RNA–Protein interactions for RNA: ENST00000295400.10

TGFA-201, Transcript of transforming growth factor alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFA, Length 4,310 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-201ENST00000295400 LINC00304Q8N9R0 145 aa6.97□□□□□ -1.29
TGFA-201ENST00000295400 A0A087X002 238 aa6.97□□□□□ -1.29
TGFA-201ENST00000295400 NOTCH2NLQ7Z3S9 236 aa6.97□□□□□ -1.29
TGFA-201ENST00000295400 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
TGFA-201ENST00000295400 HRES1P13985 223 aa6.96□□□□□ -1.29
TGFA-201ENST00000295400 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
TGFA-201ENST00000295400 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
TGFA-201ENST00000295400 Q5VV11 94 aa6.94□□□□□ -1.3
TGFA-201ENST00000295400 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
TGFA-201ENST00000295400 UQCR11O14957 56 aa6.93□□□□□ -1.3
TGFA-201ENST00000295400 FLG2Q5D862 2391 aaPredicted RBP6.93□□□□□ -1.3
TGFA-201ENST00000295400 MIR22HGQ0VDD5 57 aa6.92□□□□□ -1.3
TGFA-201ENST00000295400 ZCCHC13Q8WW36 166 aaKnown RBP6.91□□□□□ -1.3
TGFA-201ENST00000295400 SPINK7P58062 85 aa6.89□□□□□ -1.31
TGFA-201ENST00000295400 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
TGFA-201ENST00000295400 A8MU10 97 aa6.87□□□□□ -1.31
TGFA-201ENST00000295400 KRTAP10-1P60331 282 aa6.86□□□□□ -1.31
TGFA-201ENST00000295400 Q5W150 140 aa6.86□□□□□ -1.31
TGFA-201ENST00000295400 KTN1-AS1Q86SY8 53 aa6.86□□□□□ -1.31
TGFA-201ENST00000295400 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
TGFA-201ENST00000295400 Q75L30 129 aa6.83□□□□□ -1.32
TGFA-201ENST00000295400 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
TGFA-201ENST00000295400 PRAC1Q96KF2 57 aa6.81□□□□□ -1.32
TGFA-201ENST00000295400 CSMD3Q7Z407 3707 aa6.8□□□□□ -1.32
TGFA-201ENST00000295400 LINC00483Q53H64 154 aa6.8□□□□□ -1.32
TGFA-201ENST00000295400 Q6ZR54 194 aa6.78□□□□□ -1.32
TGFA-201ENST00000295400 A0A0D9SG42 100 aa6.77□□□□□ -1.32
TGFA-201ENST00000295400 LCE6AA0A183 80 aa6.77□□□□□ -1.33
TGFA-201ENST00000295400 AKAP9Q99996 3911 aa6.76□□□□□ -1.33
TGFA-201ENST00000295400 LCA10Q71F78 164 aa6.76□□□□□ -1.33
TGFA-201ENST00000295400 KRTAP13-1Q8IUC0 172 aa6.75□□□□□ -1.33
TGFA-201ENST00000295400 ANK3Q12955 4377 aaKnown RBP6.74□□□□□ -1.33
TGFA-201ENST00000295400 RBM12B-AS1Q9P1G2 102 aa6.74□□□□□ -1.33
TGFA-201ENST00000295400 COL7A1Q02388 2944 aa6.72□□□□□ -1.33
TGFA-201ENST00000295400 FBN3Q75N90 2809 aa6.71□□□□□ -1.33
TGFA-201ENST00000295400 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
TGFA-201ENST00000295400 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
TGFA-201ENST00000295400 DMAC1Q96GE9 116 aa6.66□□□□□ -1.34
TGFA-201ENST00000295400 A0A1B0GU33 70 aa6.65□□□□□ -1.35
TGFA-201ENST00000295400 LINC01554Q52M75 96 aa6.63□□□□□ -1.35
TGFA-201ENST00000295400 SPINT4Q6UDR6 99 aa6.61□□□□□ -1.35
TGFA-201ENST00000295400 CSAG1Q6PB30 78 aa6.58□□□□□ -1.36
TGFA-201ENST00000295400 ADM2Q7Z4H4 148 aa6.55□□□□□ -1.36
TGFA-201ENST00000295400 SPATA8Q6RVD6 105 aa6.54□□□□□ -1.36
TGFA-201ENST00000295400 J3QL48 77 aa6.52□□□□□ -1.37
TGFA-201ENST00000295400 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
TGFA-201ENST00000295400 A6NN06 94 aa6.49□□□□□ -1.37
TGFA-201ENST00000295400 COX6B2Q6YFQ2 88 aa6.47□□□□□ -1.37
TGFA-201ENST00000295400 ASB16-AS1Q495Z4 193 aa6.47□□□□□ -1.37
TGFA-201ENST00000295400 Q5VSD8 79 aa6.46□□□□□ -1.37
TGFA-201ENST00000295400 Q6ZSA8 131 aa6.46□□□□□ -1.37
TGFA-201ENST00000295400 KRTAP1-4P0C5Y4 121 aa6.41□□□□□ -1.38
TGFA-201ENST00000295400 S4R3F8 94 aa6.4□□□□□ -1.38
TGFA-201ENST00000295400 H1FX-AS1Q4G0G2 97 aa6.4□□□□□ -1.38
TGFA-201ENST00000295400 RPL37P61927 97 aaKnown RBP6.32□□□□□ -1.4
TGFA-201ENST00000295400 KRTAP21-3Q3LHN1 58 aa6.3□□□□□ -1.4
TGFA-201ENST00000295400 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
TGFA-201ENST00000295400 H3BS24 57 aa6.25□□□□□ -1.41
TGFA-201ENST00000295400 R4GN34 69 aa6.25□□□□□ -1.41
TGFA-201ENST00000295400 ROMO1P60602 79 aa6.24□□□□□ -1.41
TGFA-201ENST00000295400 KRTAP13-3Q3SY46 172 aa6.24□□□□□ -1.41
TGFA-201ENST00000295400 A8MUU9 505 aa6.23□□□□□ -1.41
TGFA-201ENST00000295400 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
TGFA-201ENST00000295400 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
TGFA-201ENST00000295400 HUWE1Q7Z6Z7 4374 aaKnown RBP6.21□□□□□ -1.42
TGFA-201ENST00000295400 M0QZ58 72 aa6.21□□□□□ -1.42
TGFA-201ENST00000295400 C20orf166-AS1Q96NR2 134 aa6.21□□□□□ -1.42
TGFA-201ENST00000295400 DNAH10Q8IVF4 4471 aa6.17□□□□□ -1.42
TGFA-201ENST00000295400 H0YAA0 97 aa6.16□□□□□ -1.42
TGFA-201ENST00000295400 KRTAP25-1Q3LHN0 102 aa6.15□□□□□ -1.42
TGFA-201ENST00000295400 ANK2Q01484 3957 aa6.13□□□□□ -1.43
TGFA-201ENST00000295400 M0R2T5 61 aa6.1□□□□□ -1.43
TGFA-201ENST00000295400 SEC61BP60468 96 aaKnown RBP6.09□□□□□ -1.43
TGFA-201ENST00000295400 XP32Q5T750 250 aa6.08□□□□□ -1.44
TGFA-201ENST00000295400 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
TGFA-201ENST00000295400 LYSTQ99698 3801 aa6.05□□□□□ -1.44
TGFA-201ENST00000295400 P0C880 135 aa6.02□□□□□ -1.45
TGFA-201ENST00000295400 PLECQ15149 4684 aaKnown RBP6.01□□□□□ -1.45
TGFA-201ENST00000295400 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
TGFA-201ENST00000295400 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
TGFA-201ENST00000295400 DNHD1Q96M86 4753 aa5.98□□□□□ -1.45
TGFA-201ENST00000295400 DNAH9Q9NYC9 4486 aa5.97□□□□□ -1.45
TGFA-201ENST00000295400 A0A1B0GVY2 172 aa5.93□□□□□ -1.46
TGFA-201ENST00000295400 DNAH11Q96DT5 4516 aa5.93□□□□□ -1.46
TGFA-201ENST00000295400 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
TGFA-201ENST00000295400 KRTAP10-8P60410 259 aa5.89□□□□□ -1.47
TGFA-201ENST00000295400 DNAH1Q9P2D7 4330 aa5.88□□□□□ -1.47
TGFA-201ENST00000295400 STARD9Q9P2P6 4700 aa5.83□□□□□ -1.48
TGFA-201ENST00000295400 KMT2AQ03164 3969 aa5.81□□□□□ -1.48
TGFA-201ENST00000295400 PRKDCP78527 4128 aaKnown RBP5.8□□□□□ -1.48
TGFA-201ENST00000295400 DNAH5Q8TE73 4624 aa5.8□□□□□ -1.48
TGFA-201ENST00000295400 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
TGFA-201ENST00000295400 KRTAP13-4Q3LI77 160 aa5.78□□□□□ -1.48
TGFA-201ENST00000295400 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
TGFA-201ENST00000295400 DNAH8Q96JB1 4490 aa5.77□□□□□ -1.49
TGFA-201ENST00000295400 TPRXLQ17RH7 258 aa5.76□□□□□ -1.49
TGFA-201ENST00000295400 FAT1Q14517 4588 aa5.75□□□□□ -1.49
TGFA-201ENST00000295400 FRAS1Q86XX4 4008 aa5.75□□□□□ -1.49
TGFA-201ENST00000295400 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
TGFA-201ENST00000295400 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 329 ms