RNA–Protein interactions for RNA: ENST00000282878.5

RAB3C-201, Transcript of RAB3C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3C, Length 8,896 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3C-201ENST00000282878 KRTAP3-3Q9BYR6 98 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 KRTAP3-2Q9BYR7 98 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 FLNBO75369 2602 aaKnown RBP2.32□□□□□ -2.04
RAB3C-201ENST00000282878 C9orf163Q8N9P6 203 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 RYR3Q15413 4870 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 HIVEP1P15822 2718 aa2.32□□□□□ -2.04
RAB3C-201ENST00000282878 GCN1Q92616 2671 aaKnown RBP2.32□□□□□ -2.04
RAB3C-201ENST00000282878 LRP1BQ9NZR2 4599 aa2.31□□□□□ -2.04
RAB3C-201ENST00000282878 GVQW2A0A096LPI5 108 aaPredicted RBP2.31□□□□□ -2.04
RAB3C-201ENST00000282878 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.31□□□□□ -2.04
RAB3C-201ENST00000282878 DNAH9Q9NYC9 4486 aa2.31□□□□□ -2.04
RAB3C-201ENST00000282878 Q8N9P0 234 aaPredicted RBP2.31□□□□□ -2.04
RAB3C-201ENST00000282878 Q6ZR54 194 aa2.3□□□□□ -2.04
RAB3C-201ENST00000282878 MAST4O15021 2626 aa2.3□□□□□ -2.04
RAB3C-201ENST00000282878 M0R2T5 61 aa2.3□□□□□ -2.04
RAB3C-201ENST00000282878 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
RAB3C-201ENST00000282878 C9orf92A6NGG3 77 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 ZNF861PO60384 105 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 A0A1B0GU33 70 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 VWFP04275 2813 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 OBSCN-AS1Q96MR7 158 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 A0A1W2PNM2 257 aa2.29□□□□□ -2.04
RAB3C-201ENST00000282878 TENM1Q9UKZ4 2725 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 KIAA1109Q2LD37 5005 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 DSCR10P59022 87 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 Q6ZSA8 131 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 K7EQZ3 153 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 FAT1Q14517 4588 aa2.28□□□□□ -2.04
RAB3C-201ENST00000282878 KRTAP4-16G5E9R7 235 aaPredicted RBP2.28□□□□□ -2.04
RAB3C-201ENST00000282878 SMR3BP02814 79 aaPredicted RBP2.28□□□□□ -2.04
RAB3C-201ENST00000282878 PSORS1C2Q9UIG4 136 aa2.28□□□□□ -2.05
RAB3C-201ENST00000282878 TEP1Q99973 2627 aaKnown RBP2.27□□□□□ -2.05
RAB3C-201ENST00000282878 KRTAP10-2P60368 255 aa2.27□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
RAB3C-201ENST00000282878 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
RAB3C-201ENST00000282878 R4GN34 69 aa2.27□□□□□ -2.05
RAB3C-201ENST00000282878 A0A0D9SG42 100 aa2.26□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH8Q96JB1 4490 aa2.26□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH11Q96DT5 4516 aa2.26□□□□□ -2.05
RAB3C-201ENST00000282878 SETXQ7Z333 2677 aaKnown RBP2.26□□□□□ -2.05
RAB3C-201ENST00000282878 IGLV5-48A0A075B6I7 105 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 STARD9Q9P2P6 4700 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 TRRAPQ9Y4A5 3859 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 KCNQ1DNQ9H478 68 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 ATRQ13535 2644 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH17Q9UFH2 4485 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 IGFL1Q6UW32 110 aa2.25□□□□□ -2.05
RAB3C-201ENST00000282878 DNAH5Q8TE73 4624 aa2.24□□□□□ -2.05
RAB3C-201ENST00000282878 NSD1Q96L73 2696 aaPredicted RBP2.24□□□□□ -2.05
RAB3C-201ENST00000282878 A0A087WTM6 91 aa2.24□□□□□ -2.05
RAB3C-201ENST00000282878 KRTAP17-1Q9BYP8 105 aa2.24□□□□□ -2.05
RAB3C-201ENST00000282878 SACSQ9NZJ4 4579 aa2.23□□□□□ -2.05
RAB3C-201ENST00000282878 Q8N1X5 172 aa2.23□□□□□ -2.05
RAB3C-201ENST00000282878 S4R3F8 94 aa2.23□□□□□ -2.05
RAB3C-201ENST00000282878 VPS13DQ5THJ4 4388 aa2.22□□□□□ -2.05
RAB3C-201ENST00000282878 PCLOQ9Y6V0 5065 aa2.22□□□□□ -2.05
RAB3C-201ENST00000282878 Q6ZRN7 208 aaPredicted RBP2.22□□□□□ -2.05
RAB3C-201ENST00000282878 KRTAP10-1P60331 282 aa2.22□□□□□ -2.05
RAB3C-201ENST00000282878 PLAC4Q8WY50 150 aa2.21□□□□□ -2.06
RAB3C-201ENST00000282878 STAB1Q9NY15 2570 aa2.21□□□□□ -2.06
RAB3C-201ENST00000282878 SPINK7P58062 85 aa2.21□□□□□ -2.06
RAB3C-201ENST00000282878 ABCA13Q86UQ4 5058 aa2.21□□□□□ -2.06
RAB3C-201ENST00000282878 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
RAB3C-201ENST00000282878 SPRR4Q96PI1 79 aa2.2□□□□□ -2.06
RAB3C-201ENST00000282878 SRRM2Q9UQ35 2752 aaKnown RBP2.2□□□□□ -2.06
RAB3C-201ENST00000282878 KMT2CQ8NEZ4 4911 aaKnown RBP2.19□□□□□ -2.06
RAB3C-201ENST00000282878 SPRR1AP35321 89 aa2.19□□□□□ -2.06
RAB3C-201ENST00000282878 CNBPP62633 177 aaKnown RBP2.19□□□□□ -2.06
RAB3C-201ENST00000282878 SPATA8Q6RVD6 105 aa2.19□□□□□ -2.06
RAB3C-201ENST00000282878 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
RAB3C-201ENST00000282878 TENM3Q9P273 2699 aa2.18□□□□□ -2.06
RAB3C-201ENST00000282878 NOTCH1P46531 2555 aa2.18□□□□□ -2.06
RAB3C-201ENST00000282878 H1FX-AS1Q4G0G2 97 aa2.18□□□□□ -2.06
RAB3C-201ENST00000282878 MGAM2Q2M2H8 2515 aa2.18□□□□□ -2.06
RAB3C-201ENST00000282878 COL6A5A8TX70 2615 aa2.17□□□□□ -2.06
RAB3C-201ENST00000282878 MEGF8Q7Z7M0 2845 aa2.17□□□□□ -2.06
RAB3C-201ENST00000282878 Q5W150 140 aa2.15□□□□□ -2.06
RAB3C-201ENST00000282878 ZCCHC13Q8WW36 166 aaKnown RBP2.15□□□□□ -2.07
RAB3C-201ENST00000282878 A8MU10 97 aa2.14□□□□□ -2.07
RAB3C-201ENST00000282878 DYNC2H1Q8NCM8 4307 aaKnown RBP2.13□□□□□ -2.07
RAB3C-201ENST00000282878 KRTAP13-2Q52LG2 175 aa2.13□□□□□ -2.07
RAB3C-201ENST00000282878 FBN3Q75N90 2809 aa2.13□□□□□ -2.07
RAB3C-201ENST00000282878 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
RAB3C-201ENST00000282878 KRTAP13-1Q8IUC0 172 aa2.13□□□□□ -2.07
RAB3C-201ENST00000282878 MMP24-AS1A0A0U1RRL7 71 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 CSMD3Q7Z407 3707 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 PKD1L1Q8TDX9 2849 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 TENM2Q9NT68 2774 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 RPS29P62273 56 aaKnown RBP2.12□□□□□ -2.07
RAB3C-201ENST00000282878 Q5VSD8 79 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 APOBP04114 4563 aaKnown RBP2.12□□□□□ -2.07
RAB3C-201ENST00000282878 PLAC8Q9NZF1 115 aa2.12□□□□□ -2.07
RAB3C-201ENST00000282878 NBEAL1Q6ZS30 2694 aa2.11□□□□□ -2.07
RAB3C-201ENST00000282878 LINC00472Q9H8W2 130 aa2.11□□□□□ -2.07
RAB3C-201ENST00000282878 RPL37P61927 97 aaKnown RBP2.11□□□□□ -2.07
RAB3C-201ENST00000282878 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
RAB3C-201ENST00000282878 M0QZ58 72 aa2.1□□□□□ -2.07
RAB3C-201ENST00000282878 KRTAP19-4Q3LI73 84 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms