RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 NOTCH2NLQ7Z3S9 236 aa7.15□□□□□ -1.27
ERCC1-202ENST00000300853 STAB2Q8WWQ8 2551 aa7.14□□□□□ -1.27
ERCC1-202ENST00000300853 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
ERCC1-202ENST00000300853 KRTAP24-1Q3LI83 254 aa7.13□□□□□ -1.27
ERCC1-202ENST00000300853 PLA2G1BP04054 148 aaKnown RBP7.12□□□□□ -1.27
ERCC1-202ENST00000300853 TENM3Q9P273 2699 aa7.12□□□□□ -1.27
ERCC1-202ENST00000300853 Q5W150 140 aa7.12□□□□□ -1.27
ERCC1-202ENST00000300853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
ERCC1-202ENST00000300853 TENM2Q9NT68 2774 aa7.1□□□□□ -1.27
ERCC1-202ENST00000300853 C1orf134Q5TEV5 83 aa7.1□□□□□ -1.27
ERCC1-202ENST00000300853 SSBP3-AS1Q7Z2R9 100 aa7.09□□□□□ -1.27
ERCC1-202ENST00000300853 DMAC1Q96GE9 116 aa7.09□□□□□ -1.27
ERCC1-202ENST00000300853 NUPR2A6NF83 97 aa7.08□□□□□ -1.28
ERCC1-202ENST00000300853 Q8N1X5 172 aa7.08□□□□□ -1.28
ERCC1-202ENST00000300853 FLG2Q5D862 2391 aaPredicted RBP7.07□□□□□ -1.28
ERCC1-202ENST00000300853 SPATA8Q6RVD6 105 aa7.07□□□□□ -1.28
ERCC1-202ENST00000300853 Q96NJ1 140 aa7.07□□□□□ -1.28
ERCC1-202ENST00000300853 WWC2-AS2Q96NR7 200 aa7.07□□□□□ -1.28
ERCC1-202ENST00000300853 PANO1I0J062 215 aa7.05□□□□□ -1.28
ERCC1-202ENST00000300853 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
ERCC1-202ENST00000300853 DMBT1Q9UGM3 2413 aaPredicted RBP7.04□□□□□ -1.28
ERCC1-202ENST00000300853 ASB16-AS1Q495Z4 193 aa7.04□□□□□ -1.28
ERCC1-202ENST00000300853 PLAC8Q9NZF1 115 aa7.03□□□□□ -1.28
ERCC1-202ENST00000300853 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
ERCC1-202ENST00000300853 A0A087WTM6 91 aa7.01□□□□□ -1.29
ERCC1-202ENST00000300853 IGLV7-43P04211 117 aa7.01□□□□□ -1.29
ERCC1-202ENST00000300853 APLNQ9ULZ1 77 aa7.01□□□□□ -1.29
ERCC1-202ENST00000300853 LY6G6CO95867 125 aa7□□□□□ -1.29
ERCC1-202ENST00000300853 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
ERCC1-202ENST00000300853 CSMD3Q7Z407 3707 aa6.97□□□□□ -1.29
ERCC1-202ENST00000300853 LINC00483Q53H64 154 aa6.97□□□□□ -1.29
ERCC1-202ENST00000300853 SRRM2Q9UQ35 2752 aaKnown RBP6.95□□□□□ -1.3
ERCC1-202ENST00000300853 A0A1B0GU33 70 aa6.94□□□□□ -1.3
ERCC1-202ENST00000300853 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
ERCC1-202ENST00000300853 TYMSOSQ8TAI1 123 aa6.92□□□□□ -1.3
ERCC1-202ENST00000300853 TGP01266 2768 aa6.87□□□□□ -1.31
ERCC1-202ENST00000300853 C9orf92A6NGG3 77 aa6.83□□□□□ -1.32
ERCC1-202ENST00000300853 A0A0D9SG42 100 aa6.83□□□□□ -1.32
ERCC1-202ENST00000300853 KRTAP25-1Q3LHN0 102 aa6.83□□□□□ -1.32
ERCC1-202ENST00000300853 ROMO1P60602 79 aa6.78□□□□□ -1.32
ERCC1-202ENST00000300853 COL7A1Q02388 2944 aa6.75□□□□□ -1.33
ERCC1-202ENST00000300853 LINC00304Q8N9R0 145 aa6.75□□□□□ -1.33
ERCC1-202ENST00000300853 H1FX-AS1Q4G0G2 97 aa6.74□□□□□ -1.33
ERCC1-202ENST00000300853 Q6ZRN7 208 aaPredicted RBP6.73□□□□□ -1.33
ERCC1-202ENST00000300853 KRTAP13-3Q3SY46 172 aa6.72□□□□□ -1.33
ERCC1-202ENST00000300853 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.33
ERCC1-202ENST00000300853 A8MUU9 505 aa6.68□□□□□ -1.34
ERCC1-202ENST00000300853 Q6ZSA8 131 aa6.68□□□□□ -1.34
ERCC1-202ENST00000300853 H0YAA0 97 aa6.64□□□□□ -1.35
ERCC1-202ENST00000300853 KRTAP13-2Q52LG2 175 aa6.64□□□□□ -1.35
ERCC1-202ENST00000300853 RPL37P61927 97 aaKnown RBP6.63□□□□□ -1.35
ERCC1-202ENST00000300853 SMR3BP02814 79 aaPredicted RBP6.58□□□□□ -1.36
ERCC1-202ENST00000300853 KRTAP10-2P60368 255 aa6.58□□□□□ -1.36
ERCC1-202ENST00000300853 NDUFAF8A1L188 74 aa6.57□□□□□ -1.36
ERCC1-202ENST00000300853 KRTAP16-1A8MUX0 517 aa6.54□□□□□ -1.36
ERCC1-202ENST00000300853 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
ERCC1-202ENST00000300853 KRTAP10-1P60331 282 aa6.52□□□□□ -1.37
ERCC1-202ENST00000300853 FBN3Q75N90 2809 aa6.5□□□□□ -1.37
ERCC1-202ENST00000300853 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
ERCC1-202ENST00000300853 S4R3F8 94 aa6.41□□□□□ -1.38
ERCC1-202ENST00000300853 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.39
ERCC1-202ENST00000300853 ANK2Q01484 3957 aa6.39□□□□□ -1.39
ERCC1-202ENST00000300853 KRTAP1-4P0C5Y4 121 aa6.38□□□□□ -1.39
ERCC1-202ENST00000300853 P0C880 135 aa6.34□□□□□ -1.4
ERCC1-202ENST00000300853 LUZP6Q538Z0 58 aa6.34□□□□□ -1.4
ERCC1-202ENST00000300853 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.4
ERCC1-202ENST00000300853 LYSTQ99698 3801 aa6.29□□□□□ -1.4
ERCC1-202ENST00000300853 RPS29P62273 56 aaKnown RBP6.29□□□□□ -1.4
ERCC1-202ENST00000300853 TPRXLQ17RH7 258 aa6.24□□□□□ -1.41
ERCC1-202ENST00000300853 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
ERCC1-202ENST00000300853 DNAH10Q8IVF4 4471 aa6.24□□□□□ -1.41
ERCC1-202ENST00000300853 A0A0A0MQY5 61 aa6.21□□□□□ -1.42
ERCC1-202ENST00000300853 R4GN34 69 aa6.18□□□□□ -1.42
ERCC1-202ENST00000300853 DNHD1Q96M86 4753 aa6.18□□□□□ -1.42
ERCC1-202ENST00000300853 M0QZ58 72 aa6.17□□□□□ -1.42
ERCC1-202ENST00000300853 CAMK2N1Q7Z7J9 78 aa6.12□□□□□ -1.43
ERCC1-202ENST00000300853 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
ERCC1-202ENST00000300853 HUWE1Q7Z6Z7 4374 aaKnown RBP6.1□□□□□ -1.43
ERCC1-202ENST00000300853 KRTAP12-2P59991 146 aa6.07□□□□□ -1.44
ERCC1-202ENST00000300853 KRTAP10-6P60371 365 aaPredicted RBP6.06□□□□□ -1.44
ERCC1-202ENST00000300853 PLAC4Q8WY50 150 aa6.04□□□□□ -1.44
ERCC1-202ENST00000300853 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
ERCC1-202ENST00000300853 KRTAP15-1Q3LI76 137 aa6.02□□□□□ -1.45
ERCC1-202ENST00000300853 PLECQ15149 4684 aaKnown RBP6.01□□□□□ -1.45
ERCC1-202ENST00000300853 PRKDCP78527 4128 aaKnown RBP6□□□□□ -1.45
ERCC1-202ENST00000300853 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
ERCC1-202ENST00000300853 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
ERCC1-202ENST00000300853 KMT2AQ03164 3969 aa5.96□□□□□ -1.46
ERCC1-202ENST00000300853 KRTAP21-3Q3LHN1 58 aa5.96□□□□□ -1.46
ERCC1-202ENST00000300853 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
ERCC1-202ENST00000300853 XP32Q5T750 250 aa5.94□□□□□ -1.46
ERCC1-202ENST00000300853 KRTAP10-8P60410 259 aa5.93□□□□□ -1.46
ERCC1-202ENST00000300853 STARD9Q9P2P6 4700 aa5.92□□□□□ -1.46
ERCC1-202ENST00000300853 Q5VSD8 79 aa5.92□□□□□ -1.46
ERCC1-202ENST00000300853 KRTAP3-2Q9BYR7 98 aa5.91□□□□□ -1.46
ERCC1-202ENST00000300853 DNAH8Q96JB1 4490 aa5.9□□□□□ -1.46
ERCC1-202ENST00000300853 KRTAP3-3Q9BYR6 98 aa5.89□□□□□ -1.47
ERCC1-202ENST00000300853 FRAS1Q86XX4 4008 aa5.86□□□□□ -1.47
ERCC1-202ENST00000300853 CMYA5Q8N3K9 4069 aa5.86□□□□□ -1.47
ERCC1-202ENST00000300853 DNAH11Q96DT5 4516 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms