RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 SPAG11AQ6PDA7 123 aa9.34□□□□□ -0.91
LRRTM1-201ENST00000295057 DNAH6Q9C0G6 4158 aa9.34□□□□□ -0.91
LRRTM1-201ENST00000295057 MMP24-AS1A0A0U1RRL7 71 aa9.33□□□□□ -0.92
LRRTM1-201ENST00000295057 PLAC8Q9NZF1 115 aa9.33□□□□□ -0.92
LRRTM1-201ENST00000295057 DNAH8Q96JB1 4490 aa9.32□□□□□ -0.92
LRRTM1-201ENST00000295057 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
LRRTM1-201ENST00000295057 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
LRRTM1-201ENST00000295057 DNAH11Q96DT5 4516 aa9.31□□□□□ -0.92
LRRTM1-201ENST00000295057 C8orf87E5RJ46 101 aa9.3□□□□□ -0.92
LRRTM1-201ENST00000295057 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
LRRTM1-201ENST00000295057 SPINK7P58062 85 aa9.29□□□□□ -0.92
LRRTM1-201ENST00000295057 DNAH5Q8TE73 4624 aa9.29□□□□□ -0.92
LRRTM1-201ENST00000295057 C1orf134Q5TEV5 83 aa9.27□□□□□ -0.93
LRRTM1-201ENST00000295057 RTL8CO15255 209 aa9.26□□□□□ -0.93
LRRTM1-201ENST00000295057 SPRR1BP22528 89 aa9.25□□□□□ -0.93
LRRTM1-201ENST00000295057 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
LRRTM1-201ENST00000295057 ALMS1Q8TCU4 4167 aa9.24□□□□□ -0.93
LRRTM1-201ENST00000295057 SPACA4Q8TDM5 124 aa9.23□□□□□ -0.93
LRRTM1-201ENST00000295057 LINC00313P59037 77 aa9.21□□□□□ -0.94
LRRTM1-201ENST00000295057 Q96NJ1 140 aa9.2□□□□□ -0.94
LRRTM1-201ENST00000295057 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
LRRTM1-201ENST00000295057 PKD1P98161 4303 aa9.2□□□□□ -0.94
LRRTM1-201ENST00000295057 IGLV5-52A0A0A0MRZ9 124 aa9.19□□□□□ -0.94
LRRTM1-201ENST00000295057 HRES1P13985 223 aa9.18□□□□□ -0.94
LRRTM1-201ENST00000295057 ASB16-AS1Q495Z4 193 aa9.18□□□□□ -0.94
LRRTM1-201ENST00000295057 PRAC1Q96KF2 57 aa9.18□□□□□ -0.94
LRRTM1-201ENST00000295057 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
LRRTM1-201ENST00000295057 IGLV9-49A0A0B4J1Y8 123 aa9.17□□□□□ -0.94
LRRTM1-201ENST00000295057 C8orf17Q9NRJ1 99 aa9.16□□□□□ -0.94
LRRTM1-201ENST00000295057 TP53AIP1Q9HCN2 124 aa9.15□□□□□ -0.94
LRRTM1-201ENST00000295057 IGHV6-1A0A0B4J1U7 121 aa9.14□□□□□ -0.95
LRRTM1-201ENST00000295057 LRP1BQ9NZR2 4599 aa9.12□□□□□ -0.95
LRRTM1-201ENST00000295057 A0A087X002 238 aa9.11□□□□□ -0.95
LRRTM1-201ENST00000295057 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
LRRTM1-201ENST00000295057 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
LRRTM1-201ENST00000295057 PSORS1C2Q9UIG4 136 aa9.1□□□□□ -0.95
LRRTM1-201ENST00000295057 ADM2Q7Z4H4 148 aa9.09□□□□□ -0.95
LRRTM1-201ENST00000295057 PRR26Q8N8Z3 221 aa9.09□□□□□ -0.95
LRRTM1-201ENST00000295057 LINC01554Q52M75 96 aa9.09□□□□□ -0.95
LRRTM1-201ENST00000295057 PKHD1P08F94 4074 aa9.08□□□□□ -0.96
LRRTM1-201ENST00000295057 A0A1B0GVX0 72 aa9.08□□□□□ -0.96
LRRTM1-201ENST00000295057 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
LRRTM1-201ENST00000295057 H3BS24 57 aa9.06□□□□□ -0.96
LRRTM1-201ENST00000295057 MRPL34Q9BQ48 92 aaKnown RBP9.06□□□□□ -0.96
LRRTM1-201ENST00000295057 ANAPC11Q9NYG5 84 aa9.04□□□□□ -0.96
LRRTM1-201ENST00000295057 KRTAP10-1P60331 282 aa9.03□□□□□ -0.96
LRRTM1-201ENST00000295057 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.97
LRRTM1-201ENST00000295057 CIRBP-AS1Q8TBR5 109 aa9.02□□□□□ -0.97
LRRTM1-201ENST00000295057 Q5W150 140 aa9.02□□□□□ -0.97
LRRTM1-201ENST00000295057 CDK2AP2O75956 126 aa9□□□□□ -0.97
LRRTM1-201ENST00000295057 VPS13BQ7Z7G8 4022 aa8.96□□□□□ -0.98
LRRTM1-201ENST00000295057 ZNF861PO60384 105 aa8.95□□□□□ -0.98
LRRTM1-201ENST00000295057 LINC00483Q53H64 154 aa8.95□□□□□ -0.98
LRRTM1-201ENST00000295057 RYR2Q92736 4967 aa8.95□□□□□ -0.98
LRRTM1-201ENST00000295057 SPINK6Q6UWN8 80 aa8.95□□□□□ -0.98
LRRTM1-201ENST00000295057 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
LRRTM1-201ENST00000295057 KRTAP13-3Q3SY46 172 aa8.93□□□□□ -0.98
LRRTM1-201ENST00000295057 ACYP2P14621 99 aa8.92□□□□□ -0.98
LRRTM1-201ENST00000295057 IGLV7-43P04211 117 aa8.92□□□□□ -0.98
LRRTM1-201ENST00000295057 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
LRRTM1-201ENST00000295057 Q6ZSA8 131 aa8.91□□□□□ -0.98
LRRTM1-201ENST00000295057 A0A1B0GU69 56 aa8.89□□□□□ -0.99
LRRTM1-201ENST00000295057 ZNF706Q9Y5V0 76 aaPredicted RBP8.85□□□□□ -0.99
LRRTM1-201ENST00000295057 FAT1Q14517 4588 aa8.85□□□□□ -0.99
LRRTM1-201ENST00000295057 RETNLBQ9BQ08 111 aa8.84□□□□□ -0.99
LRRTM1-201ENST00000295057 MIR22HGQ0VDD5 57 aa8.84□□□□□ -0.99
LRRTM1-201ENST00000295057 CSAG1Q6PB30 78 aa8.83□□□□□ -1
LRRTM1-201ENST00000295057 DMAC1Q96GE9 116 aa8.82□□□□□ -1
LRRTM1-201ENST00000295057 APOBP04114 4563 aaKnown RBP8.81□□□□□ -1
LRRTM1-201ENST00000295057 UQCR11O14957 56 aa8.8□□□□□ -1
LRRTM1-201ENST00000295057 RYR3Q15413 4870 aa8.8□□□□□ -1
LRRTM1-201ENST00000295057 SMR3BP02814 79 aaPredicted RBP8.76□□□□□ -1.01
LRRTM1-201ENST00000295057 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
LRRTM1-201ENST00000295057 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.01
LRRTM1-201ENST00000295057 IGKV2-30P06310 120 aa8.69□□□□□ -1.02
LRRTM1-201ENST00000295057 KRTAP1-4P0C5Y4 121 aa8.68□□□□□ -1.02
LRRTM1-201ENST00000295057 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
LRRTM1-201ENST00000295057 SSBP3-AS1Q7Z2R9 100 aa8.62□□□□□ -1.03
LRRTM1-201ENST00000295057 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
LRRTM1-201ENST00000295057 KRTAP16-1A8MUX0 517 aa8.58□□□□□ -1.04
LRRTM1-201ENST00000295057 HSPG2P98160 4391 aa8.55□□□□□ -1.04
LRRTM1-201ENST00000295057 SPINK1P00995 79 aa8.54□□□□□ -1.04
LRRTM1-201ENST00000295057 KRTAP10-4P60372 401 aaPredicted RBP8.54□□□□□ -1.04
LRRTM1-201ENST00000295057 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
LRRTM1-201ENST00000295057 ROMO1P60602 79 aa8.51□□□□□ -1.05
LRRTM1-201ENST00000295057 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
LRRTM1-201ENST00000295057 LRP1Q07954 4544 aaKnown RBP8.5□□□□□ -1.05
LRRTM1-201ENST00000295057 PKHD1L1Q86WI1 4243 aa8.49□□□□□ -1.05
LRRTM1-201ENST00000295057 EPPK1P58107 5090 aaKnown RBP8.48□□□□□ -1.05
LRRTM1-201ENST00000295057 Q8N1X5 172 aa8.47□□□□□ -1.05
LRRTM1-201ENST00000295057 KIAA1109Q2LD37 5005 aa8.47□□□□□ -1.05
LRRTM1-201ENST00000295057 RYR1P21817 5038 aa8.47□□□□□ -1.05
LRRTM1-201ENST00000295057 A8MUU9 505 aa8.46□□□□□ -1.06
LRRTM1-201ENST00000295057 KRTAP17-1Q9BYP8 105 aa8.42□□□□□ -1.06
LRRTM1-201ENST00000295057 LINC00304Q8N9R0 145 aa8.41□□□□□ -1.06
LRRTM1-201ENST00000295057 H0YAA0 97 aa8.39□□□□□ -1.07
LRRTM1-201ENST00000295057 TNXBP22105 4242 aa8.36□□□□□ -1.07
LRRTM1-201ENST00000295057 MYCBP2O75592 4640 aa8.35□□□□□ -1.07
LRRTM1-201ENST00000295057 Q5VSD8 79 aa8.34□□□□□ -1.07
LRRTM1-201ENST00000295057 FLG2Q5D862 2391 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms