RNA–Protein interactions for RNA: ENST00000297273.8

CASD1-201, Transcript of CAS1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASD1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1-201ENST00000297273 C9orf92A6NGG3 77 aa11.11□□□□□ -0.63
CASD1-201ENST00000297273 ZCCHC13Q8WW36 166 aaKnown RBP11.11□□□□□ -0.63
CASD1-201ENST00000297273 Q5VV11 94 aa11.1□□□□□ -0.63
CASD1-201ENST00000297273 WWC2-AS2Q96NR7 200 aa11.1□□□□□ -0.63
CASD1-201ENST00000297273 Q8N1X5 172 aa11.09□□□□□ -0.63
CASD1-201ENST00000297273 SPANXA2-OT1Q8N9U9 137 aa11.08□□□□□ -0.64
CASD1-201ENST00000297273 SPRR1BP22528 89 aa11.07□□□□□ -0.64
CASD1-201ENST00000297273 IGLV7-46A0A075B6I9 117 aa11.06□□□□□ -0.64
CASD1-201ENST00000297273 ATP11AUNQ6ZP68 121 aa11.06□□□□□ -0.64
CASD1-201ENST00000297273 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
CASD1-201ENST00000297273 HRES1P13985 223 aa11.04□□□□□ -0.64
CASD1-201ENST00000297273 FAM229AH3BQW9 127 aa11.02□□□□□ -0.65
CASD1-201ENST00000297273 SPINK7P58062 85 aa11.01□□□□□ -0.65
CASD1-201ENST00000297273 Q5W150 140 aa11.01□□□□□ -0.65
CASD1-201ENST00000297273 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
CASD1-201ENST00000297273 MEGF8Q7Z7M0 2845 aa10.98□□□□□ -0.65
CASD1-201ENST00000297273 Q6ZRN7 208 aaPredicted RBP10.95□□□□□ -0.66
CASD1-201ENST00000297273 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
CASD1-201ENST00000297273 C8orf87E5RJ46 101 aa10.91□□□□□ -0.66
CASD1-201ENST00000297273 LCE6AA0A183 80 aa10.9□□□□□ -0.67
CASD1-201ENST00000297273 PRAC1Q96KF2 57 aa10.88□□□□□ -0.67
CASD1-201ENST00000297273 LCA10Q71F78 164 aa10.88□□□□□ -0.67
CASD1-201ENST00000297273 KRTAP10-1P60331 282 aa10.87□□□□□ -0.67
CASD1-201ENST00000297273 CDC42SE1Q9NRR8 79 aa10.84□□□□□ -0.67
CASD1-201ENST00000297273 LINC00304Q8N9R0 145 aa10.82□□□□□ -0.68
CASD1-201ENST00000297273 KTN1-AS1Q86SY8 53 aa10.82□□□□□ -0.68
CASD1-201ENST00000297273 KRTAP13-1Q8IUC0 172 aa10.82□□□□□ -0.68
CASD1-201ENST00000297273 MIR22HGQ0VDD5 57 aa10.82□□□□□ -0.68
CASD1-201ENST00000297273 Q75L30 129 aa10.81□□□□□ -0.68
CASD1-201ENST00000297273 UQCR11O14957 56 aa10.8□□□□□ -0.68
CASD1-201ENST00000297273 LINC01558Q9Y6Z2 57 aa10.78□□□□□ -0.68
CASD1-201ENST00000297273 LINC00483Q53H64 154 aa10.77□□□□□ -0.69
CASD1-201ENST00000297273 Q6ZR54 194 aa10.75□□□□□ -0.69
CASD1-201ENST00000297273 RBM12B-AS1Q9P1G2 102 aa10.72□□□□□ -0.69
CASD1-201ENST00000297273 K7ERS5 55 aa10.7□□□□□ -0.7
CASD1-201ENST00000297273 DNAH10Q8IVF4 4471 aa10.67□□□□□ -0.7
CASD1-201ENST00000297273 KRTAP13-2Q52LG2 175 aa10.66□□□□□ -0.7
CASD1-201ENST00000297273 ANK2Q01484 3957 aa10.64□□□□□ -0.71
CASD1-201ENST00000297273 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
CASD1-201ENST00000297273 A0A0D9SG42 100 aa10.6□□□□□ -0.71
CASD1-201ENST00000297273 ADM2Q7Z4H4 148 aa10.6□□□□□ -0.71
CASD1-201ENST00000297273 HUWE1Q7Z6Z7 4374 aaKnown RBP10.55□□□□□ -0.72
CASD1-201ENST00000297273 DMAC1Q96GE9 116 aa10.53□□□□□ -0.72
CASD1-201ENST00000297273 LYSTQ99698 3801 aa10.45□□□□□ -0.74
CASD1-201ENST00000297273 CSAG1Q6PB30 78 aa10.43□□□□□ -0.74
CASD1-201ENST00000297273 A6NN06 94 aa10.4□□□□□ -0.74
CASD1-201ENST00000297273 A0A1B0GU33 70 aa10.39□□□□□ -0.75
CASD1-201ENST00000297273 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
CASD1-201ENST00000297273 ASB16-AS1Q495Z4 193 aa10.36□□□□□ -0.75
CASD1-201ENST00000297273 PLECQ15149 4684 aaKnown RBP10.32□□□□□ -0.76
CASD1-201ENST00000297273 LINC01554Q52M75 96 aa10.3□□□□□ -0.76
CASD1-201ENST00000297273 KRTAP1-4P0C5Y4 121 aa10.28□□□□□ -0.76
CASD1-201ENST00000297273 SPINT4Q6UDR6 99 aa10.26□□□□□ -0.77
CASD1-201ENST00000297273 CMYA5Q8N3K9 4069 aa10.24□□□□□ -0.77
CASD1-201ENST00000297273 H3BS24 57 aa10.23□□□□□ -0.77
CASD1-201ENST00000297273 DNAH9Q9NYC9 4486 aa10.17□□□□□ -0.78
CASD1-201ENST00000297273 DNAH11Q96DT5 4516 aa10.12□□□□□ -0.79
CASD1-201ENST00000297273 KRTAP13-3Q3SY46 172 aa10.11□□□□□ -0.79
CASD1-201ENST00000297273 Q6ZSA8 131 aa10.11□□□□□ -0.79
CASD1-201ENST00000297273 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CASD1-201ENST00000297273 Q5VSD8 79 aa10.07□□□□□ -0.8
CASD1-201ENST00000297273 DNHD1Q96M86 4753 aa10.06□□□□□ -0.8
CASD1-201ENST00000297273 KMT2AQ03164 3969 aa10.06□□□□□ -0.8
CASD1-201ENST00000297273 STARD9Q9P2P6 4700 aa10.06□□□□□ -0.8
CASD1-201ENST00000297273 H1FX-AS1Q4G0G2 97 aa10.05□□□□□ -0.8
CASD1-201ENST00000297273 DNAH1Q9P2D7 4330 aa10.05□□□□□ -0.8
CASD1-201ENST00000297273 PRKDCP78527 4128 aaKnown RBP10.01□□□□□ -0.81
CASD1-201ENST00000297273 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
CASD1-201ENST00000297273 COX6B2Q6YFQ2 88 aa10□□□□□ -0.81
CASD1-201ENST00000297273 FRAS1Q86XX4 4008 aa9.98□□□□□ -0.81
CASD1-201ENST00000297273 DNAH3Q8TD57 4116 aa9.98□□□□□ -0.81
CASD1-201ENST00000297273 DNAH8Q96JB1 4490 aa9.95□□□□□ -0.82
CASD1-201ENST00000297273 S4R3F8 94 aa9.95□□□□□ -0.82
CASD1-201ENST00000297273 H0YAA0 97 aa9.9□□□□□ -0.82
CASD1-201ENST00000297273 J3QL48 77 aa9.88□□□□□ -0.83
CASD1-201ENST00000297273 RPL37P61927 97 aaKnown RBP9.86□□□□□ -0.83
CASD1-201ENST00000297273 A8MUU9 505 aa9.85□□□□□ -0.83
CASD1-201ENST00000297273 LRP1BQ9NZR2 4599 aa9.81□□□□□ -0.84
CASD1-201ENST00000297273 C20orf166-AS1Q96NR2 134 aa9.81□□□□□ -0.84
CASD1-201ENST00000297273 FAT1Q14517 4588 aa9.81□□□□□ -0.84
CASD1-201ENST00000297273 ROMO1P60602 79 aa9.74□□□□□ -0.85
CASD1-201ENST00000297273 DNAH17Q9UFH2 4485 aa9.74□□□□□ -0.85
CASD1-201ENST00000297273 C10orf95Q9H7T3 257 aa9.73□□□□□ -0.85
CASD1-201ENST00000297273 KRTAP25-1Q3LHN0 102 aa9.73□□□□□ -0.85
CASD1-201ENST00000297273 DNAH6Q9C0G6 4158 aa9.72□□□□□ -0.85
CASD1-201ENST00000297273 DNAH5Q8TE73 4624 aa9.71□□□□□ -0.85
CASD1-201ENST00000297273 RPS29P62273 56 aaKnown RBP9.71□□□□□ -0.86
CASD1-201ENST00000297273 KRTAP3-1Q9BYR8 98 aa9.7□□□□□ -0.86
CASD1-201ENST00000297273 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
CASD1-201ENST00000297273 R4GN34 69 aa9.67□□□□□ -0.86
CASD1-201ENST00000297273 MYCBP2O75592 4640 aa9.66□□□□□ -0.86
CASD1-201ENST00000297273 DNAH2Q9P225 4427 aa9.65□□□□□ -0.86
CASD1-201ENST00000297273 M0QZ58 72 aa9.65□□□□□ -0.86
CASD1-201ENST00000297273 P0C880 135 aa9.63□□□□□ -0.87
CASD1-201ENST00000297273 XP32Q5T750 250 aa9.61□□□□□ -0.87
CASD1-201ENST00000297273 CAMK2N1Q7Z7J9 78 aa9.55□□□□□ -0.88
CASD1-201ENST00000297273 KRTAP10-8P60410 259 aa9.53□□□□□ -0.88
CASD1-201ENST00000297273 VPS13BQ7Z7G8 4022 aa9.52□□□□□ -0.89
CASD1-201ENST00000297273 HECTD4Q9Y4D8 3996 aa9.51□□□□□ -0.89
CASD1-201ENST00000297273 A0A1B0GVY2 172 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms