RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 Q8N1X5 172 aa8.76□□□□□ -1.01
CNOT9-201ENST00000273064 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
CNOT9-201ENST00000273064 LINC00304Q8N9R0 145 aa8.74□□□□□ -1.01
CNOT9-201ENST00000273064 SPRR1BP22528 89 aa8.73□□□□□ -1.01
CNOT9-201ENST00000273064 Q6ZRN7 208 aaPredicted RBP8.73□□□□□ -1.01
CNOT9-201ENST00000273064 C8orf87E5RJ46 101 aa8.7□□□□□ -1.02
CNOT9-201ENST00000273064 CD164Q04900 197 aa8.7□□□□□ -1.02
CNOT9-201ENST00000273064 ATP11AUNQ6ZP68 121 aa8.66□□□□□ -1.02
CNOT9-201ENST00000273064 Q6ZR54 194 aa8.66□□□□□ -1.02
CNOT9-201ENST00000273064 MEGF8Q7Z7M0 2845 aa8.65□□□□□ -1.02
CNOT9-201ENST00000273064 AKAP9Q99996 3911 aa8.65□□□□□ -1.02
CNOT9-201ENST00000273064 HRES1P13985 223 aa8.63□□□□□ -1.03
CNOT9-201ENST00000273064 KRTAP29-1A8MX34 341 aaPredicted RBP8.62□□□□□ -1.03
CNOT9-201ENST00000273064 SPANXA2-OT1Q8N9U9 137 aa8.61□□□□□ -1.03
CNOT9-201ENST00000273064 IGLV7-46A0A075B6I9 117 aa8.59□□□□□ -1.03
CNOT9-201ENST00000273064 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
CNOT9-201ENST00000273064 Q5W150 140 aa8.58□□□□□ -1.04
CNOT9-201ENST00000273064 K7ERS5 55 aa8.54□□□□□ -1.04
CNOT9-201ENST00000273064 Q1T7F1 81 aa8.53□□□□□ -1.04
CNOT9-201ENST00000273064 ZCCHC13Q8WW36 166 aaKnown RBP8.53□□□□□ -1.04
CNOT9-201ENST00000273064 KRTAP13-1Q8IUC0 172 aa8.52□□□□□ -1.05
CNOT9-201ENST00000273064 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
CNOT9-201ENST00000273064 A8MU10 97 aa8.49□□□□□ -1.05
CNOT9-201ENST00000273064 Q5VV11 94 aa8.48□□□□□ -1.05
CNOT9-201ENST00000273064 RBM12B-AS1Q9P1G2 102 aa8.46□□□□□ -1.05
CNOT9-201ENST00000273064 UQCR11O14957 56 aa8.46□□□□□ -1.06
CNOT9-201ENST00000273064 SPINK7P58062 85 aa8.46□□□□□ -1.06
CNOT9-201ENST00000273064 KTN1-AS1Q86SY8 53 aa8.45□□□□□ -1.06
CNOT9-201ENST00000273064 KRTAP13-2Q52LG2 175 aa8.44□□□□□ -1.06
CNOT9-201ENST00000273064 MIR22HGQ0VDD5 57 aa8.44□□□□□ -1.06
CNOT9-201ENST00000273064 H3BS24 57 aa8.43□□□□□ -1.06
CNOT9-201ENST00000273064 A0A0D9SG42 100 aa8.38□□□□□ -1.07
CNOT9-201ENST00000273064 LCE6AA0A183 80 aa8.35□□□□□ -1.07
CNOT9-201ENST00000273064 CDC42SE1Q9NRR8 79 aa8.35□□□□□ -1.07
CNOT9-201ENST00000273064 LINC01558Q9Y6Z2 57 aa8.33□□□□□ -1.08
CNOT9-201ENST00000273064 Q75L30 129 aa8.31□□□□□ -1.08
CNOT9-201ENST00000273064 PRAC1Q96KF2 57 aa8.31□□□□□ -1.08
CNOT9-201ENST00000273064 LCA10Q71F78 164 aa8.28□□□□□ -1.08
CNOT9-201ENST00000273064 J3QL48 77 aa8.26□□□□□ -1.09
CNOT9-201ENST00000273064 LINC01554Q52M75 96 aa8.25□□□□□ -1.09
CNOT9-201ENST00000273064 Q5VSD8 79 aa8.24□□□□□ -1.09
CNOT9-201ENST00000273064 CRIPTQ9P021 101 aa8.23□□□□□ -1.09
CNOT9-201ENST00000273064 DMAC1Q96GE9 116 aa8.22□□□□□ -1.09
CNOT9-201ENST00000273064 A0A1B0GU33 70 aa8.17□□□□□ -1.1
CNOT9-201ENST00000273064 HUWE1Q7Z6Z7 4374 aaKnown RBP8.15□□□□□ -1.1
CNOT9-201ENST00000273064 KRTAP1-4P0C5Y4 121 aa8.15□□□□□ -1.1
CNOT9-201ENST00000273064 SPINT4Q6UDR6 99 aa8.15□□□□□ -1.1
CNOT9-201ENST00000273064 COX6B2Q6YFQ2 88 aa8.11□□□□□ -1.11
CNOT9-201ENST00000273064 SPATA8Q6RVD6 105 aa8.11□□□□□ -1.11
CNOT9-201ENST00000273064 Q6ZSA8 131 aa8.1□□□□□ -1.11
CNOT9-201ENST00000273064 DNAH10Q8IVF4 4471 aa8.08□□□□□ -1.12
CNOT9-201ENST00000273064 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
CNOT9-201ENST00000273064 ADM2Q7Z4H4 148 aa8.04□□□□□ -1.12
CNOT9-201ENST00000273064 DNHD1Q96M86 4753 aa8.03□□□□□ -1.12
CNOT9-201ENST00000273064 ANK2Q01484 3957 aa8□□□□□ -1.13
CNOT9-201ENST00000273064 CSAG1Q6PB30 78 aa8□□□□□ -1.13
CNOT9-201ENST00000273064 PLECQ15149 4684 aaKnown RBP7.95□□□□□ -1.14
CNOT9-201ENST00000273064 S4R3F8 94 aa7.94□□□□□ -1.14
CNOT9-201ENST00000273064 DNAH9Q9NYC9 4486 aa7.9□□□□□ -1.14
CNOT9-201ENST00000273064 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
CNOT9-201ENST00000273064 A6NN06 94 aa7.88□□□□□ -1.15
CNOT9-201ENST00000273064 H1FX-AS1Q4G0G2 97 aa7.86□□□□□ -1.15
CNOT9-201ENST00000273064 LYSTQ99698 3801 aa7.84□□□□□ -1.15
CNOT9-201ENST00000273064 DNAH11Q96DT5 4516 aa7.83□□□□□ -1.16
CNOT9-201ENST00000273064 A8MUU9 505 aa7.81□□□□□ -1.16
CNOT9-201ENST00000273064 KRTAP13-3Q3SY46 172 aa7.8□□□□□ -1.16
CNOT9-201ENST00000273064 PRKDCP78527 4128 aaKnown RBP7.78□□□□□ -1.16
CNOT9-201ENST00000273064 RPS29P62273 56 aaKnown RBP7.78□□□□□ -1.16
CNOT9-201ENST00000273064 C20orf166-AS1Q96NR2 134 aa7.78□□□□□ -1.16
CNOT9-201ENST00000273064 STARD9Q9P2P6 4700 aa7.76□□□□□ -1.17
CNOT9-201ENST00000273064 RPL37P61927 97 aaKnown RBP7.76□□□□□ -1.17
CNOT9-201ENST00000273064 R4GN34 69 aa7.76□□□□□ -1.17
CNOT9-201ENST00000273064 KRTAP21-3Q3LHN1 58 aa7.73□□□□□ -1.17
CNOT9-201ENST00000273064 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
CNOT9-201ENST00000273064 M0QZ58 72 aa7.71□□□□□ -1.18
CNOT9-201ENST00000273064 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
CNOT9-201ENST00000273064 M0R2T5 61 aa7.69□□□□□ -1.18
CNOT9-201ENST00000273064 XP32Q5T750 250 aa7.69□□□□□ -1.18
CNOT9-201ENST00000273064 KMT2AQ03164 3969 aa7.69□□□□□ -1.18
CNOT9-201ENST00000273064 FAT1Q14517 4588 aa7.65□□□□□ -1.18
CNOT9-201ENST00000273064 A0A1B0GVY2 172 aa7.65□□□□□ -1.18
CNOT9-201ENST00000273064 SEC61BP60468 96 aaKnown RBP7.65□□□□□ -1.18
CNOT9-201ENST00000273064 H0YAA0 97 aa7.63□□□□□ -1.19
CNOT9-201ENST00000273064 DNAH5Q8TE73 4624 aa7.61□□□□□ -1.19
CNOT9-201ENST00000273064 DNAH8Q96JB1 4490 aa7.6□□□□□ -1.19
CNOT9-201ENST00000273064 ROMO1P60602 79 aa7.6□□□□□ -1.19
CNOT9-201ENST00000273064 LRP1BQ9NZR2 4599 aa7.56□□□□□ -1.2
CNOT9-201ENST00000273064 P0C880 135 aa7.54□□□□□ -1.2
CNOT9-201ENST00000273064 DNAH7Q8WXX0 4024 aa7.54□□□□□ -1.2
CNOT9-201ENST00000273064 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
CNOT9-201ENST00000273064 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
CNOT9-201ENST00000273064 C10orf95Q9H7T3 257 aa7.5□□□□□ -1.21
CNOT9-201ENST00000273064 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
CNOT9-201ENST00000273064 VPS13DQ5THJ4 4388 aa7.47□□□□□ -1.21
CNOT9-201ENST00000273064 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
CNOT9-201ENST00000273064 FRAS1Q86XX4 4008 aa7.44□□□□□ -1.22
CNOT9-201ENST00000273064 A0A0A0MQY5 61 aa7.41□□□□□ -1.22
CNOT9-201ENST00000273064 CMYA5Q8N3K9 4069 aa7.41□□□□□ -1.22
CNOT9-201ENST00000273064 DNAH17Q9UFH2 4485 aa7.38□□□□□ -1.23
CNOT9-201ENST00000273064 DNAH6Q9C0G6 4158 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms