RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 LINC01554Q52M75 96 aa9.6□□□□□ -0.87
PRPF40B-201ENST00000261897 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.59□□□□□ -0.87
PRPF40B-201ENST00000261897 KRTAP24-1Q3LI83 254 aa9.59□□□□□ -0.87
PRPF40B-201ENST00000261897 TGP01266 2768 aa9.59□□□□□ -0.87
PRPF40B-201ENST00000261897 CSAG1Q6PB30 78 aa9.57□□□□□ -0.88
PRPF40B-201ENST00000261897 ANK3Q12955 4377 aaKnown RBP9.55□□□□□ -0.88
PRPF40B-201ENST00000261897 UQCR11O14957 56 aa9.55□□□□□ -0.88
PRPF40B-201ENST00000261897 ZNF706Q9Y5V0 76 aaPredicted RBP9.54□□□□□ -0.88
PRPF40B-201ENST00000261897 PSORS1C2Q9UIG4 136 aa9.53□□□□□ -0.88
PRPF40B-201ENST00000261897 SPRR1BP22528 89 aa9.5□□□□□ -0.89
PRPF40B-201ENST00000261897 SPACA4Q8TDM5 124 aa9.49□□□□□ -0.89
PRPF40B-201ENST00000261897 Q96NJ1 140 aa9.49□□□□□ -0.89
PRPF40B-201ENST00000261897 CRIPTQ9P021 101 aa9.49□□□□□ -0.89
PRPF40B-201ENST00000261897 Q6ZR54 194 aa9.49□□□□□ -0.89
PRPF40B-201ENST00000261897 Q8N1X5 172 aa9.46□□□□□ -0.89
PRPF40B-201ENST00000261897 FBN3Q75N90 2809 aa9.44□□□□□ -0.9
PRPF40B-201ENST00000261897 NBDYA0A0U1RRE5 68 aa9.44□□□□□ -0.9
PRPF40B-201ENST00000261897 WWC2-AS2Q96NR7 200 aa9.41□□□□□ -0.9
PRPF40B-201ENST00000261897 ZNF861PO60384 105 aa9.39□□□□□ -0.91
PRPF40B-201ENST00000261897 IGLV5-52A0A0A0MRZ9 124 aa9.38□□□□□ -0.91
PRPF40B-201ENST00000261897 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
PRPF40B-201ENST00000261897 PLAC8Q9NZF1 115 aa9.34□□□□□ -0.91
PRPF40B-201ENST00000261897 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
PRPF40B-201ENST00000261897 APLNQ9ULZ1 77 aa9.31□□□□□ -0.92
PRPF40B-201ENST00000261897 PLA2G1BP04054 148 aaKnown RBP9.3□□□□□ -0.92
PRPF40B-201ENST00000261897 DMAC1Q96GE9 116 aa9.29□□□□□ -0.92
PRPF40B-201ENST00000261897 A0A087WTM6 91 aa9.28□□□□□ -0.92
PRPF40B-201ENST00000261897 SSBP3-AS1Q7Z2R9 100 aa9.28□□□□□ -0.92
PRPF40B-201ENST00000261897 LY6G6CO95867 125 aa9.27□□□□□ -0.92
PRPF40B-201ENST00000261897 SPATA8Q6RVD6 105 aa9.25□□□□□ -0.93
PRPF40B-201ENST00000261897 DNAH10Q8IVF4 4471 aa9.25□□□□□ -0.93
PRPF40B-201ENST00000261897 KRTAP13-1Q8IUC0 172 aa9.25□□□□□ -0.93
PRPF40B-201ENST00000261897 IGLV7-43P04211 117 aa9.22□□□□□ -0.93
PRPF40B-201ENST00000261897 ASB16-AS1Q495Z4 193 aa9.22□□□□□ -0.93
PRPF40B-201ENST00000261897 K7ERS5 55 aa9.17□□□□□ -0.94
PRPF40B-201ENST00000261897 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
PRPF40B-201ENST00000261897 NUPR2A6NF83 97 aa9.16□□□□□ -0.94
PRPF40B-201ENST00000261897 C9orf92A6NGG3 77 aa9.15□□□□□ -0.94
PRPF40B-201ENST00000261897 MEGF8Q7Z7M0 2845 aa9.14□□□□□ -0.95
PRPF40B-201ENST00000261897 ANK2Q01484 3957 aa9.14□□□□□ -0.95
PRPF40B-201ENST00000261897 LYSTQ99698 3801 aa9.13□□□□□ -0.95
PRPF40B-201ENST00000261897 A0A0D9SG42 100 aa9.09□□□□□ -0.95
PRPF40B-201ENST00000261897 SPINT4Q6UDR6 99 aa9.09□□□□□ -0.95
PRPF40B-201ENST00000261897 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
PRPF40B-201ENST00000261897 A0A1B0GU33 70 aa9.05□□□□□ -0.96
PRPF40B-201ENST00000261897 Q6ZRN7 208 aaPredicted RBP9.05□□□□□ -0.96
PRPF40B-201ENST00000261897 KRTAP13-3Q3SY46 172 aa9.03□□□□□ -0.96
PRPF40B-201ENST00000261897 KRTAP13-2Q52LG2 175 aa8.95□□□□□ -0.98
PRPF40B-201ENST00000261897 KRTAP25-1Q3LHN0 102 aa8.94□□□□□ -0.98
PRPF40B-201ENST00000261897 Q6ZSA8 131 aa8.94□□□□□ -0.98
PRPF40B-201ENST00000261897 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
PRPF40B-201ENST00000261897 LINC00304Q8N9R0 145 aa8.93□□□□□ -0.98
PRPF40B-201ENST00000261897 ROMO1P60602 79 aa8.92□□□□□ -0.98
PRPF40B-201ENST00000261897 H0YAA0 97 aa8.91□□□□□ -0.98
PRPF40B-201ENST00000261897 SMR3BP02814 79 aaPredicted RBP8.91□□□□□ -0.98
PRPF40B-201ENST00000261897 A8MUU9 505 aa8.88□□□□□ -0.99
PRPF40B-201ENST00000261897 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
PRPF40B-201ENST00000261897 DNAH9Q9NYC9 4486 aa8.82□□□□□ -1
PRPF40B-201ENST00000261897 H1FX-AS1Q4G0G2 97 aa8.82□□□□□ -1
PRPF40B-201ENST00000261897 FRAS1Q86XX4 4008 aa8.79□□□□□ -1
PRPF40B-201ENST00000261897 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
PRPF40B-201ENST00000261897 KRTAP10-1P60331 282 aa8.78□□□□□ -1
PRPF40B-201ENST00000261897 C10orf95Q9H7T3 257 aa8.74□□□□□ -1.01
PRPF40B-201ENST00000261897 NDUFAF8A1L188 74 aa8.7□□□□□ -1.02
PRPF40B-201ENST00000261897 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
PRPF40B-201ENST00000261897 DNAH7Q8WXX0 4024 aa8.65□□□□□ -1.02
PRPF40B-201ENST00000261897 PLECQ15149 4684 aaKnown RBP8.64□□□□□ -1.03
PRPF40B-201ENST00000261897 RPL37P61927 97 aaKnown RBP8.61□□□□□ -1.03
PRPF40B-201ENST00000261897 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
PRPF40B-201ENST00000261897 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.03
PRPF40B-201ENST00000261897 P0C880 135 aa8.59□□□□□ -1.03
PRPF40B-201ENST00000261897 CMYA5Q8N3K9 4069 aa8.59□□□□□ -1.03
PRPF40B-201ENST00000261897 DNAH1Q9P2D7 4330 aa8.52□□□□□ -1.05
PRPF40B-201ENST00000261897 DNAH17Q9UFH2 4485 aa8.51□□□□□ -1.05
PRPF40B-201ENST00000261897 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
PRPF40B-201ENST00000261897 KMT2AQ03164 3969 aa8.47□□□□□ -1.05
PRPF40B-201ENST00000261897 ALMS1Q8TCU4 4167 aa8.47□□□□□ -1.05
PRPF40B-201ENST00000261897 DNAH11Q96DT5 4516 aa8.47□□□□□ -1.05
PRPF40B-201ENST00000261897 TPRXLQ17RH7 258 aa8.42□□□□□ -1.06
PRPF40B-201ENST00000261897 STARD9Q9P2P6 4700 aa8.4□□□□□ -1.06
PRPF40B-201ENST00000261897 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
PRPF40B-201ENST00000261897 KRTAP13-4Q3LI77 160 aa8.35□□□□□ -1.07
PRPF40B-201ENST00000261897 S4R3F8 94 aa8.34□□□□□ -1.07
PRPF40B-201ENST00000261897 LRP1BQ9NZR2 4599 aa8.32□□□□□ -1.08
PRPF40B-201ENST00000261897 DNAH6Q9C0G6 4158 aa8.32□□□□□ -1.08
PRPF40B-201ENST00000261897 DNAH2Q9P225 4427 aa8.27□□□□□ -1.09
PRPF40B-201ENST00000261897 HECTD4Q9Y4D8 3996 aa8.25□□□□□ -1.09
PRPF40B-201ENST00000261897 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
PRPF40B-201ENST00000261897 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
PRPF40B-201ENST00000261897 DNAH3Q8TD57 4116 aa8.18□□□□□ -1.1
PRPF40B-201ENST00000261897 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
PRPF40B-201ENST00000261897 KRTAP10-6P60371 365 aaPredicted RBP8.17□□□□□ -1.1
PRPF40B-201ENST00000261897 VPS13BQ7Z7G8 4022 aa8.11□□□□□ -1.11
PRPF40B-201ENST00000261897 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
PRPF40B-201ENST00000261897 M0QZ58 72 aa8.09□□□□□ -1.11
PRPF40B-201ENST00000261897 FAT1Q14517 4588 aa8.08□□□□□ -1.12
PRPF40B-201ENST00000261897 MYCBP2O75592 4640 aa8.07□□□□□ -1.12
PRPF40B-201ENST00000261897 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
PRPF40B-201ENST00000261897 A0A0A0MQY5 61 aa8.05□□□□□ -1.12
PRPF40B-201ENST00000261897 R4GN34 69 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 188.7 ms