RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 FBN3Q75N90 2809 aa8.52□□□□□ -1.05
PDLIM2-201ENST00000265810 IGLV7-46A0A075B6I9 117 aa8.52□□□□□ -1.05
PDLIM2-201ENST00000265810 MMP24-AS1A0A0U1RRL7 71 aa8.52□□□□□ -1.05
PDLIM2-201ENST00000265810 ACYP2P14621 99 aa8.51□□□□□ -1.05
PDLIM2-201ENST00000265810 PRR15LQ9BU68 103 aa8.5□□□□□ -1.05
PDLIM2-201ENST00000265810 Q6ZSA8 131 aa8.49□□□□□ -1.05
PDLIM2-201ENST00000265810 FP248Q71RG6 208 aaPredicted RBP8.45□□□□□ -1.06
PDLIM2-201ENST00000265810 KRTAP13-2Q52LG2 175 aa8.43□□□□□ -1.06
PDLIM2-201ENST00000265810 A6NED7 52 aa8.43□□□□□ -1.06
PDLIM2-201ENST00000265810 PSPHP1O15172 72 aa8.43□□□□□ -1.06
PDLIM2-201ENST00000265810 K7ERS5 55 aa8.39□□□□□ -1.07
PDLIM2-201ENST00000265810 COA5Q86WW8 74 aa8.36□□□□□ -1.07
PDLIM2-201ENST00000265810 Q8N1X5 172 aa8.33□□□□□ -1.08
PDLIM2-201ENST00000265810 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
PDLIM2-201ENST00000265810 ZCCHC13Q8WW36 166 aaKnown RBP8.31□□□□□ -1.08
PDLIM2-201ENST00000265810 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
PDLIM2-201ENST00000265810 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
PDLIM2-201ENST00000265810 MEGF8Q7Z7M0 2845 aa8.3□□□□□ -1.08
PDLIM2-201ENST00000265810 A0A1B0GU69 56 aa8.29□□□□□ -1.08
PDLIM2-201ENST00000265810 Q8N9P0 234 aaPredicted RBP8.29□□□□□ -1.08
PDLIM2-201ENST00000265810 KRTAP29-1A8MX34 341 aaPredicted RBP8.28□□□□□ -1.08
PDLIM2-201ENST00000265810 SPANXA2-OT1Q8N9U9 137 aa8.27□□□□□ -1.08
PDLIM2-201ENST00000265810 ASB16-AS1Q495Z4 193 aa8.27□□□□□ -1.09
PDLIM2-201ENST00000265810 Q5W150 140 aa8.26□□□□□ -1.09
PDLIM2-201ENST00000265810 KRTAP1-4P0C5Y4 121 aa8.26□□□□□ -1.09
PDLIM2-201ENST00000265810 HRES1P13985 223 aa8.25□□□□□ -1.09
PDLIM2-201ENST00000265810 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
PDLIM2-201ENST00000265810 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
PDLIM2-201ENST00000265810 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
PDLIM2-201ENST00000265810 A0A1B0GVY2 172 aa8.23□□□□□ -1.09
PDLIM2-201ENST00000265810 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
PDLIM2-201ENST00000265810 SPINK7P58062 85 aa8.2□□□□□ -1.1
PDLIM2-201ENST00000265810 Q1T7F1 81 aa8.2□□□□□ -1.1
PDLIM2-201ENST00000265810 A8MUN3 132 aa8.17□□□□□ -1.1
PDLIM2-201ENST00000265810 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
PDLIM2-201ENST00000265810 DNAH9Q9NYC9 4486 aa8.14□□□□□ -1.11
PDLIM2-201ENST00000265810 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
PDLIM2-201ENST00000265810 SEC61BP60468 96 aaKnown RBP8.1□□□□□ -1.11
PDLIM2-201ENST00000265810 DNHD1Q96M86 4753 aa8.08□□□□□ -1.12
PDLIM2-201ENST00000265810 UQCR11O14957 56 aa7.98□□□□□ -1.13
PDLIM2-201ENST00000265810 Q75L30 129 aa7.97□□□□□ -1.13
PDLIM2-201ENST00000265810 Q5VV11 94 aa7.95□□□□□ -1.14
PDLIM2-201ENST00000265810 LCA10Q71F78 164 aa7.95□□□□□ -1.14
PDLIM2-201ENST00000265810 CSMD3Q7Z407 3707 aa7.94□□□□□ -1.14
PDLIM2-201ENST00000265810 DMAC1Q96GE9 116 aa7.93□□□□□ -1.14
PDLIM2-201ENST00000265810 PLECQ15149 4684 aaKnown RBP7.93□□□□□ -1.14
PDLIM2-201ENST00000265810 RPL37P61927 97 aaKnown RBP7.92□□□□□ -1.14
PDLIM2-201ENST00000265810 S4R3F8 94 aa7.91□□□□□ -1.14
PDLIM2-201ENST00000265810 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
PDLIM2-201ENST00000265810 ANK2Q01484 3957 aa7.91□□□□□ -1.14
PDLIM2-201ENST00000265810 A8MUU9 505 aa7.9□□□□□ -1.15
PDLIM2-201ENST00000265810 M0R2T5 61 aa7.89□□□□□ -1.15
PDLIM2-201ENST00000265810 CSAG1Q6PB30 78 aa7.89□□□□□ -1.15
PDLIM2-201ENST00000265810 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
PDLIM2-201ENST00000265810 KRTAP10-8P60410 259 aa7.88□□□□□ -1.15
PDLIM2-201ENST00000265810 C20orf166-AS1Q96NR2 134 aa7.88□□□□□ -1.15
PDLIM2-201ENST00000265810 PRKDCP78527 4128 aaKnown RBP7.85□□□□□ -1.15
PDLIM2-201ENST00000265810 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
PDLIM2-201ENST00000265810 XP32Q5T750 250 aa7.83□□□□□ -1.16
PDLIM2-201ENST00000265810 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
PDLIM2-201ENST00000265810 A0A0D9SG42 100 aa7.82□□□□□ -1.16
PDLIM2-201ENST00000265810 A8MU10 97 aa7.79□□□□□ -1.16
PDLIM2-201ENST00000265810 KRTAP16-1A8MUX0 517 aa7.79□□□□□ -1.16
PDLIM2-201ENST00000265810 A0A1B0GU33 70 aa7.79□□□□□ -1.16
PDLIM2-201ENST00000265810 H3BS24 57 aa7.78□□□□□ -1.16
PDLIM2-201ENST00000265810 STARD9Q9P2P6 4700 aa7.78□□□□□ -1.16
PDLIM2-201ENST00000265810 A6NN06 94 aa7.76□□□□□ -1.17
PDLIM2-201ENST00000265810 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
PDLIM2-201ENST00000265810 TPRXLQ17RH7 258 aa7.73□□□□□ -1.17
PDLIM2-201ENST00000265810 KRTAP13-3Q3SY46 172 aa7.72□□□□□ -1.17
PDLIM2-201ENST00000265810 SPINT4Q6UDR6 99 aa7.72□□□□□ -1.17
PDLIM2-201ENST00000265810 H1FX-AS1Q4G0G2 97 aa7.72□□□□□ -1.17
PDLIM2-201ENST00000265810 ALMS1Q8TCU4 4167 aa7.71□□□□□ -1.17
PDLIM2-201ENST00000265810 VPS13DQ5THJ4 4388 aa7.71□□□□□ -1.18
PDLIM2-201ENST00000265810 CMYA5Q8N3K9 4069 aa7.7□□□□□ -1.18
PDLIM2-201ENST00000265810 DNAH10Q8IVF4 4471 aa7.69□□□□□ -1.18
PDLIM2-201ENST00000265810 DNAH3Q8TD57 4116 aa7.69□□□□□ -1.18
PDLIM2-201ENST00000265810 PRAC1Q96KF2 57 aa7.65□□□□□ -1.18
PDLIM2-201ENST00000265810 DNAH5Q8TE73 4624 aa7.64□□□□□ -1.19
PDLIM2-201ENST00000265810 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
PDLIM2-201ENST00000265810 DNAH11Q96DT5 4516 aa7.63□□□□□ -1.19
PDLIM2-201ENST00000265810 R4GN34 69 aa7.62□□□□□ -1.19
PDLIM2-201ENST00000265810 ADM2Q7Z4H4 148 aa7.6□□□□□ -1.19
PDLIM2-201ENST00000265810 KRTAP4-5Q9BYR2 181 aa7.56□□□□□ -1.2
PDLIM2-201ENST00000265810 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
PDLIM2-201ENST00000265810 KMT2AQ03164 3969 aa7.53□□□□□ -1.2
PDLIM2-201ENST00000265810 M0QZ58 72 aa7.52□□□□□ -1.2
PDLIM2-201ENST00000265810 DNAH17Q9UFH2 4485 aa7.51□□□□□ -1.21
PDLIM2-201ENST00000265810 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
PDLIM2-201ENST00000265810 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
PDLIM2-201ENST00000265810 DYNC1H1Q14204 4646 aaKnown RBP7.47□□□□□ -1.21
PDLIM2-201ENST00000265810 CRIPTQ9P021 101 aa7.44□□□□□ -1.22
PDLIM2-201ENST00000265810 LRP1BQ9NZR2 4599 aa7.43□□□□□ -1.22
PDLIM2-201ENST00000265810 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
PDLIM2-201ENST00000265810 FAT1Q14517 4588 aa7.41□□□□□ -1.22
PDLIM2-201ENST00000265810 DYNC2H1Q8NCM8 4307 aaKnown RBP7.41□□□□□ -1.22
PDLIM2-201ENST00000265810 LYSTQ99698 3801 aa7.39□□□□□ -1.23
PDLIM2-201ENST00000265810 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
PDLIM2-201ENST00000265810 SACSQ9NZJ4 4579 aa7.26□□□□□ -1.25
PDLIM2-201ENST00000265810 KIAA1109Q2LD37 5005 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms