RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 HIST3H2BBQ8N257 126 aa4.55□□□□□ -1.68
CNOT9-202ENST00000295701 HIST1H2BLQ99880 126 aa4.55□□□□□ -1.68
CNOT9-202ENST00000295701 RBM12B-AS1Q9P1G2 102 aa4.55□□□□□ -1.68
CNOT9-202ENST00000295701 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
CNOT9-202ENST00000295701 IGKV4-1P06312 121 aa4.54□□□□□ -1.68
CNOT9-202ENST00000295701 FABP2P12104 132 aa4.53□□□□□ -1.68
CNOT9-202ENST00000295701 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
CNOT9-202ENST00000295701 A0A1B0GV72 72 aa4.52□□□□□ -1.69
CNOT9-202ENST00000295701 KRTAP19-6Q3LI70 58 aa4.52□□□□□ -1.69
CNOT9-202ENST00000295701 H0YGX0 51 aa4.51□□□□□ -1.69
CNOT9-202ENST00000295701 COX8AP10176 69 aa4.51□□□□□ -1.69
CNOT9-202ENST00000295701 RAB37Q96AX2 223 aa4.51□□□□□ -1.69
CNOT9-202ENST00000295701 MT3P25713 68 aa4.5□□□□□ -1.69
CNOT9-202ENST00000295701 S100A2P29034 98 aa4.5□□□□□ -1.69
CNOT9-202ENST00000295701 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
CNOT9-202ENST00000295701 SNCGO76070 127 aa4.49□□□□□ -1.69
CNOT9-202ENST00000295701 C14orf144Q96I85 54 aa4.49□□□□□ -1.69
CNOT9-202ENST00000295701 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
CNOT9-202ENST00000295701 A0A0B4J2C4 111 aa4.48□□□□□ -1.69
CNOT9-202ENST00000295701 TRBV7-4A0A0J9YYF1 115 aa4.47□□□□□ -1.69
CNOT9-202ENST00000295701 DLEU1O43261 78 aa4.47□□□□□ -1.69
CNOT9-202ENST00000295701 ANKRD29Q8N6D5 301 aa4.47□□□□□ -1.69
CNOT9-202ENST00000295701 A0A1B0GX51 115 aa4.46□□□□□ -1.7
CNOT9-202ENST00000295701 C2orf91Q6ZV80 131 aa4.46□□□□□ -1.7
CNOT9-202ENST00000295701 LINC00846Q9NV44 126 aa4.45□□□□□ -1.7
CNOT9-202ENST00000295701 SPINK7P58062 85 aa4.44□□□□□ -1.7
CNOT9-202ENST00000295701 HIGD1BQ9P298 99 aa4.44□□□□□ -1.7
CNOT9-202ENST00000295701 PRO1854Q9UHT4 67 aa4.44□□□□□ -1.7
CNOT9-202ENST00000295701 A0A0A0MQY5 61 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 CCKP06307 115 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 FXYD2P54710 66 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 KRTAP6-3Q3LI67 103 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 CEND1Q8N111 149 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 MTURNQ8N3F0 131 aa4.43□□□□□ -1.7
CNOT9-202ENST00000295701 ZCCHC13Q8WW36 166 aaKnown RBP4.43□□□□□ -1.7
CNOT9-202ENST00000295701 A0A1B0GVX0 72 aa4.42□□□□□ -1.7
CNOT9-202ENST00000295701 TRACP01848 142 aa4.42□□□□□ -1.7
CNOT9-202ENST00000295701 PAM16Q9Y3D7 125 aa4.42□□□□□ -1.7
CNOT9-202ENST00000295701 C8orf87E5RJ46 101 aa4.41□□□□□ -1.7
CNOT9-202ENST00000295701 S100A6P06703 90 aa4.41□□□□□ -1.7
CNOT9-202ENST00000295701 SPATA45Q537H7 98 aa4.41□□□□□ -1.7
CNOT9-202ENST00000295701 ORMDL1Q9P0S3 153 aa4.41□□□□□ -1.7
CNOT9-202ENST00000295701 A8MWP4 228 aa4.4□□□□□ -1.71
CNOT9-202ENST00000295701 VPS25Q9BRG1 176 aa4.4□□□□□ -1.71
CNOT9-202ENST00000295701 DNAL4O96015 105 aa4.39□□□□□ -1.71
CNOT9-202ENST00000295701 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
CNOT9-202ENST00000295701 TMEM256-PLSCR3K7ERE1 68 aa4.38□□□□□ -1.71
CNOT9-202ENST00000295701 K7ERJ3 54 aa4.38□□□□□ -1.71
CNOT9-202ENST00000295701 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
CNOT9-202ENST00000295701 PSMB2P49721 201 aa4.37□□□□□ -1.71
CNOT9-202ENST00000295701 UBE2V1Q13404 147 aa4.36□□□□□ -1.71
CNOT9-202ENST00000295701 MUC12Q9UKN1 5478 aa4.35□□□□□ -1.71
CNOT9-202ENST00000295701 H3BQ85 93 aa4.35□□□□□ -1.71
CNOT9-202ENST00000295701 VAMP8Q9BV40 100 aa4.35□□□□□ -1.71
CNOT9-202ENST00000295701 NEBP20929 6669 aa4.35□□□□□ -1.71
CNOT9-202ENST00000295701 RBM3P98179 157 aaKnown RBP4.33□□□□□ -1.72
CNOT9-202ENST00000295701 LYRM7Q5U5X0 104 aa4.33□□□□□ -1.72
CNOT9-202ENST00000295701 KRTAP5-1Q6L8H4 278 aa4.33□□□□□ -1.72
CNOT9-202ENST00000295701 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
CNOT9-202ENST00000295701 S100A1P23297 94 aa4.32□□□□□ -1.72
CNOT9-202ENST00000295701 J3KT08 172 aa4.31□□□□□ -1.72
CNOT9-202ENST00000295701 COX6CP09669 75 aa4.31□□□□□ -1.72
CNOT9-202ENST00000295701 Q6ZQT0 140 aa4.31□□□□□ -1.72
CNOT9-202ENST00000295701 DSCR8Q96T75 97 aa4.31□□□□□ -1.72
CNOT9-202ENST00000295701 IGKV3D-7A0A0C4DH55 119 aa4.3□□□□□ -1.72
CNOT9-202ENST00000295701 NDUFB1O75438 58 aa4.3□□□□□ -1.72
CNOT9-202ENST00000295701 HSD52Q0P140 79 aa4.3□□□□□ -1.72
CNOT9-202ENST00000295701 H1FX-AS1Q4G0G2 97 aa4.3□□□□□ -1.72
CNOT9-202ENST00000295701 C9JAW5 83 aa4.29□□□□□ -1.72
CNOT9-202ENST00000295701 BAALC-AS2P0C853 105 aa4.29□□□□□ -1.72
CNOT9-202ENST00000295701 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
CNOT9-202ENST00000295701 Q6ZVQ6 151 aa4.28□□□□□ -1.72
CNOT9-202ENST00000295701 KRTAP5-4Q6L8H1 288 aa4.26□□□□□ -1.73
CNOT9-202ENST00000295701 MMP24-AS1A0A0U1RRL7 71 aa4.24□□□□□ -1.73
CNOT9-202ENST00000295701 PRR15Q8IV56 129 aa4.24□□□□□ -1.73
CNOT9-202ENST00000295701 KRTAP4-4Q9BYR3 166 aa4.24□□□□□ -1.73
CNOT9-202ENST00000295701 A6NN06 94 aa4.23□□□□□ -1.73
CNOT9-202ENST00000295701 MT1BP07438 61 aa4.23□□□□□ -1.73
CNOT9-202ENST00000295701 PYY3Q5JQD4 70 aa4.23□□□□□ -1.73
CNOT9-202ENST00000295701 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CNOT9-202ENST00000295701 Q5W150 140 aa4.22□□□□□ -1.73
CNOT9-202ENST00000295701 NDUFS5O43920 106 aa4.21□□□□□ -1.74
CNOT9-202ENST00000295701 TMEM254Q8TBM7 123 aa4.21□□□□□ -1.74
CNOT9-202ENST00000295701 NAA38Q9BRA0 125 aaKnown RBP4.21□□□□□ -1.74
CNOT9-202ENST00000295701 LOC110117498A0A087WWA1 95 aa4.2□□□□□ -1.74
CNOT9-202ENST00000295701 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
CNOT9-202ENST00000295701 C14orf132Q9NPU4 83 aa4.2□□□□□ -1.74
CNOT9-202ENST00000295701 hDV103S1A0JD37 113 aa4.19□□□□□ -1.74
CNOT9-202ENST00000295701 NREPQ16612 68 aa4.19□□□□□ -1.74
CNOT9-202ENST00000295701 UQCR10Q9UDW1 63 aa4.19□□□□□ -1.74
CNOT9-202ENST00000295701 MDN1Q9NU22 5596 aa4.19□□□□□ -1.74
CNOT9-202ENST00000295701 JMJD7-PLA2G4BH0Y9G9 81 aa4.18□□□□□ -1.74
CNOT9-202ENST00000295701 K7EQZ3 153 aa4.18□□□□□ -1.74
CNOT9-202ENST00000295701 C4orf26Q17RF5 130 aa4.18□□□□□ -1.74
CNOT9-202ENST00000295701 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
CNOT9-202ENST00000295701 FAM236AA0A1B0GUQ0 79 aa4.17□□□□□ -1.74
CNOT9-202ENST00000295701 FAM236BA0A1B0GV22 79 aa4.17□□□□□ -1.74
CNOT9-202ENST00000295701 KRTAP10-5P60370 271 aa4.17□□□□□ -1.74
CNOT9-202ENST00000295701 A0A1B0GW54 56 aa4.16□□□□□ -1.74
CNOT9-202ENST00000295701 ATXN8Q156A1 80 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms