RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
PTPN7-201ENST00000309017 KRTAP13-1Q8IUC0 172 aa6.69□□□□□ -1.34
PTPN7-201ENST00000309017 RETNLBQ9BQ08 111 aa6.69□□□□□ -1.34
PTPN7-201ENST00000309017 HUWE1Q7Z6Z7 4374 aaKnown RBP6.68□□□□□ -1.34
PTPN7-201ENST00000309017 PSORS1C2Q9UIG4 136 aa6.68□□□□□ -1.34
PTPN7-201ENST00000309017 A6NN06 94 aa6.67□□□□□ -1.34
PTPN7-201ENST00000309017 C7orf65Q6ZTY9 151 aa6.67□□□□□ -1.34
PTPN7-201ENST00000309017 WWC2-AS2Q96NR7 200 aa6.67□□□□□ -1.34
PTPN7-201ENST00000309017 LY6G6CO95867 125 aa6.66□□□□□ -1.34
PTPN7-201ENST00000309017 SPACA4Q8TDM5 124 aa6.66□□□□□ -1.34
PTPN7-201ENST00000309017 ASB16-AS1Q495Z4 193 aa6.66□□□□□ -1.34
PTPN7-201ENST00000309017 ACYP2P14621 99 aa6.65□□□□□ -1.34
PTPN7-201ENST00000309017 Q5W150 140 aa6.63□□□□□ -1.35
PTPN7-201ENST00000309017 ZNF861PO60384 105 aa6.63□□□□□ -1.35
PTPN7-201ENST00000309017 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
PTPN7-201ENST00000309017 RTL8CO15255 209 aa6.62□□□□□ -1.35
PTPN7-201ENST00000309017 IGLV5-52A0A0A0MRZ9 124 aa6.62□□□□□ -1.35
PTPN7-201ENST00000309017 PLAC8Q9NZF1 115 aa6.6□□□□□ -1.35
PTPN7-201ENST00000309017 A0A087WTM6 91 aa6.6□□□□□ -1.35
PTPN7-201ENST00000309017 A0A1B0GU69 56 aa6.6□□□□□ -1.35
PTPN7-201ENST00000309017 NUPR2A6NF83 97 aa6.59□□□□□ -1.35
PTPN7-201ENST00000309017 Q6ZRN7 208 aaPredicted RBP6.58□□□□□ -1.36
PTPN7-201ENST00000309017 PLECQ15149 4684 aaKnown RBP6.58□□□□□ -1.36
PTPN7-201ENST00000309017 DNHD1Q96M86 4753 aa6.57□□□□□ -1.36
PTPN7-201ENST00000309017 HECTD4Q9Y4D8 3996 aa6.57□□□□□ -1.36
PTPN7-201ENST00000309017 LINC00313P59037 77 aa6.56□□□□□ -1.36
PTPN7-201ENST00000309017 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
PTPN7-201ENST00000309017 KMT2AQ03164 3969 aa6.54□□□□□ -1.36
PTPN7-201ENST00000309017 C8orf87E5RJ46 101 aa6.54□□□□□ -1.36
PTPN7-201ENST00000309017 IGKV2D-30A0A075B6S6 120 aa6.53□□□□□ -1.36
PTPN7-201ENST00000309017 FAM229AH3BQW9 127 aa6.53□□□□□ -1.36
PTPN7-201ENST00000309017 IGKV2-30P06310 120 aa6.53□□□□□ -1.36
PTPN7-201ENST00000309017 IGLV7-43P04211 117 aa6.52□□□□□ -1.37
PTPN7-201ENST00000309017 FLG2Q5D862 2391 aaPredicted RBP6.51□□□□□ -1.37
PTPN7-201ENST00000309017 FBN3Q75N90 2809 aa6.51□□□□□ -1.37
PTPN7-201ENST00000309017 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
PTPN7-201ENST00000309017 DMAC1Q96GE9 116 aa6.5□□□□□ -1.37
PTPN7-201ENST00000309017 DNAH8Q96JB1 4490 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 MIR22HGQ0VDD5 57 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 SSBP3-AS1Q7Z2R9 100 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 STARD9Q9P2P6 4700 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 SPINK1P00995 79 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 ADM2Q7Z4H4 148 aa6.48□□□□□ -1.37
PTPN7-201ENST00000309017 UQCR11O14957 56 aa6.47□□□□□ -1.37
PTPN7-201ENST00000309017 DYNC2H1Q8NCM8 4307 aaKnown RBP6.47□□□□□ -1.37
PTPN7-201ENST00000309017 KRTAP13-3Q3SY46 172 aa6.47□□□□□ -1.37
PTPN7-201ENST00000309017 DNAH17Q9UFH2 4485 aa6.47□□□□□ -1.37
PTPN7-201ENST00000309017 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.37
PTPN7-201ENST00000309017 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
PTPN7-201ENST00000309017 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
PTPN7-201ENST00000309017 MEGF8Q7Z7M0 2845 aa6.42□□□□□ -1.38
PTPN7-201ENST00000309017 PRKDCP78527 4128 aaKnown RBP6.42□□□□□ -1.38
PTPN7-201ENST00000309017 C4orf48Q5BLP8 95 aa6.41□□□□□ -1.38
PTPN7-201ENST00000309017 ALMS1Q8TCU4 4167 aa6.41□□□□□ -1.38
PTPN7-201ENST00000309017 SPATA8Q6RVD6 105 aa6.4□□□□□ -1.38
PTPN7-201ENST00000309017 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
PTPN7-201ENST00000309017 LINC01554Q52M75 96 aa6.37□□□□□ -1.39
PTPN7-201ENST00000309017 Q8N1X5 172 aa6.36□□□□□ -1.39
PTPN7-201ENST00000309017 FAT2Q9NYQ8 4349 aa6.35□□□□□ -1.39
PTPN7-201ENST00000309017 KRTAP13-2Q52LG2 175 aa6.34□□□□□ -1.39
PTPN7-201ENST00000309017 CSAG1Q6PB30 78 aa6.32□□□□□ -1.4
PTPN7-201ENST00000309017 KRTAP10-2P60368 255 aa6.31□□□□□ -1.4
PTPN7-201ENST00000309017 TYMSOSQ8TAI1 123 aa6.29□□□□□ -1.4
PTPN7-201ENST00000309017 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
PTPN7-201ENST00000309017 DNAH11Q96DT5 4516 aa6.27□□□□□ -1.41
PTPN7-201ENST00000309017 DNAH5Q8TE73 4624 aa6.24□□□□□ -1.41
PTPN7-201ENST00000309017 HYDINQ4G0P3 5121 aa6.24□□□□□ -1.41
PTPN7-201ENST00000309017 KRTAP10-1P60331 282 aa6.22□□□□□ -1.41
PTPN7-201ENST00000309017 C9orf92A6NGG3 77 aa6.19□□□□□ -1.42
PTPN7-201ENST00000309017 SMR3BP02814 79 aaPredicted RBP6.18□□□□□ -1.42
PTPN7-201ENST00000309017 PKD1P98161 4303 aa6.18□□□□□ -1.42
PTPN7-201ENST00000309017 KRTAP1-4P0C5Y4 121 aa6.18□□□□□ -1.42
PTPN7-201ENST00000309017 KRTAP21-3Q3LHN1 58 aa6.17□□□□□ -1.42
PTPN7-201ENST00000309017 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
PTPN7-201ENST00000309017 A0A1B0GU33 70 aa6.15□□□□□ -1.42
PTPN7-201ENST00000309017 LRP1BQ9NZR2 4599 aa6.15□□□□□ -1.43
PTPN7-201ENST00000309017 Q6ZSA8 131 aa6.14□□□□□ -1.43
PTPN7-201ENST00000309017 H3BS24 57 aa6.14□□□□□ -1.43
PTPN7-201ENST00000309017 K7ERS5 55 aa6.13□□□□□ -1.43
PTPN7-201ENST00000309017 H0YAA0 97 aa6.12□□□□□ -1.43
PTPN7-201ENST00000309017 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
PTPN7-201ENST00000309017 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
PTPN7-201ENST00000309017 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
PTPN7-201ENST00000309017 A8MUU9 505 aa6.07□□□□□ -1.44
PTPN7-201ENST00000309017 H1FX-AS1Q4G0G2 97 aa6.07□□□□□ -1.44
PTPN7-201ENST00000309017 KRTAP25-1Q3LHN0 102 aa6.05□□□□□ -1.44
PTPN7-201ENST00000309017 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
PTPN7-201ENST00000309017 C20orf166-AS1Q96NR2 134 aa5.97□□□□□ -1.45
PTPN7-201ENST00000309017 A0A0D9SG42 100 aa5.96□□□□□ -1.45
PTPN7-201ENST00000309017 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.45
PTPN7-201ENST00000309017 COX6B2Q6YFQ2 88 aa5.96□□□□□ -1.46
PTPN7-201ENST00000309017 ROMO1P60602 79 aa5.95□□□□□ -1.46
PTPN7-201ENST00000309017 SACSQ9NZJ4 4579 aa5.9□□□□□ -1.46
PTPN7-201ENST00000309017 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
PTPN7-201ENST00000309017 SPINT4Q6UDR6 99 aa5.88□□□□□ -1.47
PTPN7-201ENST00000309017 KMT2CQ8NEZ4 4911 aaKnown RBP5.84□□□□□ -1.47
PTPN7-201ENST00000309017 J3QL48 77 aa5.82□□□□□ -1.48
PTPN7-201ENST00000309017 FAT1Q14517 4588 aa5.8□□□□□ -1.48
PTPN7-201ENST00000309017 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
PTPN7-201ENST00000309017 S4R3F8 94 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms