RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 UQCR11O14957 56 aa4.51□□□□□ -1.69
EPHA4-201ENST00000281821 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
EPHA4-201ENST00000281821 KRTAP11-1Q8IUC1 163 aa4.51□□□□□ -1.69
EPHA4-201ENST00000281821 Q1T7F1 81 aa4.51□□□□□ -1.69
EPHA4-201ENST00000281821 OCR1Q9BZK8 76 aa4.51□□□□□ -1.69
EPHA4-201ENST00000281821 MMP24-AS1A0A0U1RRL7 71 aa4.5□□□□□ -1.69
EPHA4-201ENST00000281821 KRTAP1-4P0C5Y4 121 aa4.5□□□□□ -1.69
EPHA4-201ENST00000281821 TGP01266 2768 aa4.5□□□□□ -1.69
EPHA4-201ENST00000281821 SPANXA2-OT1Q8N9U9 137 aa4.5□□□□□ -1.69
EPHA4-201ENST00000281821 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
EPHA4-201ENST00000281821 CDC42SE1Q9NRR8 79 aa4.49□□□□□ -1.69
EPHA4-201ENST00000281821 A0A0G2JQZ4 141 aa4.49□□□□□ -1.69
EPHA4-201ENST00000281821 SPINT4Q6UDR6 99 aa4.48□□□□□ -1.69
EPHA4-201ENST00000281821 Q75L30 129 aa4.46□□□□□ -1.69
EPHA4-201ENST00000281821 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.7
EPHA4-201ENST00000281821 TPRXLQ17RH7 258 aa4.45□□□□□ -1.7
EPHA4-201ENST00000281821 KRTAP10-8P60410 259 aa4.45□□□□□ -1.7
EPHA4-201ENST00000281821 RELNP78509 3460 aa4.43□□□□□ -1.7
EPHA4-201ENST00000281821 RPL37P61927 97 aaKnown RBP4.41□□□□□ -1.7
EPHA4-201ENST00000281821 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
EPHA4-201ENST00000281821 MEGF8Q7Z7M0 2845 aa4.4□□□□□ -1.71
EPHA4-201ENST00000281821 SPINK7P58062 85 aa4.39□□□□□ -1.71
EPHA4-201ENST00000281821 A8MUU9 505 aa4.38□□□□□ -1.71
EPHA4-201ENST00000281821 CSAG1Q6PB30 78 aa4.38□□□□□ -1.71
EPHA4-201ENST00000281821 C20orf166-AS1Q96NR2 134 aa4.37□□□□□ -1.71
EPHA4-201ENST00000281821 WDFY3Q8IZQ1 3526 aa4.37□□□□□ -1.71
EPHA4-201ENST00000281821 Q5VV11 94 aa4.37□□□□□ -1.71
EPHA4-201ENST00000281821 Q5W150 140 aa4.35□□□□□ -1.71
EPHA4-201ENST00000281821 LINC01558Q9Y6Z2 57 aa4.35□□□□□ -1.71
EPHA4-201ENST00000281821 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
EPHA4-201ENST00000281821 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
EPHA4-201ENST00000281821 LAMA5O15230 3695 aa4.34□□□□□ -1.71
EPHA4-201ENST00000281821 DMDP11532 3685 aa4.33□□□□□ -1.72
EPHA4-201ENST00000281821 PRAC1Q96KF2 57 aa4.33□□□□□ -1.72
EPHA4-201ENST00000281821 H3BS24 57 aa4.33□□□□□ -1.72
EPHA4-201ENST00000281821 M0R2T5 61 aa4.32□□□□□ -1.72
EPHA4-201ENST00000281821 ZFHX4Q86UP3 3567 aa4.31□□□□□ -1.72
EPHA4-201ENST00000281821 HRES1P13985 223 aa4.31□□□□□ -1.72
EPHA4-201ENST00000281821 SMG1Q96Q15 3661 aaKnown RBP4.3□□□□□ -1.72
EPHA4-201ENST00000281821 ZFHX3Q15911 3703 aa4.3□□□□□ -1.72
EPHA4-201ENST00000281821 XP32Q5T750 250 aa4.29□□□□□ -1.72
EPHA4-201ENST00000281821 KRTAP13-3Q3SY46 172 aa4.29□□□□□ -1.72
EPHA4-201ENST00000281821 NBPF19A0A087WUL8 3843 aa4.28□□□□□ -1.72
EPHA4-201ENST00000281821 S4R3F8 94 aa4.27□□□□□ -1.73
EPHA4-201ENST00000281821 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
EPHA4-201ENST00000281821 NOTCH2NLQ7Z3S9 236 aa4.26□□□□□ -1.73
EPHA4-201ENST00000281821 A0A0D9SG42 100 aa4.25□□□□□ -1.73
EPHA4-201ENST00000281821 DMAC1Q96GE9 116 aa4.25□□□□□ -1.73
EPHA4-201ENST00000281821 KRTAP10-4P60372 401 aaPredicted RBP4.24□□□□□ -1.73
EPHA4-201ENST00000281821 A0A1B0GU33 70 aa4.23□□□□□ -1.73
EPHA4-201ENST00000281821 DNHD1Q96M86 4753 aa4.22□□□□□ -1.73
EPHA4-201ENST00000281821 BSNQ9UPA5 3926 aa4.22□□□□□ -1.73
EPHA4-201ENST00000281821 ALMS1Q8TCU4 4167 aa4.2□□□□□ -1.74
EPHA4-201ENST00000281821 MT1HL1P0DM35 61 aa4.19□□□□□ -1.74
EPHA4-201ENST00000281821 ASPMQ8IZT6 3477 aa4.19□□□□□ -1.74
EPHA4-201ENST00000281821 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
EPHA4-201ENST00000281821 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
EPHA4-201ENST00000281821 A6NN06 94 aa4.15□□□□□ -1.75
EPHA4-201ENST00000281821 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.75
EPHA4-201ENST00000281821 DNAH11Q96DT5 4516 aa4.13□□□□□ -1.75
EPHA4-201ENST00000281821 R4GN34 69 aa4.11□□□□□ -1.75
EPHA4-201ENST00000281821 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
EPHA4-201ENST00000281821 TRRAPQ9Y4A5 3859 aa4.1□□□□□ -1.75
EPHA4-201ENST00000281821 SPENQ96T58 3664 aaKnown RBP4.1□□□□□ -1.75
EPHA4-201ENST00000281821 A8MU10 97 aa4.1□□□□□ -1.75
EPHA4-201ENST00000281821 AKAP9Q99996 3911 aa4.09□□□□□ -1.75
EPHA4-201ENST00000281821 SPATA8Q6RVD6 105 aa4.09□□□□□ -1.75
EPHA4-201ENST00000281821 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.76
EPHA4-201ENST00000281821 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
EPHA4-201ENST00000281821 M0QZ58 72 aa4.08□□□□□ -1.76
EPHA4-201ENST00000281821 PLECQ15149 4684 aaKnown RBP4.08□□□□□ -1.76
EPHA4-201ENST00000281821 ROMO1P60602 79 aa4.07□□□□□ -1.76
EPHA4-201ENST00000281821 KRTAP3-3Q9BYR6 98 aa4.07□□□□□ -1.76
EPHA4-201ENST00000281821 KRTAP3-2Q9BYR7 98 aa4.07□□□□□ -1.76
EPHA4-201ENST00000281821 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
EPHA4-201ENST00000281821 COL7A1Q02388 2944 aa4.04□□□□□ -1.76
EPHA4-201ENST00000281821 A0A0A0MQY5 61 aa4.04□□□□□ -1.76
EPHA4-201ENST00000281821 CSMD2Q7Z408 3487 aa4.03□□□□□ -1.76
EPHA4-201ENST00000281821 CAMK2N1Q7Z7J9 78 aa4.03□□□□□ -1.76
EPHA4-201ENST00000281821 ANK2Q01484 3957 aa4.03□□□□□ -1.76
EPHA4-201ENST00000281821 SRRM2Q9UQ35 2752 aaKnown RBP4.03□□□□□ -1.76
EPHA4-201ENST00000281821 KRTAP25-1Q3LHN0 102 aa4.01□□□□□ -1.77
EPHA4-201ENST00000281821 PLAC4Q8WY50 150 aa4.01□□□□□ -1.77
EPHA4-201ENST00000281821 KRTAP4-5Q9BYR2 181 aa4□□□□□ -1.77
EPHA4-201ENST00000281821 CUBNO60494 3623 aa3.99□□□□□ -1.77
EPHA4-201ENST00000281821 BIRC6Q9NR09 4857 aa3.98□□□□□ -1.77
EPHA4-201ENST00000281821 DNAH1Q9P2D7 4330 aa3.97□□□□□ -1.77
EPHA4-201ENST00000281821 SVEP1Q4LDE5 3571 aa3.97□□□□□ -1.77
EPHA4-201ENST00000281821 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.78
EPHA4-201ENST00000281821 H0YAA0 97 aa3.96□□□□□ -1.78
EPHA4-201ENST00000281821 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
EPHA4-201ENST00000281821 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
EPHA4-201ENST00000281821 LCE2DQ5TA82 110 aaPredicted RBP3.92□□□□□ -1.78
EPHA4-201ENST00000281821 RYR2Q92736 4967 aa3.92□□□□□ -1.78
EPHA4-201ENST00000281821 DYNC2H1Q8NCM8 4307 aaKnown RBP3.91□□□□□ -1.78
EPHA4-201ENST00000281821 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
EPHA4-201ENST00000281821 RYR1P21817 5038 aa3.89□□□□□ -1.79
EPHA4-201ENST00000281821 KIAA1109Q2LD37 5005 aa3.89□□□□□ -1.79
EPHA4-201ENST00000281821 ZNF469Q96JG9 3925 aaPredicted RBP3.89□□□□□ -1.79
EPHA4-201ENST00000281821 DNAH17Q9UFH2 4485 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms