RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 SPRR4Q96PI1 79 aa6.62□□□□□ -1.35
GGPS1-201ENST00000282841 LINC00313P59037 77 aa6.62□□□□□ -1.35
GGPS1-201ENST00000282841 Q8N9L7 120 aa6.61□□□□□ -1.35
GGPS1-201ENST00000282841 BPY2O14599 106 aa6.6□□□□□ -1.35
GGPS1-201ENST00000282841 LINC01554Q52M75 96 aa6.59□□□□□ -1.35
GGPS1-201ENST00000282841 PDE6GP18545 87 aa6.59□□□□□ -1.35
GGPS1-201ENST00000282841 MOBPQ13875 183 aa6.59□□□□□ -1.36
GGPS1-201ENST00000282841 PRR4Q16378 134 aa6.59□□□□□ -1.36
GGPS1-201ENST00000282841 Q8NBF4 154 aa6.58□□□□□ -1.36
GGPS1-201ENST00000282841 PRAC1Q96KF2 57 aa6.58□□□□□ -1.36
GGPS1-201ENST00000282841 A0A087WSZ3 146 aa6.58□□□□□ -1.36
GGPS1-201ENST00000282841 A6NED7 52 aa6.58□□□□□ -1.36
GGPS1-201ENST00000282841 SPRR1BP22528 89 aa6.56□□□□□ -1.36
GGPS1-201ENST00000282841 EPPK1P58107 5090 aaKnown RBP6.56□□□□□ -1.36
GGPS1-201ENST00000282841 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
GGPS1-201ENST00000282841 ZNF706Q9Y5V0 76 aaPredicted RBP6.55□□□□□ -1.36
GGPS1-201ENST00000282841 A0A087X002 238 aa6.54□□□□□ -1.36
GGPS1-201ENST00000282841 A0A0A0MQY5 61 aa6.54□□□□□ -1.36
GGPS1-201ENST00000282841 MP68P56378 58 aa6.54□□□□□ -1.36
GGPS1-201ENST00000282841 KIAA1109Q2LD37 5005 aa6.52□□□□□ -1.37
GGPS1-201ENST00000282841 LINC00483Q53H64 154 aa6.52□□□□□ -1.37
GGPS1-201ENST00000282841 IGLV8-61A0A075B6I0 122 aa6.51□□□□□ -1.37
GGPS1-201ENST00000282841 CXCL6P80162 114 aa6.51□□□□□ -1.37
GGPS1-201ENST00000282841 RPL37AP61513 92 aaKnown RBP6.51□□□□□ -1.37
GGPS1-201ENST00000282841 FLG2Q5D862 2391 aaPredicted RBP6.5□□□□□ -1.37
GGPS1-201ENST00000282841 HSPG2P98160 4391 aa6.49□□□□□ -1.37
GGPS1-201ENST00000282841 OCR1Q9BZK8 76 aa6.49□□□□□ -1.37
GGPS1-201ENST00000282841 KRTAP13-2Q52LG2 175 aa6.48□□□□□ -1.37
GGPS1-201ENST00000282841 PLA2G1BP04054 148 aaKnown RBP6.47□□□□□ -1.37
GGPS1-201ENST00000282841 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
GGPS1-201ENST00000282841 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.37
GGPS1-201ENST00000282841 KRTAP1-4P0C5Y4 121 aa6.46□□□□□ -1.38
GGPS1-201ENST00000282841 ADM2Q7Z4H4 148 aa6.46□□□□□ -1.38
GGPS1-201ENST00000282841 LIMD2Q9BT23 127 aa6.46□□□□□ -1.38
GGPS1-201ENST00000282841 K7EQZ3 153 aa6.46□□□□□ -1.38
GGPS1-201ENST00000282841 DSCR10P59022 87 aa6.45□□□□□ -1.38
GGPS1-201ENST00000282841 Q8N9P0 234 aaPredicted RBP6.45□□□□□ -1.38
GGPS1-201ENST00000282841 KRTAP17-1Q9BYP8 105 aa6.45□□□□□ -1.38
GGPS1-201ENST00000282841 CYP4F30PQ9H0H9 118 aa6.44□□□□□ -1.38
GGPS1-201ENST00000282841 IGKV4-1P06312 121 aa6.44□□□□□ -1.38
GGPS1-201ENST00000282841 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
GGPS1-201ENST00000282841 Q75L30 129 aa6.43□□□□□ -1.38
GGPS1-201ENST00000282841 RYR1P21817 5038 aa6.42□□□□□ -1.38
GGPS1-201ENST00000282841 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
GGPS1-201ENST00000282841 KRTAP10-4P60372 401 aaPredicted RBP6.41□□□□□ -1.38
GGPS1-201ENST00000282841 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
GGPS1-201ENST00000282841 LINC00472Q9H8W2 130 aa6.4□□□□□ -1.38
GGPS1-201ENST00000282841 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
GGPS1-201ENST00000282841 Q96NJ1 140 aa6.38□□□□□ -1.39
GGPS1-201ENST00000282841 PKHD1L1Q86WI1 4243 aa6.38□□□□□ -1.39
GGPS1-201ENST00000282841 A0A1B0GW54 56 aa6.37□□□□□ -1.39
GGPS1-201ENST00000282841 TYMSOSQ8TAI1 123 aa6.37□□□□□ -1.39
GGPS1-201ENST00000282841 CASC2Q6XLA1 102 aa6.36□□□□□ -1.39
GGPS1-201ENST00000282841 DMBT1Q9UGM3 2413 aaPredicted RBP6.35□□□□□ -1.39
GGPS1-201ENST00000282841 Q5VSD8 79 aa6.35□□□□□ -1.39
GGPS1-201ENST00000282841 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
GGPS1-201ENST00000282841 SSBP3-AS1Q7Z2R9 100 aa6.35□□□□□ -1.39
GGPS1-201ENST00000282841 LINC00208Q96KT6 92 aa6.35□□□□□ -1.39
GGPS1-201ENST00000282841 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
GGPS1-201ENST00000282841 IGHV6-1A0A0B4J1U7 121 aa6.33□□□□□ -1.4
GGPS1-201ENST00000282841 ZCCHC13Q8WW36 166 aaKnown RBP6.33□□□□□ -1.4
GGPS1-201ENST00000282841 FAM229AH3BQW9 127 aa6.32□□□□□ -1.4
GGPS1-201ENST00000282841 A8MWP4 228 aa6.31□□□□□ -1.4
GGPS1-201ENST00000282841 SPINK7P58062 85 aa6.3□□□□□ -1.4
GGPS1-201ENST00000282841 NDUFB1O75438 58 aa6.27□□□□□ -1.41
GGPS1-201ENST00000282841 CDK2AP2O75956 126 aa6.27□□□□□ -1.41
GGPS1-201ENST00000282841 LINC00304Q8N9R0 145 aa6.27□□□□□ -1.41
GGPS1-201ENST00000282841 TNXBP22105 4242 aa6.26□□□□□ -1.41
GGPS1-201ENST00000282841 MMP24-AS1A0A0U1RRL7 71 aa6.25□□□□□ -1.41
GGPS1-201ENST00000282841 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
GGPS1-201ENST00000282841 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
GGPS1-201ENST00000282841 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
GGPS1-201ENST00000282841 SPAG11AQ6PDA7 123 aa6.24□□□□□ -1.41
GGPS1-201ENST00000282841 KRTAP29-1A8MX34 341 aaPredicted RBP6.23□□□□□ -1.41
GGPS1-201ENST00000282841 C8orf17Q9NRJ1 99 aa6.23□□□□□ -1.41
GGPS1-201ENST00000282841 FAT3Q8TDW7 4589 aa6.23□□□□□ -1.41
GGPS1-201ENST00000282841 Q8N1X5 172 aa6.22□□□□□ -1.41
GGPS1-201ENST00000282841 SPINK1P00995 79 aa6.21□□□□□ -1.42
GGPS1-201ENST00000282841 COA5Q86WW8 74 aa6.2□□□□□ -1.42
GGPS1-201ENST00000282841 ABCA13Q86UQ4 5058 aa6.2□□□□□ -1.42
GGPS1-201ENST00000282841 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
GGPS1-201ENST00000282841 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
GGPS1-201ENST00000282841 ASB16-AS1Q495Z4 193 aa6.15□□□□□ -1.42
GGPS1-201ENST00000282841 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
GGPS1-201ENST00000282841 ROMO1P60602 79 aa6.14□□□□□ -1.43
GGPS1-201ENST00000282841 MRPL34Q9BQ48 92 aaKnown RBP6.14□□□□□ -1.43
GGPS1-201ENST00000282841 KRTAP10-8P60410 259 aa6.13□□□□□ -1.43
GGPS1-201ENST00000282841 HERC2O95714 4834 aa6.11□□□□□ -1.43
GGPS1-201ENST00000282841 H0Y9P7 68 aa6.11□□□□□ -1.43
GGPS1-201ENST00000282841 Q5W150 140 aa6.11□□□□□ -1.43
GGPS1-201ENST00000282841 BIRC6Q9NR09 4857 aa6.09□□□□□ -1.43
GGPS1-201ENST00000282841 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
GGPS1-201ENST00000282841 KRTAP16-1A8MUX0 517 aa6.07□□□□□ -1.44
GGPS1-201ENST00000282841 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
GGPS1-201ENST00000282841 PCOTHQ58A44 107 aa6.05□□□□□ -1.44
GGPS1-201ENST00000282841 LPAP08519 4548 aa6.04□□□□□ -1.44
GGPS1-201ENST00000282841 RPS29P62273 56 aaKnown RBP6.04□□□□□ -1.44
GGPS1-201ENST00000282841 PCLOQ9Y6V0 5065 aa6.02□□□□□ -1.45
GGPS1-201ENST00000282841 TP53AIP1Q9HCN2 124 aa6.01□□□□□ -1.45
GGPS1-201ENST00000282841 P0C880 135 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms