RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
ERCC3-201ENST00000285398 TP53AIP1Q9HCN2 124 aa6.47□□□□□ -1.37
ERCC3-201ENST00000285398 Q6ZRN7 208 aaPredicted RBP6.47□□□□□ -1.37
ERCC3-201ENST00000285398 MMP24-AS1A0A0U1RRL7 71 aa6.46□□□□□ -1.37
ERCC3-201ENST00000285398 PCOTHQ58A44 107 aa6.46□□□□□ -1.37
ERCC3-201ENST00000285398 Q6ZR54 194 aa6.46□□□□□ -1.38
ERCC3-201ENST00000285398 DNAH17Q9UFH2 4485 aa6.46□□□□□ -1.38
ERCC3-201ENST00000285398 RYR2Q92736 4967 aa6.45□□□□□ -1.38
ERCC3-201ENST00000285398 FAT2Q9NYQ8 4349 aa6.45□□□□□ -1.38
ERCC3-201ENST00000285398 LINC00313P59037 77 aa6.45□□□□□ -1.38
ERCC3-201ENST00000285398 RYR3Q15413 4870 aa6.44□□□□□ -1.38
ERCC3-201ENST00000285398 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
ERCC3-201ENST00000285398 SPRR1BP22528 89 aa6.43□□□□□ -1.38
ERCC3-201ENST00000285398 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
ERCC3-201ENST00000285398 SPINK7P58062 85 aa6.42□□□□□ -1.38
ERCC3-201ENST00000285398 C1orf134Q5TEV5 83 aa6.42□□□□□ -1.38
ERCC3-201ENST00000285398 DNAH11Q96DT5 4516 aa6.42□□□□□ -1.38
ERCC3-201ENST00000285398 IGKV2-24A0A0C4DH68 120 aa6.4□□□□□ -1.38
ERCC3-201ENST00000285398 ASB16-AS1Q495Z4 193 aa6.4□□□□□ -1.38
ERCC3-201ENST00000285398 DNAH5Q8TE73 4624 aa6.4□□□□□ -1.39
ERCC3-201ENST00000285398 A0A087WTM6 91 aa6.4□□□□□ -1.39
ERCC3-201ENST00000285398 A0A096LNI7 61 aa6.4□□□□□ -1.39
ERCC3-201ENST00000285398 HRES1P13985 223 aa6.4□□□□□ -1.39
ERCC3-201ENST00000285398 RTL8CO15255 209 aa6.39□□□□□ -1.39
ERCC3-201ENST00000285398 CHTF8P0CG12 524 aa6.39□□□□□ -1.39
ERCC3-201ENST00000285398 SRRM2Q9UQ35 2752 aaKnown RBP6.38□□□□□ -1.39
ERCC3-201ENST00000285398 PKD1P98161 4303 aa6.37□□□□□ -1.39
ERCC3-201ENST00000285398 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
ERCC3-201ENST00000285398 PANO1I0J062 215 aa6.35□□□□□ -1.39
ERCC3-201ENST00000285398 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
ERCC3-201ENST00000285398 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
ERCC3-201ENST00000285398 KRTAP11-1Q8IUC1 163 aa6.34□□□□□ -1.39
ERCC3-201ENST00000285398 ZNF706Q9Y5V0 76 aaPredicted RBP6.34□□□□□ -1.39
ERCC3-201ENST00000285398 Q96NJ1 140 aa6.33□□□□□ -1.4
ERCC3-201ENST00000285398 C14orf177Q52M58 125 aa6.33□□□□□ -1.4
ERCC3-201ENST00000285398 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
ERCC3-201ENST00000285398 MRPL34Q9BQ48 92 aaKnown RBP6.31□□□□□ -1.4
ERCC3-201ENST00000285398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.31□□□□□ -1.4
ERCC3-201ENST00000285398 IGLV5-52A0A0A0MRZ9 124 aa6.3□□□□□ -1.4
ERCC3-201ENST00000285398 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
ERCC3-201ENST00000285398 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
ERCC3-201ENST00000285398 IGHV6-1A0A0B4J1U7 121 aa6.3□□□□□ -1.4
ERCC3-201ENST00000285398 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
ERCC3-201ENST00000285398 ACYP2P14621 99 aa6.28□□□□□ -1.4
ERCC3-201ENST00000285398 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
ERCC3-201ENST00000285398 DYNC1H1Q14204 4646 aaKnown RBP6.26□□□□□ -1.41
ERCC3-201ENST00000285398 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
ERCC3-201ENST00000285398 A0A087X002 238 aa6.26□□□□□ -1.41
ERCC3-201ENST00000285398 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
ERCC3-201ENST00000285398 KRTAP10-1P60331 282 aa6.23□□□□□ -1.41
ERCC3-201ENST00000285398 EPPK1P58107 5090 aaKnown RBP6.23□□□□□ -1.41
ERCC3-201ENST00000285398 A0A1B0GU69 56 aa6.22□□□□□ -1.41
ERCC3-201ENST00000285398 SPACA4Q8TDM5 124 aa6.22□□□□□ -1.41
ERCC3-201ENST00000285398 ADM2Q7Z4H4 148 aa6.22□□□□□ -1.41
ERCC3-201ENST00000285398 SPATA8Q6RVD6 105 aa6.21□□□□□ -1.42
ERCC3-201ENST00000285398 FAT1Q14517 4588 aa6.2□□□□□ -1.42
ERCC3-201ENST00000285398 LINC00483Q53H64 154 aa6.19□□□□□ -1.42
ERCC3-201ENST00000285398 NOTCH2NLQ7Z3S9 236 aa6.19□□□□□ -1.42
ERCC3-201ENST00000285398 VPS13BQ7Z7G8 4022 aa6.19□□□□□ -1.42
ERCC3-201ENST00000285398 DMAC1Q96GE9 116 aa6.19□□□□□ -1.42
ERCC3-201ENST00000285398 KRTAP13-3Q3SY46 172 aa6.18□□□□□ -1.42
ERCC3-201ENST00000285398 Q5W150 140 aa6.18□□□□□ -1.42
ERCC3-201ENST00000285398 CIRBP-AS1Q8TBR5 109 aa6.18□□□□□ -1.42
ERCC3-201ENST00000285398 UQCR11O14957 56 aa6.17□□□□□ -1.42
ERCC3-201ENST00000285398 MIR22HGQ0VDD5 57 aa6.17□□□□□ -1.42
ERCC3-201ENST00000285398 APOBP04114 4563 aaKnown RBP6.16□□□□□ -1.42
ERCC3-201ENST00000285398 A0A1B0GVY2 172 aa6.16□□□□□ -1.42
ERCC3-201ENST00000285398 KIAA1109Q2LD37 5005 aa6.15□□□□□ -1.42
ERCC3-201ENST00000285398 RETNLBQ9BQ08 111 aa6.12□□□□□ -1.43
ERCC3-201ENST00000285398 PSORS1C2Q9UIG4 136 aa6.12□□□□□ -1.43
ERCC3-201ENST00000285398 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
ERCC3-201ENST00000285398 SPINK6Q6UWN8 80 aa6.12□□□□□ -1.43
ERCC3-201ENST00000285398 Q6ZSA8 131 aa6.12□□□□□ -1.43
ERCC3-201ENST00000285398 FAM229AH3BQW9 127 aa6.09□□□□□ -1.43
ERCC3-201ENST00000285398 CSAG1Q6PB30 78 aa6.08□□□□□ -1.44
ERCC3-201ENST00000285398 SEC61BP60468 96 aaKnown RBP6.07□□□□□ -1.44
ERCC3-201ENST00000285398 HSPG2P98160 4391 aa6.07□□□□□ -1.44
ERCC3-201ENST00000285398 ANAPC11Q9NYG5 84 aa6.06□□□□□ -1.44
ERCC3-201ENST00000285398 RYR1P21817 5038 aa6.05□□□□□ -1.44
ERCC3-201ENST00000285398 IGKV2-30P06310 120 aa6.05□□□□□ -1.44
ERCC3-201ENST00000285398 ZNF861PO60384 105 aa6.04□□□□□ -1.44
ERCC3-201ENST00000285398 FLG2Q5D862 2391 aaPredicted RBP6.01□□□□□ -1.45
ERCC3-201ENST00000285398 IGLV7-43P04211 117 aa6□□□□□ -1.45
ERCC3-201ENST00000285398 KRTAP17-1Q9BYP8 105 aa5.98□□□□□ -1.45
ERCC3-201ENST00000285398 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
ERCC3-201ENST00000285398 LRP1Q07954 4544 aaKnown RBP5.97□□□□□ -1.45
ERCC3-201ENST00000285398 SSBP3-AS1Q7Z2R9 100 aa5.96□□□□□ -1.45
ERCC3-201ENST00000285398 IGKV2D-30A0A075B6S6 120 aa5.93□□□□□ -1.46
ERCC3-201ENST00000285398 KRTAP10-4P60372 401 aaPredicted RBP5.91□□□□□ -1.46
ERCC3-201ENST00000285398 ROMO1P60602 79 aa5.91□□□□□ -1.46
ERCC3-201ENST00000285398 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
ERCC3-201ENST00000285398 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
ERCC3-201ENST00000285398 Q5VSD8 79 aa5.89□□□□□ -1.47
ERCC3-201ENST00000285398 A8MUU9 505 aa5.88□□□□□ -1.47
ERCC3-201ENST00000285398 SPINK1P00995 79 aa5.88□□□□□ -1.47
ERCC3-201ENST00000285398 BIRC6Q9NR09 4857 aa5.87□□□□□ -1.47
ERCC3-201ENST00000285398 ABCA13Q86UQ4 5058 aa5.87□□□□□ -1.47
ERCC3-201ENST00000285398 KRTAP1-4P0C5Y4 121 aa5.87□□□□□ -1.47
ERCC3-201ENST00000285398 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
ERCC3-201ENST00000285398 KRTAP13-2Q52LG2 175 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms