RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 ACYP2P14621 99 aa9.69□□□□□ -0.86
PDZRN3-201ENST00000263666 IGLV7-46A0A075B6I9 117 aa9.69□□□□□ -0.86
PDZRN3-201ENST00000263666 A0A1B0GU69 56 aa9.67□□□□□ -0.86
PDZRN3-201ENST00000263666 C7orf65Q6ZTY9 151 aa9.67□□□□□ -0.86
PDZRN3-201ENST00000263666 LCE6AA0A183 80 aa9.67□□□□□ -0.86
PDZRN3-201ENST00000263666 TYMSOSQ8TAI1 123 aa9.66□□□□□ -0.86
PDZRN3-201ENST00000263666 HRES1P13985 223 aa9.65□□□□□ -0.86
PDZRN3-201ENST00000263666 Q96NJ1 140 aa9.65□□□□□ -0.86
PDZRN3-201ENST00000263666 SPINK7P58062 85 aa9.61□□□□□ -0.87
PDZRN3-201ENST00000263666 Q5W150 140 aa9.6□□□□□ -0.87
PDZRN3-201ENST00000263666 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
PDZRN3-201ENST00000263666 KRTAP10-2P60368 255 aa9.59□□□□□ -0.87
PDZRN3-201ENST00000263666 Q6ZR54 194 aa9.58□□□□□ -0.88
PDZRN3-201ENST00000263666 Q8N1X5 172 aa9.57□□□□□ -0.88
PDZRN3-201ENST00000263666 KRTAP21-3Q3LHN1 58 aa9.56□□□□□ -0.88
PDZRN3-201ENST00000263666 ATP11AUNQ6ZP68 121 aa9.56□□□□□ -0.88
PDZRN3-201ENST00000263666 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
PDZRN3-201ENST00000263666 C9orf92A6NGG3 77 aa9.55□□□□□ -0.88
PDZRN3-201ENST00000263666 SSBP3-AS1Q7Z2R9 100 aa9.55□□□□□ -0.88
PDZRN3-201ENST00000263666 KRTAP13-1Q8IUC0 172 aa9.53□□□□□ -0.88
PDZRN3-201ENST00000263666 MEGF8Q7Z7M0 2845 aa9.53□□□□□ -0.88
PDZRN3-201ENST00000263666 LCA10Q71F78 164 aa9.53□□□□□ -0.88
PDZRN3-201ENST00000263666 C8orf87E5RJ46 101 aa9.51□□□□□ -0.89
PDZRN3-201ENST00000263666 KRTAP10-1P60331 282 aa9.51□□□□□ -0.89
PDZRN3-201ENST00000263666 Q75L30 129 aa9.5□□□□□ -0.89
PDZRN3-201ENST00000263666 CDC42SE1Q9NRR8 79 aa9.49□□□□□ -0.89
PDZRN3-201ENST00000263666 FLG2Q5D862 2391 aaPredicted RBP9.49□□□□□ -0.89
PDZRN3-201ENST00000263666 KTN1-AS1Q86SY8 53 aa9.47□□□□□ -0.89
PDZRN3-201ENST00000263666 LINC00483Q53H64 154 aa9.47□□□□□ -0.89
PDZRN3-201ENST00000263666 DNAH10Q8IVF4 4471 aa9.46□□□□□ -0.89
PDZRN3-201ENST00000263666 LINC01558Q9Y6Z2 57 aa9.45□□□□□ -0.9
PDZRN3-201ENST00000263666 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
PDZRN3-201ENST00000263666 LINC00304Q8N9R0 145 aa9.43□□□□□ -0.9
PDZRN3-201ENST00000263666 ANK2Q01484 3957 aa9.42□□□□□ -0.9
PDZRN3-201ENST00000263666 MIR22HGQ0VDD5 57 aa9.39□□□□□ -0.91
PDZRN3-201ENST00000263666 HUWE1Q7Z6Z7 4374 aaKnown RBP9.38□□□□□ -0.91
PDZRN3-201ENST00000263666 UQCR11O14957 56 aa9.37□□□□□ -0.91
PDZRN3-201ENST00000263666 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
PDZRN3-201ENST00000263666 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
PDZRN3-201ENST00000263666 J3QL48 77 aa9.29□□□□□ -0.92
PDZRN3-201ENST00000263666 K7ERS5 55 aa9.24□□□□□ -0.93
PDZRN3-201ENST00000263666 LYSTQ99698 3801 aa9.24□□□□□ -0.93
PDZRN3-201ENST00000263666 ADM2Q7Z4H4 148 aa9.23□□□□□ -0.93
PDZRN3-201ENST00000263666 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
PDZRN3-201ENST00000263666 ASB16-AS1Q495Z4 193 aa9.18□□□□□ -0.94
PDZRN3-201ENST00000263666 Q5VSD8 79 aa9.17□□□□□ -0.94
PDZRN3-201ENST00000263666 A6NN06 94 aa9.16□□□□□ -0.94
PDZRN3-201ENST00000263666 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
PDZRN3-201ENST00000263666 CRIPTQ9P021 101 aa9.14□□□□□ -0.95
PDZRN3-201ENST00000263666 A0A0D9SG42 100 aa9.1□□□□□ -0.95
PDZRN3-201ENST00000263666 DNAH9Q9NYC9 4486 aa9.08□□□□□ -0.96
PDZRN3-201ENST00000263666 CSAG1Q6PB30 78 aa9.07□□□□□ -0.96
PDZRN3-201ENST00000263666 A0A1B0GU33 70 aa9.01□□□□□ -0.97
PDZRN3-201ENST00000263666 KRTAP1-4P0C5Y4 121 aa9□□□□□ -0.97
PDZRN3-201ENST00000263666 SPATA8Q6RVD6 105 aa8.99□□□□□ -0.97
PDZRN3-201ENST00000263666 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.98
PDZRN3-201ENST00000263666 Q6ZSA8 131 aa8.96□□□□□ -0.98
PDZRN3-201ENST00000263666 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
PDZRN3-201ENST00000263666 DNAH1Q9P2D7 4330 aa8.93□□□□□ -0.98
PDZRN3-201ENST00000263666 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
PDZRN3-201ENST00000263666 DNAH11Q96DT5 4516 aa8.91□□□□□ -0.98
PDZRN3-201ENST00000263666 KRTAP16-1A8MUX0 517 aa8.91□□□□□ -0.98
PDZRN3-201ENST00000263666 DNAH7Q8WXX0 4024 aa8.9□□□□□ -0.98
PDZRN3-201ENST00000263666 CMYA5Q8N3K9 4069 aa8.88□□□□□ -0.99
PDZRN3-201ENST00000263666 KMT2AQ03164 3969 aa8.85□□□□□ -0.99
PDZRN3-201ENST00000263666 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
PDZRN3-201ENST00000263666 FRAS1Q86XX4 4008 aa8.82□□□□□ -1
PDZRN3-201ENST00000263666 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
PDZRN3-201ENST00000263666 COX6B2Q6YFQ2 88 aa8.79□□□□□ -1
PDZRN3-201ENST00000263666 DNAH8Q96JB1 4490 aa8.78□□□□□ -1
PDZRN3-201ENST00000263666 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
PDZRN3-201ENST00000263666 DNHD1Q96M86 4753 aa8.73□□□□□ -1.01
PDZRN3-201ENST00000263666 DNAH3Q8TD57 4116 aa8.7□□□□□ -1.02
PDZRN3-201ENST00000263666 H0YAA0 97 aa8.68□□□□□ -1.02
PDZRN3-201ENST00000263666 DNAH17Q9UFH2 4485 aa8.68□□□□□ -1.02
PDZRN3-201ENST00000263666 VPS13DQ5THJ4 4388 aa8.67□□□□□ -1.02
PDZRN3-201ENST00000263666 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
PDZRN3-201ENST00000263666 A0A1B0GVY2 172 aa8.67□□□□□ -1.02
PDZRN3-201ENST00000263666 A8MUU9 505 aa8.63□□□□□ -1.03
PDZRN3-201ENST00000263666 RPS29P62273 56 aaKnown RBP8.62□□□□□ -1.03
PDZRN3-201ENST00000263666 S4R3F8 94 aa8.62□□□□□ -1.03
PDZRN3-201ENST00000263666 DNAH2Q9P225 4427 aa8.61□□□□□ -1.03
PDZRN3-201ENST00000263666 H3BS24 57 aa8.6□□□□□ -1.03
PDZRN3-201ENST00000263666 DNAH6Q9C0G6 4158 aa8.6□□□□□ -1.03
PDZRN3-201ENST00000263666 C20orf166-AS1Q96NR2 134 aa8.6□□□□□ -1.03
PDZRN3-201ENST00000263666 FAT1Q14517 4588 aa8.57□□□□□ -1.04
PDZRN3-201ENST00000263666 RPL37P61927 97 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-201ENST00000263666 DNAH5Q8TE73 4624 aa8.53□□□□□ -1.04
PDZRN3-201ENST00000263666 KRTAP3-1Q9BYR8 98 aa8.52□□□□□ -1.05
PDZRN3-201ENST00000263666 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-201ENST00000263666 HECTD4Q9Y4D8 3996 aa8.51□□□□□ -1.05
PDZRN3-201ENST00000263666 KRTAP25-1Q3LHN0 102 aa8.51□□□□□ -1.05
PDZRN3-201ENST00000263666 ROMO1P60602 79 aa8.48□□□□□ -1.05
PDZRN3-201ENST00000263666 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
PDZRN3-201ENST00000263666 VPS13BQ7Z7G8 4022 aa8.4□□□□□ -1.06
PDZRN3-201ENST00000263666 P0C880 135 aa8.37□□□□□ -1.07
PDZRN3-201ENST00000263666 MYCBP2O75592 4640 aa8.37□□□□□ -1.07
PDZRN3-201ENST00000263666 M0R2T5 61 aa8.37□□□□□ -1.07
PDZRN3-201ENST00000263666 XP32Q5T750 250 aa8.37□□□□□ -1.07
PDZRN3-201ENST00000263666 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms