RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 IGLV5-52A0A0A0MRZ9 124 aa7.38□□□□□ -1.23
CHMP3-201ENST00000263856 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
CHMP3-201ENST00000263856 HRES1P13985 223 aa7.38□□□□□ -1.23
CHMP3-201ENST00000263856 ZNF861PO60384 105 aa7.37□□□□□ -1.23
CHMP3-201ENST00000263856 STARD9Q9P2P6 4700 aa7.37□□□□□ -1.23
CHMP3-201ENST00000263856 LOC101927531A0A1B0GV80 90 aa7.36□□□□□ -1.23
CHMP3-201ENST00000263856 Q5W150 140 aa7.35□□□□□ -1.23
CHMP3-201ENST00000263856 Q6ZR54 194 aa7.35□□□□□ -1.23
CHMP3-201ENST00000263856 Q75L30 129 aa7.35□□□□□ -1.23
CHMP3-201ENST00000263856 DNAH8Q96JB1 4490 aa7.35□□□□□ -1.23
CHMP3-201ENST00000263856 LINC00483Q53H64 154 aa7.34□□□□□ -1.23
CHMP3-201ENST00000263856 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
CHMP3-201ENST00000263856 KMT2AQ03164 3969 aa7.34□□□□□ -1.23
CHMP3-201ENST00000263856 SPINK7P58062 85 aa7.33□□□□□ -1.24
CHMP3-201ENST00000263856 MEGF8Q7Z7M0 2845 aa7.32□□□□□ -1.24
CHMP3-201ENST00000263856 ASB16-AS1Q495Z4 193 aa7.31□□□□□ -1.24
CHMP3-201ENST00000263856 LY6G6CO95867 125 aa7.29□□□□□ -1.24
CHMP3-201ENST00000263856 HECTD4Q9Y4D8 3996 aa7.29□□□□□ -1.24
CHMP3-201ENST00000263856 LINC01558Q9Y6Z2 57 aa7.29□□□□□ -1.24
CHMP3-201ENST00000263856 DNAH17Q9UFH2 4485 aa7.28□□□□□ -1.24
CHMP3-201ENST00000263856 ATP11AUNQ6ZP68 121 aa7.28□□□□□ -1.24
CHMP3-201ENST00000263856 CDC42SE1Q9NRR8 79 aa7.28□□□□□ -1.24
CHMP3-201ENST00000263856 IGLV7-43P04211 117 aa7.27□□□□□ -1.25
CHMP3-201ENST00000263856 PLAC8Q9NZF1 115 aa7.26□□□□□ -1.25
CHMP3-201ENST00000263856 KTN1-AS1Q86SY8 53 aa7.26□□□□□ -1.25
CHMP3-201ENST00000263856 C1orf134Q5TEV5 83 aa7.25□□□□□ -1.25
CHMP3-201ENST00000263856 DNAH2Q9P225 4427 aa7.24□□□□□ -1.25
CHMP3-201ENST00000263856 DYNC2H1Q8NCM8 4307 aaKnown RBP7.24□□□□□ -1.25
CHMP3-201ENST00000263856 PRKDCP78527 4128 aaKnown RBP7.23□□□□□ -1.25
CHMP3-201ENST00000263856 LINC00313P59037 77 aa7.23□□□□□ -1.25
CHMP3-201ENST00000263856 VPS13DQ5THJ4 4388 aa7.23□□□□□ -1.25
CHMP3-201ENST00000263856 ACYP2P14621 99 aa7.22□□□□□ -1.25
CHMP3-201ENST00000263856 IGKV2D-30A0A075B6S6 120 aa7.21□□□□□ -1.25
CHMP3-201ENST00000263856 IGKV2-30P06310 120 aa7.21□□□□□ -1.25
CHMP3-201ENST00000263856 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
CHMP3-201ENST00000263856 A6NN06 94 aa7.18□□□□□ -1.26
CHMP3-201ENST00000263856 RBM12B-AS1Q9P1G2 102 aa7.18□□□□□ -1.26
CHMP3-201ENST00000263856 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
CHMP3-201ENST00000263856 A0A1B0GU69 56 aa7.16□□□□□ -1.26
CHMP3-201ENST00000263856 DNAH11Q96DT5 4516 aa7.15□□□□□ -1.26
CHMP3-201ENST00000263856 SPINK1P00995 79 aa7.15□□□□□ -1.27
CHMP3-201ENST00000263856 C8orf87E5RJ46 101 aa7.14□□□□□ -1.27
CHMP3-201ENST00000263856 SSBP3-AS1Q7Z2R9 100 aa7.14□□□□□ -1.27
CHMP3-201ENST00000263856 FAM229AH3BQW9 127 aa7.14□□□□□ -1.27
CHMP3-201ENST00000263856 KRTAP13-3Q3SY46 172 aa7.14□□□□□ -1.27
CHMP3-201ENST00000263856 C7orf65Q6ZTY9 151 aa7.12□□□□□ -1.27
CHMP3-201ENST00000263856 KRTAP13-2Q52LG2 175 aa7.12□□□□□ -1.27
CHMP3-201ENST00000263856 PRAC1Q96KF2 57 aa7.12□□□□□ -1.27
CHMP3-201ENST00000263856 ALMS1Q8TCU4 4167 aa7.11□□□□□ -1.27
CHMP3-201ENST00000263856 DMAC1Q96GE9 116 aa7.1□□□□□ -1.27
CHMP3-201ENST00000263856 C4orf48Q5BLP8 95 aa7.08□□□□□ -1.28
CHMP3-201ENST00000263856 ADM2Q7Z4H4 148 aa7.07□□□□□ -1.28
CHMP3-201ENST00000263856 DNAH5Q8TE73 4624 aa7.06□□□□□ -1.28
CHMP3-201ENST00000263856 KRTAP10-1P60331 282 aa7.05□□□□□ -1.28
CHMP3-201ENST00000263856 Q8N1X5 172 aa7.05□□□□□ -1.28
CHMP3-201ENST00000263856 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
CHMP3-201ENST00000263856 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
CHMP3-201ENST00000263856 MIR22HGQ0VDD5 57 aa7.02□□□□□ -1.29
CHMP3-201ENST00000263856 TYMSOSQ8TAI1 123 aa7.02□□□□□ -1.29
CHMP3-201ENST00000263856 DNHD1Q96M86 4753 aa6.99□□□□□ -1.29
CHMP3-201ENST00000263856 UQCR11O14957 56 aa6.99□□□□□ -1.29
CHMP3-201ENST00000263856 KRTAP16-1A8MUX0 517 aa6.98□□□□□ -1.29
CHMP3-201ENST00000263856 HYDINQ4G0P3 5121 aa6.97□□□□□ -1.29
CHMP3-201ENST00000263856 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
CHMP3-201ENST00000263856 C9orf92A6NGG3 77 aa6.96□□□□□ -1.3
CHMP3-201ENST00000263856 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
CHMP3-201ENST00000263856 SMR3BP02814 79 aaPredicted RBP6.93□□□□□ -1.3
CHMP3-201ENST00000263856 SPATA8Q6RVD6 105 aa6.91□□□□□ -1.3
CHMP3-201ENST00000263856 LINC00304Q8N9R0 145 aa6.87□□□□□ -1.31
CHMP3-201ENST00000263856 FAT2Q9NYQ8 4349 aa6.87□□□□□ -1.31
CHMP3-201ENST00000263856 Q6ZSA8 131 aa6.87□□□□□ -1.31
CHMP3-201ENST00000263856 PKD1P98161 4303 aa6.83□□□□□ -1.32
CHMP3-201ENST00000263856 CSAG1Q6PB30 78 aa6.83□□□□□ -1.32
CHMP3-201ENST00000263856 FLG2Q5D862 2391 aaPredicted RBP6.82□□□□□ -1.32
CHMP3-201ENST00000263856 PKHD1P08F94 4074 aa6.81□□□□□ -1.32
CHMP3-201ENST00000263856 LINC01554Q52M75 96 aa6.78□□□□□ -1.32
CHMP3-201ENST00000263856 FAT1Q14517 4588 aa6.75□□□□□ -1.33
CHMP3-201ENST00000263856 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
CHMP3-201ENST00000263856 H0YAA0 97 aa6.71□□□□□ -1.33
CHMP3-201ENST00000263856 A0A1B0GU33 70 aa6.7□□□□□ -1.34
CHMP3-201ENST00000263856 CRIPTQ9P021 101 aa6.7□□□□□ -1.34
CHMP3-201ENST00000263856 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
CHMP3-201ENST00000263856 DYNC1H1Q14204 4646 aaKnown RBP6.64□□□□□ -1.35
CHMP3-201ENST00000263856 H1FX-AS1Q4G0G2 97 aa6.63□□□□□ -1.35
CHMP3-201ENST00000263856 A8MUU9 505 aa6.62□□□□□ -1.35
CHMP3-201ENST00000263856 C20orf166-AS1Q96NR2 134 aa6.61□□□□□ -1.35
CHMP3-201ENST00000263856 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
CHMP3-201ENST00000263856 RPS29P62273 56 aaKnown RBP6.58□□□□□ -1.36
CHMP3-201ENST00000263856 A0A0D9SG42 100 aa6.57□□□□□ -1.36
CHMP3-201ENST00000263856 K7ERS5 55 aa6.56□□□□□ -1.36
CHMP3-201ENST00000263856 COX6B2Q6YFQ2 88 aa6.54□□□□□ -1.36
CHMP3-201ENST00000263856 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
CHMP3-201ENST00000263856 MYCBP2O75592 4640 aa6.5□□□□□ -1.37
CHMP3-201ENST00000263856 LRP1Q07954 4544 aaKnown RBP6.49□□□□□ -1.37
CHMP3-201ENST00000263856 APOBP04114 4563 aaKnown RBP6.49□□□□□ -1.37
CHMP3-201ENST00000263856 H3BS24 57 aa6.47□□□□□ -1.37
CHMP3-201ENST00000263856 KRTAP10-4P60372 401 aaPredicted RBP6.45□□□□□ -1.38
CHMP3-201ENST00000263856 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
CHMP3-201ENST00000263856 HSPG2P98160 4391 aa6.41□□□□□ -1.38
CHMP3-201ENST00000263856 A0A1B0GVY2 172 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms