RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 CDC42SE1Q9NRR8 79 aa4.13□□□□□ -1.75
TMC1-201ENST00000297784 A0A1W2PNN7 141 aa4.13□□□□□ -1.75
TMC1-201ENST00000297784 APOBP04114 4563 aaKnown RBP4.13□□□□□ -1.75
TMC1-201ENST00000297784 IGLV1-50A0A075B6I6 118 aa4.12□□□□□ -1.75
TMC1-201ENST00000297784 IGKV2-24A0A0C4DH68 120 aa4.12□□□□□ -1.75
TMC1-201ENST00000297784 H0Y9P7 68 aa4.12□□□□□ -1.75
TMC1-201ENST00000297784 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.12□□□□□ -1.75
TMC1-201ENST00000297784 LCE2CQ5TA81 110 aa4.11□□□□□ -1.75
TMC1-201ENST00000297784 IGLV8-61A0A075B6I0 122 aa4.11□□□□□ -1.75
TMC1-201ENST00000297784 PLAC8Q9NZF1 115 aa4.11□□□□□ -1.75
TMC1-201ENST00000297784 C7orf65Q6ZTY9 151 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 KRTAP11-1Q8IUC1 163 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 IGLV7-46A0A075B6I9 117 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 A6NED7 52 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 WFDC13Q8IUB5 93 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 SPTSSBQ8NFR3 76 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 EPPK1P58107 5090 aaKnown RBP4.1□□□□□ -1.75
TMC1-201ENST00000297784 COA5Q86WW8 74 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 SPACA4Q8TDM5 124 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
TMC1-201ENST00000297784 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.76
TMC1-201ENST00000297784 RPL37AP8A6NKH3 93 aa4.09□□□□□ -1.76
TMC1-201ENST00000297784 IGFL1Q6UW32 110 aa4.08□□□□□ -1.76
TMC1-201ENST00000297784 LORP23490 312 aaPredicted RBP4.08□□□□□ -1.76
TMC1-201ENST00000297784 A0A1B0GVY2 172 aa4.08□□□□□ -1.76
TMC1-201ENST00000297784 CASC2Q6XLA1 102 aa4.08□□□□□ -1.76
TMC1-201ENST00000297784 FAT1Q14517 4588 aa4.07□□□□□ -1.76
TMC1-201ENST00000297784 MOBPQ13875 183 aa4.07□□□□□ -1.76
TMC1-201ENST00000297784 KRTAP10-1P60331 282 aa4.06□□□□□ -1.76
TMC1-201ENST00000297784 DEFB116Q30KQ4 102 aa4.06□□□□□ -1.76
TMC1-201ENST00000297784 HSPG2P98160 4391 aa4.06□□□□□ -1.76
TMC1-201ENST00000297784 A8MWP4 228 aa4.06□□□□□ -1.76
TMC1-201ENST00000297784 A0A087WSZ3 146 aa4.05□□□□□ -1.76
TMC1-201ENST00000297784 Q6ZSA8 131 aa4.05□□□□□ -1.76
TMC1-201ENST00000297784 RPL37AP61513 92 aaKnown RBP4.04□□□□□ -1.76
TMC1-201ENST00000297784 REG3GQ6UW15 175 aa4.04□□□□□ -1.76
TMC1-201ENST00000297784 LINC00472Q9H8W2 130 aa4.04□□□□□ -1.76
TMC1-201ENST00000297784 CIRBP-AS1Q8TBR5 109 aa4.03□□□□□ -1.76
TMC1-201ENST00000297784 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
TMC1-201ENST00000297784 ASB16-AS1Q495Z4 193 aa4.02□□□□□ -1.77
TMC1-201ENST00000297784 MMP24-AS1A0A0U1RRL7 71 aa4.02□□□□□ -1.77
TMC1-201ENST00000297784 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
TMC1-201ENST00000297784 A0A0G2JQZ4 141 aa4.01□□□□□ -1.77
TMC1-201ENST00000297784 C8orf87E5RJ46 101 aa4.01□□□□□ -1.77
TMC1-201ENST00000297784 SPRR1BP22528 89 aa4.01□□□□□ -1.77
TMC1-201ENST00000297784 KRTAP13-1Q8IUC0 172 aa4□□□□□ -1.77
TMC1-201ENST00000297784 SPINK7P58062 85 aa4□□□□□ -1.77
TMC1-201ENST00000297784 SPAG11AQ6PDA7 123 aa4□□□□□ -1.77
TMC1-201ENST00000297784 A0A087X002 238 aa4□□□□□ -1.77
TMC1-201ENST00000297784 PRLHP81277 87 aa4□□□□□ -1.77
TMC1-201ENST00000297784 PSORS1C2Q9UIG4 136 aa4□□□□□ -1.77
TMC1-201ENST00000297784 RYR1P21817 5038 aa3.99□□□□□ -1.77
TMC1-201ENST00000297784 KIAA1109Q2LD37 5005 aa3.98□□□□□ -1.77
TMC1-201ENST00000297784 HRES1P13985 223 aa3.98□□□□□ -1.77
TMC1-201ENST00000297784 PKHD1L1Q86WI1 4243 aa3.98□□□□□ -1.77
TMC1-201ENST00000297784 H0Y9J4 135 aa3.98□□□□□ -1.77
TMC1-201ENST00000297784 PLA2G1BP04054 148 aaKnown RBP3.97□□□□□ -1.77
TMC1-201ENST00000297784 PCOTHQ58A44 107 aa3.97□□□□□ -1.77
TMC1-201ENST00000297784 LINC00313P59037 77 aa3.97□□□□□ -1.77
TMC1-201ENST00000297784 KRTAP17-1Q9BYP8 105 aa3.95□□□□□ -1.78
TMC1-201ENST00000297784 Q96NJ1 140 aa3.94□□□□□ -1.78
TMC1-201ENST00000297784 IGLV7-43P04211 117 aa3.93□□□□□ -1.78
TMC1-201ENST00000297784 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
TMC1-201ENST00000297784 ZNF861PO60384 105 aa3.93□□□□□ -1.78
TMC1-201ENST00000297784 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
TMC1-201ENST00000297784 TNXBP22105 4242 aa3.93□□□□□ -1.78
TMC1-201ENST00000297784 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
TMC1-201ENST00000297784 LINC01554Q52M75 96 aa3.93□□□□□ -1.78
TMC1-201ENST00000297784 SMR3BP02814 79 aaPredicted RBP3.92□□□□□ -1.78
TMC1-201ENST00000297784 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
TMC1-201ENST00000297784 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
TMC1-201ENST00000297784 MYCBP2O75592 4640 aa3.9□□□□□ -1.78
TMC1-201ENST00000297784 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.78
TMC1-201ENST00000297784 MRPL34Q9BQ48 92 aaKnown RBP3.9□□□□□ -1.78
TMC1-201ENST00000297784 A0A1B0GVX0 72 aa3.9□□□□□ -1.79
TMC1-201ENST00000297784 LINC00483Q53H64 154 aa3.9□□□□□ -1.79
TMC1-201ENST00000297784 ACYP2P14621 99 aa3.89□□□□□ -1.79
TMC1-201ENST00000297784 PRR26Q8N8Z3 221 aa3.89□□□□□ -1.79
TMC1-201ENST00000297784 FAT3Q8TDW7 4589 aa3.88□□□□□ -1.79
TMC1-201ENST00000297784 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
TMC1-201ENST00000297784 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
TMC1-201ENST00000297784 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
TMC1-201ENST00000297784 LOC100996750A0A140TA64 210 aa3.87□□□□□ -1.79
TMC1-201ENST00000297784 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
TMC1-201ENST00000297784 CDK2AP2O75956 126 aa3.87□□□□□ -1.79
TMC1-201ENST00000297784 DMAC1Q96GE9 116 aa3.86□□□□□ -1.79
TMC1-201ENST00000297784 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
TMC1-201ENST00000297784 KRTAP13-2Q52LG2 175 aa3.84□□□□□ -1.79
TMC1-201ENST00000297784 IGLV9-49A0A0B4J1Y8 123 aa3.84□□□□□ -1.79
TMC1-201ENST00000297784 A0A1B0GU69 56 aa3.84□□□□□ -1.79
TMC1-201ENST00000297784 BIRC6Q9NR09 4857 aa3.84□□□□□ -1.8
TMC1-201ENST00000297784 ABCA13Q86UQ4 5058 aa3.84□□□□□ -1.8
TMC1-201ENST00000297784 SPINK6Q6UWN8 80 aa3.83□□□□□ -1.8
TMC1-201ENST00000297784 ZNF706Q9Y5V0 76 aaPredicted RBP3.83□□□□□ -1.8
TMC1-201ENST00000297784 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
TMC1-201ENST00000297784 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
TMC1-201ENST00000297784 UQCR11O14957 56 aa3.82□□□□□ -1.8
TMC1-201ENST00000297784 Q5W150 140 aa3.82□□□□□ -1.8
TMC1-201ENST00000297784 Q5VSD8 79 aa3.82□□□□□ -1.8
TMC1-201ENST00000297784 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms