RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 IGLV7-46A0A075B6I9 117 aa7.81□□□□□ -1.16
ZIC3-201ENST00000287538 H0Y9J4 135 aa7.81□□□□□ -1.16
ZIC3-201ENST00000287538 DYNC2H1Q8NCM8 4307 aaKnown RBP7.8□□□□□ -1.16
ZIC3-201ENST00000287538 A8MWP4 228 aa7.8□□□□□ -1.16
ZIC3-201ENST00000287538 DNAH11Q96DT5 4516 aa7.79□□□□□ -1.16
ZIC3-201ENST00000287538 SPINK6Q6UWN8 80 aa7.79□□□□□ -1.16
ZIC3-201ENST00000287538 HYDINQ4G0P3 5121 aa7.78□□□□□ -1.16
ZIC3-201ENST00000287538 SPINK7P58062 85 aa7.77□□□□□ -1.16
ZIC3-201ENST00000287538 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
ZIC3-201ENST00000287538 LINC01558Q9Y6Z2 57 aa7.77□□□□□ -1.17
ZIC3-201ENST00000287538 IGLV8-61A0A075B6I0 122 aa7.76□□□□□ -1.17
ZIC3-201ENST00000287538 SMR3BP02814 79 aaPredicted RBP7.76□□□□□ -1.17
ZIC3-201ENST00000287538 LINC00472Q9H8W2 130 aa7.75□□□□□ -1.17
ZIC3-201ENST00000287538 ZNF861PO60384 105 aa7.75□□□□□ -1.17
ZIC3-201ENST00000287538 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
ZIC3-201ENST00000287538 PLAC8Q9NZF1 115 aa7.74□□□□□ -1.17
ZIC3-201ENST00000287538 FRAS1Q86XX4 4008 aa7.74□□□□□ -1.17
ZIC3-201ENST00000287538 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
ZIC3-201ENST00000287538 HECTD4Q9Y4D8 3996 aa7.73□□□□□ -1.17
ZIC3-201ENST00000287538 IGLV7-43P04211 117 aa7.71□□□□□ -1.18
ZIC3-201ENST00000287538 HRES1P13985 223 aa7.69□□□□□ -1.18
ZIC3-201ENST00000287538 KRTAP13-1Q8IUC0 172 aa7.68□□□□□ -1.18
ZIC3-201ENST00000287538 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
ZIC3-201ENST00000287538 C8orf87E5RJ46 101 aa7.68□□□□□ -1.18
ZIC3-201ENST00000287538 PRAC1Q96KF2 57 aa7.68□□□□□ -1.18
ZIC3-201ENST00000287538 DNAH17Q9UFH2 4485 aa7.67□□□□□ -1.18
ZIC3-201ENST00000287538 CDK2AP2O75956 126 aa7.66□□□□□ -1.18
ZIC3-201ENST00000287538 IGHV6-1A0A0B4J1U7 121 aa7.66□□□□□ -1.18
ZIC3-201ENST00000287538 LINC00313P59037 77 aa7.66□□□□□ -1.18
ZIC3-201ENST00000287538 KRTAP21-3Q3LHN1 58 aa7.66□□□□□ -1.18
ZIC3-201ENST00000287538 TP53AIP1Q9HCN2 124 aa7.65□□□□□ -1.18
ZIC3-201ENST00000287538 C4orf48Q5BLP8 95 aa7.64□□□□□ -1.19
ZIC3-201ENST00000287538 SPRR1BP22528 89 aa7.64□□□□□ -1.19
ZIC3-201ENST00000287538 PRR26Q8N8Z3 221 aa7.63□□□□□ -1.19
ZIC3-201ENST00000287538 DNAH8Q96JB1 4490 aa7.62□□□□□ -1.19
ZIC3-201ENST00000287538 ADM2Q7Z4H4 148 aa7.61□□□□□ -1.19
ZIC3-201ENST00000287538 C8orf17Q9NRJ1 99 aa7.61□□□□□ -1.19
ZIC3-201ENST00000287538 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
ZIC3-201ENST00000287538 LRP1BQ9NZR2 4599 aa7.6□□□□□ -1.19
ZIC3-201ENST00000287538 DNAH5Q8TE73 4624 aa7.6□□□□□ -1.19
ZIC3-201ENST00000287538 A0A087X002 238 aa7.59□□□□□ -1.19
ZIC3-201ENST00000287538 PLA2G1BP04054 148 aaKnown RBP7.57□□□□□ -1.2
ZIC3-201ENST00000287538 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
ZIC3-201ENST00000287538 Q96NJ1 140 aa7.57□□□□□ -1.2
ZIC3-201ENST00000287538 PKHD1P08F94 4074 aa7.57□□□□□ -1.2
ZIC3-201ENST00000287538 RETNLBQ9BQ08 111 aa7.55□□□□□ -1.2
ZIC3-201ENST00000287538 DMBT1Q9UGM3 2413 aaPredicted RBP7.54□□□□□ -1.2
ZIC3-201ENST00000287538 MRPL34Q9BQ48 92 aaKnown RBP7.53□□□□□ -1.2
ZIC3-201ENST00000287538 LINC00483Q53H64 154 aa7.53□□□□□ -1.2
ZIC3-201ENST00000287538 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
ZIC3-201ENST00000287538 A0A1B0GVX0 72 aa7.52□□□□□ -1.21
ZIC3-201ENST00000287538 LINC01554Q52M75 96 aa7.52□□□□□ -1.21
ZIC3-201ENST00000287538 NOTCH2NLQ7Z3S9 236 aa7.51□□□□□ -1.21
ZIC3-201ENST00000287538 KMT2CQ8NEZ4 4911 aaKnown RBP7.5□□□□□ -1.21
ZIC3-201ENST00000287538 FAT1Q14517 4588 aa7.49□□□□□ -1.21
ZIC3-201ENST00000287538 TYMSOSQ8TAI1 123 aa7.49□□□□□ -1.21
ZIC3-201ENST00000287538 Q6ZSA8 131 aa7.48□□□□□ -1.21
ZIC3-201ENST00000287538 ACYP2P14621 99 aa7.48□□□□□ -1.21
ZIC3-201ENST00000287538 KRTAP13-2Q52LG2 175 aa7.48□□□□□ -1.21
ZIC3-201ENST00000287538 H3BS24 57 aa7.47□□□□□ -1.21
ZIC3-201ENST00000287538 FAT2Q9NYQ8 4349 aa7.47□□□□□ -1.21
ZIC3-201ENST00000287538 A0A1B0GU69 56 aa7.46□□□□□ -1.22
ZIC3-201ENST00000287538 Q5W150 140 aa7.46□□□□□ -1.22
ZIC3-201ENST00000287538 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
ZIC3-201ENST00000287538 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
ZIC3-201ENST00000287538 ALMS1Q8TCU4 4167 aa7.44□□□□□ -1.22
ZIC3-201ENST00000287538 DYNC1H1Q14204 4646 aaKnown RBP7.43□□□□□ -1.22
ZIC3-201ENST00000287538 PKD1P98161 4303 aa7.42□□□□□ -1.22
ZIC3-201ENST00000287538 SPATA8Q6RVD6 105 aa7.4□□□□□ -1.22
ZIC3-201ENST00000287538 MIR22HGQ0VDD5 57 aa7.39□□□□□ -1.23
ZIC3-201ENST00000287538 KRTAP1-4P0C5Y4 121 aa7.38□□□□□ -1.23
ZIC3-201ENST00000287538 CSAG1Q6PB30 78 aa7.37□□□□□ -1.23
ZIC3-201ENST00000287538 DMAC1Q96GE9 116 aa7.36□□□□□ -1.23
ZIC3-201ENST00000287538 UQCR11O14957 56 aa7.36□□□□□ -1.23
ZIC3-201ENST00000287538 KRTAP13-3Q3SY46 172 aa7.36□□□□□ -1.23
ZIC3-201ENST00000287538 LINC00304Q8N9R0 145 aa7.33□□□□□ -1.24
ZIC3-201ENST00000287538 C9orf92A6NGG3 77 aa7.32□□□□□ -1.24
ZIC3-201ENST00000287538 RYR2Q92736 4967 aa7.32□□□□□ -1.24
ZIC3-201ENST00000287538 A0A1B0GVY2 172 aa7.31□□□□□ -1.24
ZIC3-201ENST00000287538 FAM229AH3BQW9 127 aa7.29□□□□□ -1.24
ZIC3-201ENST00000287538 IGKV2D-30A0A075B6S6 120 aa7.26□□□□□ -1.25
ZIC3-201ENST00000287538 IGKV2-30P06310 120 aa7.26□□□□□ -1.25
ZIC3-201ENST00000287538 SPINK1P00995 79 aa7.24□□□□□ -1.25
ZIC3-201ENST00000287538 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
ZIC3-201ENST00000287538 RYR3Q15413 4870 aa7.23□□□□□ -1.25
ZIC3-201ENST00000287538 Q5VSD8 79 aa7.22□□□□□ -1.25
ZIC3-201ENST00000287538 KIAA1109Q2LD37 5005 aa7.21□□□□□ -1.26
ZIC3-201ENST00000287538 LRP1Q07954 4544 aaKnown RBP7.19□□□□□ -1.26
ZIC3-201ENST00000287538 Q8N1X5 172 aa7.11□□□□□ -1.27
ZIC3-201ENST00000287538 KRTAP10-4P60372 401 aaPredicted RBP7.1□□□□□ -1.27
ZIC3-201ENST00000287538 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
ZIC3-201ENST00000287538 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
ZIC3-201ENST00000287538 KRTAP16-1A8MUX0 517 aa7.04□□□□□ -1.28
ZIC3-201ENST00000287538 EPPK1P58107 5090 aaKnown RBP7.04□□□□□ -1.28
ZIC3-201ENST00000287538 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
ZIC3-201ENST00000287538 ROMO1P60602 79 aa7.03□□□□□ -1.28
ZIC3-201ENST00000287538 A8MUU9 505 aa7.03□□□□□ -1.28
ZIC3-201ENST00000287538 H0YAA0 97 aa7.02□□□□□ -1.29
ZIC3-201ENST00000287538 RYR1P21817 5038 aa7.01□□□□□ -1.29
ZIC3-201ENST00000287538 HSPG2P98160 4391 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms