RNA–Protein interactions for RNA: ENST00000272133.3

CNIH3-201, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNIH3, Length 2,558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-201ENST00000272133 CDK2AP2O75956 126 aa11.16□□□□□ -0.62
CNIH3-201ENST00000272133 PLAC8Q9NZF1 115 aa11.16□□□□□ -0.62
CNIH3-201ENST00000272133 DNHD1Q96M86 4753 aa11.13□□□□□ -0.63
CNIH3-201ENST00000272133 CDC42SE1Q9NRR8 79 aa11.13□□□□□ -0.63
CNIH3-201ENST00000272133 DNAH8Q96JB1 4490 aa11.13□□□□□ -0.63
CNIH3-201ENST00000272133 KTN1-AS1Q86SY8 53 aa11.13□□□□□ -0.63
CNIH3-201ENST00000272133 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
CNIH3-201ENST00000272133 STARD9Q9P2P6 4700 aa11.09□□□□□ -0.63
CNIH3-201ENST00000272133 ZNF706Q9Y5V0 76 aaPredicted RBP11.09□□□□□ -0.63
CNIH3-201ENST00000272133 A6NN06 94 aa11.08□□□□□ -0.64
CNIH3-201ENST00000272133 SPINK7P58062 85 aa11.08□□□□□ -0.64
CNIH3-201ENST00000272133 HECTD4Q9Y4D8 3996 aa11.07□□□□□ -0.64
CNIH3-201ENST00000272133 SPINK6Q6UWN8 80 aa11.07□□□□□ -0.64
CNIH3-201ENST00000272133 IGLV5-52A0A0A0MRZ9 124 aa11.06□□□□□ -0.64
CNIH3-201ENST00000272133 Q5W150 140 aa11.06□□□□□ -0.64
CNIH3-201ENST00000272133 MEGF8Q7Z7M0 2845 aa11.05□□□□□ -0.64
CNIH3-201ENST00000272133 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
CNIH3-201ENST00000272133 ZNF861PO60384 105 aa11.02□□□□□ -0.65
CNIH3-201ENST00000272133 A0A087WTM6 91 aa11.01□□□□□ -0.65
CNIH3-201ENST00000272133 KRTAP13-3Q3SY46 172 aa11□□□□□ -0.65
CNIH3-201ENST00000272133 VPS13DQ5THJ4 4388 aa10.99□□□□□ -0.65
CNIH3-201ENST00000272133 RTL8CO15255 209 aa10.98□□□□□ -0.65
CNIH3-201ENST00000272133 RBM12B-AS1Q9P1G2 102 aa10.97□□□□□ -0.65
CNIH3-201ENST00000272133 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.66
CNIH3-201ENST00000272133 NUPR2A6NF83 97 aa10.95□□□□□ -0.66
CNIH3-201ENST00000272133 KMT2AQ03164 3969 aa10.94□□□□□ -0.66
CNIH3-201ENST00000272133 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
CNIH3-201ENST00000272133 DNAH2Q9P225 4427 aa10.93□□□□□ -0.66
CNIH3-201ENST00000272133 C7orf65Q6ZTY9 151 aa10.89□□□□□ -0.67
CNIH3-201ENST00000272133 ACYP2P14621 99 aa10.89□□□□□ -0.67
CNIH3-201ENST00000272133 FBN3Q75N90 2809 aa10.88□□□□□ -0.67
CNIH3-201ENST00000272133 ALMS1Q8TCU4 4167 aa10.88□□□□□ -0.67
CNIH3-201ENST00000272133 IGLV7-43P04211 117 aa10.85□□□□□ -0.67
CNIH3-201ENST00000272133 RETNLBQ9BQ08 111 aa10.84□□□□□ -0.67
CNIH3-201ENST00000272133 DMAC1Q96GE9 116 aa10.83□□□□□ -0.68
CNIH3-201ENST00000272133 TGP01266 2768 aa10.82□□□□□ -0.68
CNIH3-201ENST00000272133 C8orf87E5RJ46 101 aa10.81□□□□□ -0.68
CNIH3-201ENST00000272133 LINC00313P59037 77 aa10.77□□□□□ -0.68
CNIH3-201ENST00000272133 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
CNIH3-201ENST00000272133 FAM229AH3BQW9 127 aa10.75□□□□□ -0.69
CNIH3-201ENST00000272133 SSBP3-AS1Q7Z2R9 100 aa10.74□□□□□ -0.69
CNIH3-201ENST00000272133 DNAH11Q96DT5 4516 aa10.74□□□□□ -0.69
CNIH3-201ENST00000272133 A0A1B0GU69 56 aa10.73□□□□□ -0.69
CNIH3-201ENST00000272133 IGKV2-30P06310 120 aa10.72□□□□□ -0.69
CNIH3-201ENST00000272133 PRAC1Q96KF2 57 aa10.67□□□□□ -0.7
CNIH3-201ENST00000272133 KRTAP13-2Q52LG2 175 aa10.66□□□□□ -0.7
CNIH3-201ENST00000272133 C1orf134Q5TEV5 83 aa10.65□□□□□ -0.7
CNIH3-201ENST00000272133 DNAH5Q8TE73 4624 aa10.65□□□□□ -0.71
CNIH3-201ENST00000272133 KRTAP16-1A8MUX0 517 aa10.64□□□□□ -0.71
CNIH3-201ENST00000272133 KRTAP21-3Q3LHN1 58 aa10.64□□□□□ -0.71
CNIH3-201ENST00000272133 ADM2Q7Z4H4 148 aa10.64□□□□□ -0.71
CNIH3-201ENST00000272133 IGKV2D-30A0A075B6S6 120 aa10.61□□□□□ -0.71
CNIH3-201ENST00000272133 SPATA8Q6RVD6 105 aa10.61□□□□□ -0.71
CNIH3-201ENST00000272133 LY6G6CO95867 125 aa10.6□□□□□ -0.71
CNIH3-201ENST00000272133 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
CNIH3-201ENST00000272133 KRTAP10-2P60368 255 aa10.57□□□□□ -0.72
CNIH3-201ENST00000272133 MIR22HGQ0VDD5 57 aa10.57□□□□□ -0.72
CNIH3-201ENST00000272133 LRP1BQ9NZR2 4599 aa10.57□□□□□ -0.72
CNIH3-201ENST00000272133 UQCR11O14957 56 aa10.55□□□□□ -0.72
CNIH3-201ENST00000272133 PLA2G1BP04054 148 aaKnown RBP10.55□□□□□ -0.72
CNIH3-201ENST00000272133 PKD1P98161 4303 aa10.47□□□□□ -0.73
CNIH3-201ENST00000272133 KRTAP1-4P0C5Y4 121 aa10.46□□□□□ -0.73
CNIH3-201ENST00000272133 FAT2Q9NYQ8 4349 aa10.46□□□□□ -0.73
CNIH3-201ENST00000272133 VPS13BQ7Z7G8 4022 aa10.44□□□□□ -0.74
CNIH3-201ENST00000272133 SPINK1P00995 79 aa10.43□□□□□ -0.74
CNIH3-201ENST00000272133 KRTAP10-1P60331 282 aa10.42□□□□□ -0.74
CNIH3-201ENST00000272133 Q8N1X5 172 aa10.4□□□□□ -0.74
CNIH3-201ENST00000272133 Q6ZSA8 131 aa10.39□□□□□ -0.75
CNIH3-201ENST00000272133 LINC01554Q52M75 96 aa10.36□□□□□ -0.75
CNIH3-201ENST00000272133 C4orf48Q5BLP8 95 aa10.35□□□□□ -0.75
CNIH3-201ENST00000272133 TYMSOSQ8TAI1 123 aa10.33□□□□□ -0.76
CNIH3-201ENST00000272133 SACSQ9NZJ4 4579 aa10.33□□□□□ -0.76
CNIH3-201ENST00000272133 CSAG1Q6PB30 78 aa10.29□□□□□ -0.76
CNIH3-201ENST00000272133 PKHD1P08F94 4074 aa10.21□□□□□ -0.77
CNIH3-201ENST00000272133 H0YAA0 97 aa10.2□□□□□ -0.78
CNIH3-201ENST00000272133 LINC00304Q8N9R0 145 aa10.17□□□□□ -0.78
CNIH3-201ENST00000272133 C9orf92A6NGG3 77 aa10.13□□□□□ -0.79
CNIH3-201ENST00000272133 KRTAP3-1Q9BYR8 98 aa10.11□□□□□ -0.79
CNIH3-201ENST00000272133 A8MUU9 505 aa10.11□□□□□ -0.79
CNIH3-201ENST00000272133 DYNC1H1Q14204 4646 aaKnown RBP10.08□□□□□ -0.8
CNIH3-201ENST00000272133 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
CNIH3-201ENST00000272133 A0A1B0GU33 70 aa10.06□□□□□ -0.8
CNIH3-201ENST00000272133 C20orf166-AS1Q96NR2 134 aa10.04□□□□□ -0.8
CNIH3-201ENST00000272133 RYR2Q92736 4967 aa10.04□□□□□ -0.8
CNIH3-201ENST00000272133 KMT2CQ8NEZ4 4911 aaKnown RBP10.02□□□□□ -0.8
CNIH3-201ENST00000272133 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
CNIH3-201ENST00000272133 SMR3BP02814 79 aaPredicted RBP9.97□□□□□ -0.81
CNIH3-201ENST00000272133 A0A1B0GVY2 172 aa9.96□□□□□ -0.82
CNIH3-201ENST00000272133 APOBP04114 4563 aaKnown RBP9.95□□□□□ -0.82
CNIH3-201ENST00000272133 KRTAP25-1Q3LHN0 102 aa9.94□□□□□ -0.82
CNIH3-201ENST00000272133 FAT1Q14517 4588 aa9.94□□□□□ -0.82
CNIH3-201ENST00000272133 PKHD1L1Q86WI1 4243 aa9.93□□□□□ -0.82
CNIH3-201ENST00000272133 FLG2Q5D862 2391 aaPredicted RBP9.92□□□□□ -0.82
CNIH3-201ENST00000272133 COX6B2Q6YFQ2 88 aa9.86□□□□□ -0.83
CNIH3-201ENST00000272133 CRIPTQ9P021 101 aa9.83□□□□□ -0.84
CNIH3-201ENST00000272133 H3BS24 57 aa9.82□□□□□ -0.84
CNIH3-201ENST00000272133 KRTAP10-4P60372 401 aaPredicted RBP9.79□□□□□ -0.84
CNIH3-201ENST00000272133 K7ERS5 55 aa9.77□□□□□ -0.85
CNIH3-201ENST00000272133 RYR3Q15413 4870 aa9.76□□□□□ -0.85
CNIH3-201ENST00000272133 ROMO1P60602 79 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms