RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 KRTAP13-1Q8IUC0 172 aa5.34□□□□□ -1.55
TRIM43-201ENST00000272395 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.34□□□□□ -1.55
TRIM43-201ENST00000272395 RYR1P21817 5038 aa5.34□□□□□ -1.55
TRIM43-201ENST00000272395 A0A0G2JQZ4 141 aa5.34□□□□□ -1.56
TRIM43-201ENST00000272395 A8MWP4 228 aa5.34□□□□□ -1.56
TRIM43-201ENST00000272395 KRTAP29-1A8MX34 341 aaPredicted RBP5.34□□□□□ -1.56
TRIM43-201ENST00000272395 H3BPC8 53 aa5.34□□□□□ -1.56
TRIM43-201ENST00000272395 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.56
TRIM43-201ENST00000272395 MP68P56378 58 aa5.33□□□□□ -1.56
TRIM43-201ENST00000272395 RPL37AP61513 92 aaKnown RBP5.33□□□□□ -1.56
TRIM43-201ENST00000272395 Q6ZSA8 131 aa5.33□□□□□ -1.56
TRIM43-201ENST00000272395 PRR15Q8IV56 129 aa5.33□□□□□ -1.56
TRIM43-201ENST00000272395 LINC00472Q9H8W2 130 aa5.33□□□□□ -1.56
TRIM43-201ENST00000272395 HSPG2P98160 4391 aa5.32□□□□□ -1.56
TRIM43-201ENST00000272395 CDK2AP2O75956 126 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 CASC2Q6XLA1 102 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 SPACA4Q8TDM5 124 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 CYP4F30PQ9H0H9 118 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 DNAH8Q96JB1 4490 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 HERC2O95714 4834 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 DEFB116Q30KQ4 102 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 WFDC13Q8IUB5 93 aa5.31□□□□□ -1.56
TRIM43-201ENST00000272395 hDV103S1A0JD37 113 aa5.3□□□□□ -1.56
TRIM43-201ENST00000272395 CIRBP-AS1Q8TBR5 109 aa5.3□□□□□ -1.56
TRIM43-201ENST00000272395 ZNF706Q9Y5V0 76 aaPredicted RBP5.3□□□□□ -1.56
TRIM43-201ENST00000272395 SMR3BP02814 79 aaPredicted RBP5.29□□□□□ -1.56
TRIM43-201ENST00000272395 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
TRIM43-201ENST00000272395 TRAV22A0A0B4J277 110 aa5.27□□□□□ -1.57
TRIM43-201ENST00000272395 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
TRIM43-201ENST00000272395 SPANXA2-OT1Q8N9U9 137 aa5.27□□□□□ -1.57
TRIM43-201ENST00000272395 C1orf64Q8NEQ6 169 aa5.27□□□□□ -1.57
TRIM43-201ENST00000272395 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
TRIM43-201ENST00000272395 H0Y9P7 68 aa5.26□□□□□ -1.57
TRIM43-201ENST00000272395 SRRM2Q9UQ35 2752 aaKnown RBP5.26□□□□□ -1.57
TRIM43-201ENST00000272395 LINC00208Q96KT6 92 aa5.25□□□□□ -1.57
TRIM43-201ENST00000272395 PLAC8Q9NZF1 115 aa5.25□□□□□ -1.57
TRIM43-201ENST00000272395 MMP24-AS1A0A0U1RRL7 71 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 MOBPQ13875 183 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 TP53AIP1Q9HCN2 124 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 FAT1Q14517 4588 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 Q1T7F1 81 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 ASB16-AS1Q495Z4 193 aa5.24□□□□□ -1.57
TRIM43-201ENST00000272395 Q8N1X5 172 aa5.23□□□□□ -1.57
TRIM43-201ENST00000272395 MPLKIPQ8TAP9 179 aa5.23□□□□□ -1.57
TRIM43-201ENST00000272395 Q96NJ1 140 aa5.23□□□□□ -1.57
TRIM43-201ENST00000272395 IGLV9-49A0A0B4J1Y8 123 aa5.22□□□□□ -1.57
TRIM43-201ENST00000272395 Q5VSD8 79 aa5.22□□□□□ -1.57
TRIM43-201ENST00000272395 PSORS1C2Q9UIG4 136 aa5.21□□□□□ -1.57
TRIM43-201ENST00000272395 V9GYY9 64 aa5.21□□□□□ -1.57
TRIM43-201ENST00000272395 ZNF861PO60384 105 aa5.21□□□□□ -1.58
TRIM43-201ENST00000272395 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
TRIM43-201ENST00000272395 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
TRIM43-201ENST00000272395 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
TRIM43-201ENST00000272395 KRTAP19-1Q8IUB9 90 aa5.19□□□□□ -1.58
TRIM43-201ENST00000272395 C8orf17Q9NRJ1 99 aa5.19□□□□□ -1.58
TRIM43-201ENST00000272395 KRTAP10-4P60372 401 aaPredicted RBP5.18□□□□□ -1.58
TRIM43-201ENST00000272395 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
TRIM43-201ENST00000272395 PLA2G1BP04054 148 aaKnown RBP5.17□□□□□ -1.58
TRIM43-201ENST00000272395 PRR4Q16378 134 aa5.17□□□□□ -1.58
TRIM43-201ENST00000272395 CD164Q04900 197 aa5.16□□□□□ -1.58
TRIM43-201ENST00000272395 C1orf195Q5TG92 126 aa5.16□□□□□ -1.58
TRIM43-201ENST00000272395 BRK1Q8WUW1 75 aa5.16□□□□□ -1.58
TRIM43-201ENST00000272395 IGLV7-46A0A075B6I9 117 aa5.15□□□□□ -1.58
TRIM43-201ENST00000272395 IGLV7-43P04211 117 aa5.15□□□□□ -1.59
TRIM43-201ENST00000272395 MRPL34Q9BQ48 92 aaKnown RBP5.15□□□□□ -1.59
TRIM43-201ENST00000272395 IGHV6-1A0A0B4J1U7 121 aa5.14□□□□□ -1.59
TRIM43-201ENST00000272395 SSBP3-AS1Q7Z2R9 100 aa5.12□□□□□ -1.59
TRIM43-201ENST00000272395 LIMD2Q9BT23 127 aa5.12□□□□□ -1.59
TRIM43-201ENST00000272395 NDUFS5O43920 106 aa5.11□□□□□ -1.59
TRIM43-201ENST00000272395 PKHD1L1Q86WI1 4243 aa5.1□□□□□ -1.59
TRIM43-201ENST00000272395 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
TRIM43-201ENST00000272395 ANAPC11Q9NYG5 84 aa5.1□□□□□ -1.59
TRIM43-201ENST00000272395 LOC101927531A0A1B0GV80 90 aa5.09□□□□□ -1.59
TRIM43-201ENST00000272395 COA5Q86WW8 74 aa5.09□□□□□ -1.59
TRIM43-201ENST00000272395 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
TRIM43-201ENST00000272395 PSPHP1O15172 72 aa5.08□□□□□ -1.6
TRIM43-201ENST00000272395 PCOTHQ58A44 107 aa5.08□□□□□ -1.6
TRIM43-201ENST00000272395 MYCBP2O75592 4640 aa5.07□□□□□ -1.6
TRIM43-201ENST00000272395 A8MUN3 132 aa5.07□□□□□ -1.6
TRIM43-201ENST00000272395 A0A087X002 238 aa5.06□□□□□ -1.6
TRIM43-201ENST00000272395 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
TRIM43-201ENST00000272395 Q5VV11 94 aa5.05□□□□□ -1.6
TRIM43-201ENST00000272395 SPINK6Q6UWN8 80 aa5.05□□□□□ -1.6
TRIM43-201ENST00000272395 KRTAP13-3Q3SY46 172 aa5.05□□□□□ -1.6
TRIM43-201ENST00000272395 FLG2Q5D862 2391 aaPredicted RBP5.05□□□□□ -1.6
TRIM43-201ENST00000272395 Q75L30 129 aa5.03□□□□□ -1.6
TRIM43-201ENST00000272395 LRP1Q07954 4544 aaKnown RBP5.03□□□□□ -1.6
TRIM43-201ENST00000272395 PRR15LQ9BU68 103 aa5.02□□□□□ -1.61
TRIM43-201ENST00000272395 LINC01558Q9Y6Z2 57 aa5.02□□□□□ -1.61
TRIM43-201ENST00000272395 FAT3Q8TDW7 4589 aa5.01□□□□□ -1.61
TRIM43-201ENST00000272395 CHKB-CPT1BH3BT56 60 aa5.01□□□□□ -1.61
TRIM43-201ENST00000272395 HRES1P13985 223 aa5.01□□□□□ -1.61
TRIM43-201ENST00000272395 LINC00313P59037 77 aa5.01□□□□□ -1.61
TRIM43-201ENST00000272395 Q5W150 140 aa5.01□□□□□ -1.61
TRIM43-201ENST00000272395 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
TRIM43-201ENST00000272395 KRTAP1-4P0C5Y4 121 aa4.99□□□□□ -1.61
TRIM43-201ENST00000272395 KRTAP13-2Q52LG2 175 aa4.99□□□□□ -1.61
TRIM43-201ENST00000272395 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
TRIM43-201ENST00000272395 ACYP2P14621 99 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms