RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 LCA10Q71F78 164 aa7.46□□□□□ -1.21
PDGFD-201ENST00000302251 KRTAP1-5Q9BYS1 174 aa7.46□□□□□ -1.21
PDGFD-201ENST00000302251 HRES1P13985 223 aa7.46□□□□□ -1.22
PDGFD-201ENST00000302251 ZNF861PO60384 105 aa7.45□□□□□ -1.22
PDGFD-201ENST00000302251 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.45□□□□□ -1.22
PDGFD-201ENST00000302251 FAM229AH3BQW9 127 aa7.44□□□□□ -1.22
PDGFD-201ENST00000302251 KRTAP7-1Q8IUC3 87 aa7.44□□□□□ -1.22
PDGFD-201ENST00000302251 DNAH10Q8IVF4 4471 aa7.44□□□□□ -1.22
PDGFD-201ENST00000302251 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
PDGFD-201ENST00000302251 KRTAP29-1A8MX34 341 aaPredicted RBP7.42□□□□□ -1.22
PDGFD-201ENST00000302251 Q96NJ1 140 aa7.42□□□□□ -1.22
PDGFD-201ENST00000302251 FLG2Q5D862 2391 aaPredicted RBP7.42□□□□□ -1.22
PDGFD-201ENST00000302251 LINC01558Q9Y6Z2 57 aa7.42□□□□□ -1.22
PDGFD-201ENST00000302251 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
PDGFD-201ENST00000302251 A0A087WTM6 91 aa7.39□□□□□ -1.23
PDGFD-201ENST00000302251 Q8N1X5 172 aa7.38□□□□□ -1.23
PDGFD-201ENST00000302251 HUWE1Q7Z6Z7 4374 aaKnown RBP7.37□□□□□ -1.23
PDGFD-201ENST00000302251 PANO1I0J062 215 aa7.37□□□□□ -1.23
PDGFD-201ENST00000302251 APLNQ9ULZ1 77 aa7.37□□□□□ -1.23
PDGFD-201ENST00000302251 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
PDGFD-201ENST00000302251 LCE6AA0A183 80 aa7.36□□□□□ -1.23
PDGFD-201ENST00000302251 A0A087X002 238 aa7.35□□□□□ -1.23
PDGFD-201ENST00000302251 NOTCH2NLQ7Z3S9 236 aa7.35□□□□□ -1.23
PDGFD-201ENST00000302251 DYNC2H1Q8NCM8 4307 aaKnown RBP7.34□□□□□ -1.23
PDGFD-201ENST00000302251 TYMSOSQ8TAI1 123 aa7.33□□□□□ -1.24
PDGFD-201ENST00000302251 SPRR1BP22528 89 aa7.32□□□□□ -1.24
PDGFD-201ENST00000302251 PLA2G1BP04054 148 aaKnown RBP7.32□□□□□ -1.24
PDGFD-201ENST00000302251 IGLV7-43P04211 117 aa7.32□□□□□ -1.24
PDGFD-201ENST00000302251 SSBP3-AS1Q7Z2R9 100 aa7.31□□□□□ -1.24
PDGFD-201ENST00000302251 COL7A1Q02388 2944 aa7.29□□□□□ -1.24
PDGFD-201ENST00000302251 C9orf92A6NGG3 77 aa7.27□□□□□ -1.25
PDGFD-201ENST00000302251 Q5W150 140 aa7.27□□□□□ -1.25
PDGFD-201ENST00000302251 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
PDGFD-201ENST00000302251 WWC2-AS2Q96NR7 200 aa7.26□□□□□ -1.25
PDGFD-201ENST00000302251 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
PDGFD-201ENST00000302251 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
PDGFD-201ENST00000302251 TGP01266 2768 aa7.22□□□□□ -1.25
PDGFD-201ENST00000302251 A6NN06 94 aa7.22□□□□□ -1.25
PDGFD-201ENST00000302251 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
PDGFD-201ENST00000302251 Q6ZR54 194 aa7.21□□□□□ -1.25
PDGFD-201ENST00000302251 PRKDCP78527 4128 aaKnown RBP7.21□□□□□ -1.26
PDGFD-201ENST00000302251 H3BS24 57 aa7.18□□□□□ -1.26
PDGFD-201ENST00000302251 SMR3BP02814 79 aaPredicted RBP7.18□□□□□ -1.26
PDGFD-201ENST00000302251 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
PDGFD-201ENST00000302251 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
PDGFD-201ENST00000302251 A0A0D9SG42 100 aa7.15□□□□□ -1.26
PDGFD-201ENST00000302251 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
PDGFD-201ENST00000302251 PLECQ15149 4684 aaKnown RBP7.13□□□□□ -1.27
PDGFD-201ENST00000302251 LINC00304Q8N9R0 145 aa7.11□□□□□ -1.27
PDGFD-201ENST00000302251 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
PDGFD-201ENST00000302251 PLAC8Q9NZF1 115 aa7.11□□□□□ -1.27
PDGFD-201ENST00000302251 A0A1B0GU33 70 aa7.09□□□□□ -1.27
PDGFD-201ENST00000302251 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.28
PDGFD-201ENST00000302251 DNAH2Q9P225 4427 aa7.09□□□□□ -1.28
PDGFD-201ENST00000302251 LINC00483Q53H64 154 aa7.07□□□□□ -1.28
PDGFD-201ENST00000302251 KMT2AQ03164 3969 aa7.06□□□□□ -1.28
PDGFD-201ENST00000302251 FBN3Q75N90 2809 aa7.06□□□□□ -1.28
PDGFD-201ENST00000302251 DNAH8Q96JB1 4490 aa7.03□□□□□ -1.28
PDGFD-201ENST00000302251 VPS13DQ5THJ4 4388 aa7.03□□□□□ -1.28
PDGFD-201ENST00000302251 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
PDGFD-201ENST00000302251 SPATA8Q6RVD6 105 aa7.01□□□□□ -1.29
PDGFD-201ENST00000302251 KRTAP10-2P60368 255 aa6.99□□□□□ -1.29
PDGFD-201ENST00000302251 ALMS1Q8TCU4 4167 aa6.99□□□□□ -1.29
PDGFD-201ENST00000302251 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
PDGFD-201ENST00000302251 DNAH17Q9UFH2 4485 aa6.97□□□□□ -1.29
PDGFD-201ENST00000302251 DNAH6Q9C0G6 4158 aa6.93□□□□□ -1.3
PDGFD-201ENST00000302251 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
PDGFD-201ENST00000302251 KRTAP13-2Q52LG2 175 aa6.87□□□□□ -1.31
PDGFD-201ENST00000302251 ASB16-AS1Q495Z4 193 aa6.86□□□□□ -1.31
PDGFD-201ENST00000302251 PKD1P98161 4303 aa6.86□□□□□ -1.31
PDGFD-201ENST00000302251 DNAH11Q96DT5 4516 aa6.83□□□□□ -1.32
PDGFD-201ENST00000302251 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
PDGFD-201ENST00000302251 H1FX-AS1Q4G0G2 97 aa6.83□□□□□ -1.32
PDGFD-201ENST00000302251 DNHD1Q96M86 4753 aa6.81□□□□□ -1.32
PDGFD-201ENST00000302251 MEGF8Q7Z7M0 2845 aa6.81□□□□□ -1.32
PDGFD-201ENST00000302251 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
PDGFD-201ENST00000302251 FAT2Q9NYQ8 4349 aa6.79□□□□□ -1.32
PDGFD-201ENST00000302251 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
PDGFD-201ENST00000302251 RPL37P61927 97 aaKnown RBP6.75□□□□□ -1.33
PDGFD-201ENST00000302251 ROMO1P60602 79 aa6.73□□□□□ -1.33
PDGFD-201ENST00000302251 Q6ZSA8 131 aa6.73□□□□□ -1.33
PDGFD-201ENST00000302251 COX6B2Q6YFQ2 88 aa6.67□□□□□ -1.34
PDGFD-201ENST00000302251 KRTAP13-3Q3SY46 172 aa6.66□□□□□ -1.34
PDGFD-201ENST00000302251 H0YAA0 97 aa6.66□□□□□ -1.34
PDGFD-201ENST00000302251 A8MUU9 505 aa6.66□□□□□ -1.34
PDGFD-201ENST00000302251 S4R3F8 94 aa6.65□□□□□ -1.35
PDGFD-201ENST00000302251 LRP1BQ9NZR2 4599 aa6.61□□□□□ -1.35
PDGFD-201ENST00000302251 VPS13BQ7Z7G8 4022 aa6.61□□□□□ -1.35
PDGFD-201ENST00000302251 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
PDGFD-201ENST00000302251 PKHD1P08F94 4074 aa6.59□□□□□ -1.36
PDGFD-201ENST00000302251 NDUFAF8A1L188 74 aa6.59□□□□□ -1.36
PDGFD-201ENST00000302251 KRTAP1-4P0C5Y4 121 aa6.58□□□□□ -1.36
PDGFD-201ENST00000302251 C10orf95Q9H7T3 257 aa6.57□□□□□ -1.36
PDGFD-201ENST00000302251 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
PDGFD-201ENST00000302251 R4GN34 69 aa6.5□□□□□ -1.37
PDGFD-201ENST00000302251 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
PDGFD-201ENST00000302251 CAMK2N1Q7Z7J9 78 aa6.47□□□□□ -1.37
PDGFD-201ENST00000302251 M0QZ58 72 aa6.46□□□□□ -1.38
PDGFD-201ENST00000302251 C20orf166-AS1Q96NR2 134 aa6.45□□□□□ -1.38
PDGFD-201ENST00000302251 PKHD1L1Q86WI1 4243 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms