RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 HRES1P13985 223 aa6.51□□□□□ -1.37
CHRNA1-201ENST00000261007 LY6G6CO95867 125 aa6.49□□□□□ -1.37
CHRNA1-201ENST00000261007 LINC00483Q53H64 154 aa6.49□□□□□ -1.37
CHRNA1-201ENST00000261007 WWC2-AS2Q96NR7 200 aa6.49□□□□□ -1.37
CHRNA1-201ENST00000261007 A0A1B0GVX0 72 aa6.48□□□□□ -1.37
CHRNA1-201ENST00000261007 SPINK7P58062 85 aa6.48□□□□□ -1.37
CHRNA1-201ENST00000261007 MRPL34Q9BQ48 92 aaKnown RBP6.47□□□□□ -1.37
CHRNA1-201ENST00000261007 ZNF861PO60384 105 aa6.46□□□□□ -1.37
CHRNA1-201ENST00000261007 PSORS1C2Q9UIG4 136 aa6.46□□□□□ -1.37
CHRNA1-201ENST00000261007 PLECQ15149 4684 aaKnown RBP6.44□□□□□ -1.38
CHRNA1-201ENST00000261007 CDK2AP2O75956 126 aa6.44□□□□□ -1.38
CHRNA1-201ENST00000261007 DNAH10Q8IVF4 4471 aa6.43□□□□□ -1.38
CHRNA1-201ENST00000261007 VPS13DQ5THJ4 4388 aa6.43□□□□□ -1.38
CHRNA1-201ENST00000261007 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
CHRNA1-201ENST00000261007 CSMD3Q7Z407 3707 aa6.42□□□□□ -1.38
CHRNA1-201ENST00000261007 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
CHRNA1-201ENST00000261007 IGLV7-43P04211 117 aa6.4□□□□□ -1.38
CHRNA1-201ENST00000261007 DNAH7Q8WXX0 4024 aa6.4□□□□□ -1.38
CHRNA1-201ENST00000261007 STARD9Q9P2P6 4700 aa6.4□□□□□ -1.39
CHRNA1-201ENST00000261007 ACYP2P14621 99 aa6.4□□□□□ -1.39
CHRNA1-201ENST00000261007 LYSTQ99698 3801 aa6.4□□□□□ -1.39
CHRNA1-201ENST00000261007 A0A087X002 238 aa6.38□□□□□ -1.39
CHRNA1-201ENST00000261007 LCE2AQ5TA79 106 aaPredicted RBP6.38□□□□□ -1.39
CHRNA1-201ENST00000261007 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
CHRNA1-201ENST00000261007 KRTAP13-3Q3SY46 172 aa6.37□□□□□ -1.39
CHRNA1-201ENST00000261007 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
CHRNA1-201ENST00000261007 PRR26Q8N8Z3 221 aa6.37□□□□□ -1.39
CHRNA1-201ENST00000261007 PRKDCP78527 4128 aaKnown RBP6.37□□□□□ -1.39
CHRNA1-201ENST00000261007 Q6ZSA8 131 aa6.35□□□□□ -1.39
CHRNA1-201ENST00000261007 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
CHRNA1-201ENST00000261007 CIRBP-AS1Q8TBR5 109 aa6.35□□□□□ -1.39
CHRNA1-201ENST00000261007 LINC00313P59037 77 aa6.34□□□□□ -1.39
CHRNA1-201ENST00000261007 KRTAP10-2P60368 255 aa6.34□□□□□ -1.39
CHRNA1-201ENST00000261007 SSBP3-AS1Q7Z2R9 100 aa6.34□□□□□ -1.39
CHRNA1-201ENST00000261007 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
CHRNA1-201ENST00000261007 FAM229AH3BQW9 127 aa6.33□□□□□ -1.4
CHRNA1-201ENST00000261007 Q5W150 140 aa6.33□□□□□ -1.4
CHRNA1-201ENST00000261007 DMAC1Q96GE9 116 aa6.33□□□□□ -1.4
CHRNA1-201ENST00000261007 MEGF8Q7Z7M0 2845 aa6.33□□□□□ -1.4
CHRNA1-201ENST00000261007 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
CHRNA1-201ENST00000261007 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
CHRNA1-201ENST00000261007 ALMS1Q8TCU4 4167 aa6.31□□□□□ -1.4
CHRNA1-201ENST00000261007 DNAH6Q9C0G6 4158 aa6.3□□□□□ -1.4
CHRNA1-201ENST00000261007 DNAH17Q9UFH2 4485 aa6.29□□□□□ -1.4
CHRNA1-201ENST00000261007 A0A1B0GU69 56 aa6.29□□□□□ -1.4
CHRNA1-201ENST00000261007 KRTAP10-1P60331 282 aa6.28□□□□□ -1.4
CHRNA1-201ENST00000261007 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
CHRNA1-201ENST00000261007 SRRM2Q9UQ35 2752 aaKnown RBP6.27□□□□□ -1.41
CHRNA1-201ENST00000261007 DNHD1Q96M86 4753 aa6.26□□□□□ -1.41
CHRNA1-201ENST00000261007 PRAC1Q96KF2 57 aa6.25□□□□□ -1.41
CHRNA1-201ENST00000261007 FBN3Q75N90 2809 aa6.24□□□□□ -1.41
CHRNA1-201ENST00000261007 UQCR11O14957 56 aa6.23□□□□□ -1.41
CHRNA1-201ENST00000261007 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
CHRNA1-201ENST00000261007 SPINK6Q6UWN8 80 aa6.23□□□□□ -1.41
CHRNA1-201ENST00000261007 KMT2AQ03164 3969 aa6.23□□□□□ -1.41
CHRNA1-201ENST00000261007 DNAH2Q9P225 4427 aa6.23□□□□□ -1.41
CHRNA1-201ENST00000261007 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
CHRNA1-201ENST00000261007 IGKV2-30P06310 120 aa6.22□□□□□ -1.41
CHRNA1-201ENST00000261007 HECTD4Q9Y4D8 3996 aa6.21□□□□□ -1.41
CHRNA1-201ENST00000261007 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
CHRNA1-201ENST00000261007 TGP01266 2768 aa6.18□□□□□ -1.42
CHRNA1-201ENST00000261007 KRTAP13-2Q52LG2 175 aa6.17□□□□□ -1.42
CHRNA1-201ENST00000261007 LORP23490 312 aaPredicted RBP6.16□□□□□ -1.42
CHRNA1-201ENST00000261007 KRTAP1-4P0C5Y4 121 aa6.15□□□□□ -1.42
CHRNA1-201ENST00000261007 RETNLBQ9BQ08 111 aa6.15□□□□□ -1.42
CHRNA1-201ENST00000261007 DNAH8Q96JB1 4490 aa6.15□□□□□ -1.43
CHRNA1-201ENST00000261007 SPINK1P00995 79 aa6.11□□□□□ -1.43
CHRNA1-201ENST00000261007 TYMSOSQ8TAI1 123 aa6.11□□□□□ -1.43
CHRNA1-201ENST00000261007 RPS29P62273 56 aaKnown RBP6.11□□□□□ -1.43
CHRNA1-201ENST00000261007 KRTAP16-1A8MUX0 517 aa6.1□□□□□ -1.43
CHRNA1-201ENST00000261007 FRAS1Q86XX4 4008 aa6.1□□□□□ -1.43
CHRNA1-201ENST00000261007 IGKV2D-30A0A075B6S6 120 aa6.09□□□□□ -1.43
CHRNA1-201ENST00000261007 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.43
CHRNA1-201ENST00000261007 DNAH11Q96DT5 4516 aa6.09□□□□□ -1.44
CHRNA1-201ENST00000261007 A0A1B0GVY2 172 aa6.08□□□□□ -1.44
CHRNA1-201ENST00000261007 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
CHRNA1-201ENST00000261007 LINC00304Q8N9R0 145 aa6.04□□□□□ -1.44
CHRNA1-201ENST00000261007 PKD1P98161 4303 aa6.03□□□□□ -1.44
CHRNA1-201ENST00000261007 H3BS24 57 aa6.03□□□□□ -1.44
CHRNA1-201ENST00000261007 FAT2Q9NYQ8 4349 aa6.03□□□□□ -1.44
CHRNA1-201ENST00000261007 HYDINQ4G0P3 5121 aa6.01□□□□□ -1.45
CHRNA1-201ENST00000261007 SMR3BP02814 79 aaPredicted RBP5.97□□□□□ -1.45
CHRNA1-201ENST00000261007 LRP1BQ9NZR2 4599 aa5.96□□□□□ -1.45
CHRNA1-201ENST00000261007 A8MUU9 505 aa5.96□□□□□ -1.46
CHRNA1-201ENST00000261007 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
CHRNA1-201ENST00000261007 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
CHRNA1-201ENST00000261007 H0YAA0 97 aa5.91□□□□□ -1.46
CHRNA1-201ENST00000261007 SACSQ9NZJ4 4579 aa5.91□□□□□ -1.46
CHRNA1-201ENST00000261007 Q8N1X5 172 aa5.9□□□□□ -1.46
CHRNA1-201ENST00000261007 VPS13BQ7Z7G8 4022 aa5.89□□□□□ -1.47
CHRNA1-201ENST00000261007 A0A1B0GU33 70 aa5.87□□□□□ -1.47
CHRNA1-201ENST00000261007 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
CHRNA1-201ENST00000261007 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
CHRNA1-201ENST00000261007 ROMO1P60602 79 aa5.84□□□□□ -1.48
CHRNA1-201ENST00000261007 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.48
CHRNA1-201ENST00000261007 K7ERS5 55 aa5.8□□□□□ -1.48
CHRNA1-201ENST00000261007 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
CHRNA1-201ENST00000261007 Q5VSD8 79 aa5.79□□□□□ -1.48
CHRNA1-201ENST00000261007 RYR2Q92736 4967 aa5.79□□□□□ -1.48
CHRNA1-201ENST00000261007 KRTAP10-8P60410 259 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms