPBP1-202ENST00000309096 COL6A3P12111 3177 aa0.33□□□□□ -2.36
GPBP1-202ENST00000309096 AKAP9Q99996 3911 aa0.33□□□□□ -2.36
GPBP1-202ENST00000309096 FLGP20930 4061 aaPredicted RBP0.33□□□□□ -2.36
GPBP1-202ENST00000309096 SACSQ9NZJ4 4579 aa0.33□□□□□ -2.36
GPBP1-202ENST00000309096 RIF1Q5UIP0 2472 aaKnown RBP0.32□□□□□ -2.36
GPBP1-202ENST00000309096 A8MTW9 85 aa0.32□□□□□ -2.36
GPBP1-202ENST00000309096 NDUFA1O15239 70 aa0.32□□□□□ -2.36
GPBP1-202ENST00000309096 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
GPBP1-202ENST00000309096 LRP1BQ9NZR2 4599 aa0.32□□□□□ -2.36
GPBP1-202ENST00000309096 NBEAL1Q6ZS30 2694 aa0.32□□□□□ -2.36
GPBP1-202ENST00000309096 ANKHD1Q8IWZ3 2542 aaKnown RBP0.31□□□□□ -2.36
GPBP1-202ENST00000309096 CLTCL1P53675 1640 aa0.31□□□□□ -2.36
GPBP1-202ENST00000309096 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 NBEAQ8NFP9 2946 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 HTTP42858 3142 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 ATP7AQ04656 1500 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 ZANQ9Y493 2812 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 TNP1P09430 55 aa0.3□□□□□ -2.36
GPBP1-202ENST00000309096 NFAT5O94916 1531 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 TGP01266 2768 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 PDZD2O15018 2839 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 HIVEP1P15822 2718 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 M0QZ58 72 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 SPRR2AP35326 72 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 TACC2O95359 2948 aa0.29□□□□□ -2.36
GPBP1-202ENST00000309096 FASNP49327 2511 aaKnown RBP0.29□□□□□ -2.36
GPBP1-202ENST00000309096 FAT3Q8TDW7 4589 aa0.28□□□□□ -2.36
GPBP1-202ENST00000309096 LRP2P98164 4655 aa0.28□□□□□ -2.36
GPBP1-202ENST00000309096 HMCN2Q8NDA2 5059 aa0.28□□□□□ -2.36
GPBP1-202ENST00000309096 DEFB110Q30KQ9 67 aa0.28□□□□□ -2.36
GPBP1-202ENST00000309096 SONP18583 2426 aaKnown RBP0.28□□□□□ -2.36
GPBP1-202ENST00000309096 SAMD9LQ8IVG5 1584 aa0.28□□□□□ -2.36
GPBP1-202ENST00000309096 TEP1Q99973 2627 aaKnown RBP0.27□□□□□ -2.37
GPBP1-202ENST00000309096 ANK3Q12955 4377 aaKnown RBP0.27□□□□□ -2.37
GPBP1-202ENST00000309096 CUBNO60494 3623 aa0.27□□□□□ -2.37
GPBP1-202ENST00000309096 DNAH11Q96DT5 4516 aa0.27□□□□□ -2.37
GPBP1-202ENST00000309096 KALRNO60229 2985 aa0.27□□□□□ -2.37
GPBP1-202ENST00000309096 DNAH2Q9P225 4427 aa0.26□□□□□ -2.37
GPBP1-202ENST00000309096 NBEAL2Q6ZNJ1 2754 aa0.26□□□□□ -2.37
GPBP1-202ENST00000309096 PKHD1L1Q86WI1 4243 aa0.25□□□□□ -2.37
GPBP1-202ENST00000309096 APOBP04114 4563 aaKnown RBP0.25□□□□□ -2.37
GPBP1-202ENST00000309096 STAB1Q9NY15 2570 aa0.25□□□□□ -2.37
GPBP1-202ENST00000309096 TOP2AP11388 1531 aaKnown RBP0.24□□□□□ -2.37
GPBP1-202ENST00000309096 NBPF19A0A087WUL8 3843 aa0.23□□□□□ -2.37
GPBP1-202ENST00000309096 DYNC2H1Q8NCM8 4307 aaKnown RBP0.23□□□□□ -2.37
GPBP1-202ENST00000309096 WDR87Q6ZQQ6 2873 aa0.23□□□□□ -2.37
GPBP1-202ENST00000309096 MYO18BQ8IUG5 2567 aa0.22□□□□□ -2.37
GPBP1-202ENST00000309096 MGAM2Q2M2H8 2515 aa0.22□□□□□ -2.37
GPBP1-202ENST00000309096 ACACBO00763 2458 aa0.22□□□□□ -2.37
GPBP1-202ENST00000309096 DNAH6Q9C0G6 4158 aa0.22□□□□□ -2.37
GPBP1-202ENST00000309096 MXRA5Q9NR99 2828 aa0.22□□□□□ -2.37
GPBP1-202ENST00000309096 VPS13DQ5THJ4 4388 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms