RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 A0A087X002 238 aa9.84□□□□□ -0.83
CCDC8-201ENST00000307522 NOTCH2NLQ7Z3S9 236 aa9.84□□□□□ -0.83
CCDC8-201ENST00000307522 DNAH2Q9P225 4427 aa9.84□□□□□ -0.83
CCDC8-201ENST00000307522 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
CCDC8-201ENST00000307522 NUPR2A6NF83 97 aa9.81□□□□□ -0.84
CCDC8-201ENST00000307522 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
CCDC8-201ENST00000307522 FRAS1Q86XX4 4008 aa9.8□□□□□ -0.84
CCDC8-201ENST00000307522 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.79□□□□□ -0.84
CCDC8-201ENST00000307522 IGLV8-61A0A075B6I0 122 aa9.77□□□□□ -0.85
CCDC8-201ENST00000307522 ANAPC11Q9NYG5 84 aa9.77□□□□□ -0.85
CCDC8-201ENST00000307522 LINC01554Q52M75 96 aa9.77□□□□□ -0.85
CCDC8-201ENST00000307522 SPINK6Q6UWN8 80 aa9.76□□□□□ -0.85
CCDC8-201ENST00000307522 C8orf17Q9NRJ1 99 aa9.75□□□□□ -0.85
CCDC8-201ENST00000307522 DNAH6Q9C0G6 4158 aa9.75□□□□□ -0.85
CCDC8-201ENST00000307522 HYDINQ4G0P3 5121 aa9.74□□□□□ -0.85
CCDC8-201ENST00000307522 Q6ZRN7 208 aaPredicted RBP9.72□□□□□ -0.85
CCDC8-201ENST00000307522 Q5W150 140 aa9.71□□□□□ -0.86
CCDC8-201ENST00000307522 Q96NJ1 140 aa9.7□□□□□ -0.86
CCDC8-201ENST00000307522 FLG2Q5D862 2391 aaPredicted RBP9.7□□□□□ -0.86
CCDC8-201ENST00000307522 A0A087WTM6 91 aa9.69□□□□□ -0.86
CCDC8-201ENST00000307522 DYNC2H1Q8NCM8 4307 aaKnown RBP9.69□□□□□ -0.86
CCDC8-201ENST00000307522 DNAH11Q96DT5 4516 aa9.68□□□□□ -0.86
CCDC8-201ENST00000307522 CSAG1Q6PB30 78 aa9.68□□□□□ -0.86
CCDC8-201ENST00000307522 RTL8CO15255 209 aa9.66□□□□□ -0.86
CCDC8-201ENST00000307522 CDK2AP2O75956 126 aa9.66□□□□□ -0.86
CCDC8-201ENST00000307522 HECTD4Q9Y4D8 3996 aa9.66□□□□□ -0.86
CCDC8-201ENST00000307522 Q6ZR54 194 aa9.66□□□□□ -0.86
CCDC8-201ENST00000307522 TP53AIP1Q9HCN2 124 aa9.65□□□□□ -0.86
CCDC8-201ENST00000307522 A0A1B0GU69 56 aa9.63□□□□□ -0.87
CCDC8-201ENST00000307522 MRPL34Q9BQ48 92 aaKnown RBP9.63□□□□□ -0.87
CCDC8-201ENST00000307522 C14orf177Q52M58 125 aa9.63□□□□□ -0.87
CCDC8-201ENST00000307522 C1orf134Q5TEV5 83 aa9.62□□□□□ -0.87
CCDC8-201ENST00000307522 A0A1B0GVX0 72 aa9.62□□□□□ -0.87
CCDC8-201ENST00000307522 DNAH17Q9UFH2 4485 aa9.62□□□□□ -0.87
CCDC8-201ENST00000307522 IGLV5-52A0A0A0MRZ9 124 aa9.61□□□□□ -0.87
CCDC8-201ENST00000307522 KRTAP10-2P60368 255 aa9.61□□□□□ -0.87
CCDC8-201ENST00000307522 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
CCDC8-201ENST00000307522 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
CCDC8-201ENST00000307522 DNAH8Q96JB1 4490 aa9.56□□□□□ -0.88
CCDC8-201ENST00000307522 MIR22HGQ0VDD5 57 aa9.55□□□□□ -0.88
CCDC8-201ENST00000307522 SPRR1BP22528 89 aa9.55□□□□□ -0.88
CCDC8-201ENST00000307522 ACYP2P14621 99 aa9.54□□□□□ -0.88
CCDC8-201ENST00000307522 PSORS1C2Q9UIG4 136 aa9.54□□□□□ -0.88
CCDC8-201ENST00000307522 SPACA4Q8TDM5 124 aa9.53□□□□□ -0.88
CCDC8-201ENST00000307522 PKHD1P08F94 4074 aa9.51□□□□□ -0.89
CCDC8-201ENST00000307522 SPINK1P00995 79 aa9.5□□□□□ -0.89
CCDC8-201ENST00000307522 LRP1BQ9NZR2 4599 aa9.49□□□□□ -0.89
CCDC8-201ENST00000307522 ALMS1Q8TCU4 4167 aa9.49□□□□□ -0.89
CCDC8-201ENST00000307522 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
CCDC8-201ENST00000307522 WWC2-AS2Q96NR7 200 aa9.46□□□□□ -0.89
CCDC8-201ENST00000307522 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CCDC8-201ENST00000307522 UQCR11O14957 56 aa9.44□□□□□ -0.9
CCDC8-201ENST00000307522 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
CCDC8-201ENST00000307522 CRIPTQ9P021 101 aa9.44□□□□□ -0.9
CCDC8-201ENST00000307522 KRTAP10-1P60331 282 aa9.41□□□□□ -0.9
CCDC8-201ENST00000307522 FAT2Q9NYQ8 4349 aa9.4□□□□□ -0.9
CCDC8-201ENST00000307522 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
CCDC8-201ENST00000307522 IGKV2-30P06310 120 aa9.39□□□□□ -0.91
CCDC8-201ENST00000307522 KMT2CQ8NEZ4 4911 aaKnown RBP9.39□□□□□ -0.91
CCDC8-201ENST00000307522 KRTAP13-1Q8IUC0 172 aa9.39□□□□□ -0.91
CCDC8-201ENST00000307522 SMR3BP02814 79 aaPredicted RBP9.38□□□□□ -0.91
CCDC8-201ENST00000307522 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
CCDC8-201ENST00000307522 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
CCDC8-201ENST00000307522 ZNF706Q9Y5V0 76 aaPredicted RBP9.37□□□□□ -0.91
CCDC8-201ENST00000307522 SACSQ9NZJ4 4579 aa9.35□□□□□ -0.91
CCDC8-201ENST00000307522 DMBT1Q9UGM3 2413 aaPredicted RBP9.34□□□□□ -0.91
CCDC8-201ENST00000307522 FAT1Q14517 4588 aa9.34□□□□□ -0.91
CCDC8-201ENST00000307522 ZNF861PO60384 105 aa9.32□□□□□ -0.92
CCDC8-201ENST00000307522 VPS13BQ7Z7G8 4022 aa9.3□□□□□ -0.92
CCDC8-201ENST00000307522 PKD1P98161 4303 aa9.29□□□□□ -0.92
CCDC8-201ENST00000307522 IGLV7-43P04211 117 aa9.27□□□□□ -0.93
CCDC8-201ENST00000307522 Q8N1X5 172 aa9.27□□□□□ -0.93
CCDC8-201ENST00000307522 LINC00483Q53H64 154 aa9.22□□□□□ -0.93
CCDC8-201ENST00000307522 DYNC1H1Q14204 4646 aaKnown RBP9.18□□□□□ -0.94
CCDC8-201ENST00000307522 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
CCDC8-201ENST00000307522 ROMO1P60602 79 aa9.16□□□□□ -0.94
CCDC8-201ENST00000307522 KRTAP21-3Q3LHN1 58 aa9.16□□□□□ -0.94
CCDC8-201ENST00000307522 H0YAA0 97 aa9.12□□□□□ -0.95
CCDC8-201ENST00000307522 KRTAP25-1Q3LHN0 102 aa9.12□□□□□ -0.95
CCDC8-201ENST00000307522 LINC00304Q8N9R0 145 aa9.12□□□□□ -0.95
CCDC8-201ENST00000307522 TYMSOSQ8TAI1 123 aa9.1□□□□□ -0.95
CCDC8-201ENST00000307522 KRTAP13-2Q52LG2 175 aa9.1□□□□□ -0.95
CCDC8-201ENST00000307522 Q6ZSA8 131 aa9.09□□□□□ -0.95
CCDC8-201ENST00000307522 A8MUU9 505 aa9.07□□□□□ -0.96
CCDC8-201ENST00000307522 SSBP3-AS1Q7Z2R9 100 aa9.05□□□□□ -0.96
CCDC8-201ENST00000307522 RYR3Q15413 4870 aa9.04□□□□□ -0.96
CCDC8-201ENST00000307522 RYR2Q92736 4967 aa9.03□□□□□ -0.96
CCDC8-201ENST00000307522 P0C880 135 aa9.03□□□□□ -0.96
CCDC8-201ENST00000307522 APOBP04114 4563 aaKnown RBP9.01□□□□□ -0.97
CCDC8-201ENST00000307522 LRP1Q07954 4544 aaKnown RBP9□□□□□ -0.97
CCDC8-201ENST00000307522 KRTAP16-1A8MUX0 517 aa8.97□□□□□ -0.97
CCDC8-201ENST00000307522 KRTAP1-4P0C5Y4 121 aa8.97□□□□□ -0.97
CCDC8-201ENST00000307522 A0A1B0GU33 70 aa8.93□□□□□ -0.98
CCDC8-201ENST00000307522 KIAA1109Q2LD37 5005 aa8.91□□□□□ -0.98
CCDC8-201ENST00000307522 MYCBP2O75592 4640 aa8.91□□□□□ -0.98
CCDC8-201ENST00000307522 C9orf92A6NGG3 77 aa8.86□□□□□ -0.99
CCDC8-201ENST00000307522 SPINT4Q6UDR6 99 aa8.86□□□□□ -0.99
CCDC8-201ENST00000307522 A0A1B0GVY2 172 aa8.83□□□□□ -1
CCDC8-201ENST00000307522 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
CCDC8-201ENST00000307522 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms