RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 TRBV7-7A0A0K0K1E9 115 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 C1orf195Q5TG92 126 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 SMIM29Q86T20 159 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 LCE2AQ5TA79 106 aaPredicted RBP3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 WFDC13Q8IUB5 93 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 TYMSOSQ8TAI1 123 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 VPREB1P12018 145 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 SPRR1AP35321 89 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 Q6ZRU5 148 aa3.41□□□□□ -1.86
TOPBP1-201ENST00000260810 J3QL48 77 aa3.4□□□□□ -1.86
TOPBP1-201ENST00000260810 TMEM254Q8TBM7 123 aa3.39□□□□□ -1.87
TOPBP1-201ENST00000260810 IGLV1-50A0A075B6I6 118 aa3.39□□□□□ -1.87
TOPBP1-201ENST00000260810 IGLV5-37A0A075B6J1 123 aa3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A0U1RQV1 116 aa3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 CNBPP62633 177 aaKnown RBP3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 C7orf65Q6ZTY9 151 aa3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 LINC00208Q96KT6 92 aa3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 LINC00476Q8WZB0 136 aa3.38□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A087WSZ3 146 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 LINC00167Q96N53 147 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 FAM229BQ4G0N7 80 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 KCNQ1DNQ9H478 68 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 RBM12B-AS1Q9P1G2 102 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 A8MWP4 228 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 C1orf64Q8NEQ6 169 aa3.37□□□□□ -1.87
TOPBP1-201ENST00000260810 KRTAP13-2Q52LG2 175 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A096LNI7 61 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 OBSCN-AS1Q96MR7 158 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 SPINK1P00995 79 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 RPS28P62857 69 aaKnown RBP3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 HRCT1Q6UXD1 115 aa3.36□□□□□ -1.87
TOPBP1-201ENST00000260810 A8MUN3 132 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 IGLV6-57P01721 117 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 LINC00304Q8N9R0 145 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 PSORS1C2Q9UIG4 136 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A087WYN8 130 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A1B0GU69 56 aa3.35□□□□□ -1.87
TOPBP1-201ENST00000260810 ZNF861PO60384 105 aa3.34□□□□□ -1.87
TOPBP1-201ENST00000260810 MT-ATP8P03928 68 aa3.34□□□□□ -1.87
TOPBP1-201ENST00000260810 A0A087X002 238 aa3.34□□□□□ -1.87
TOPBP1-201ENST00000260810 Q96NJ1 140 aa3.34□□□□□ -1.88
TOPBP1-201ENST00000260810 MRPL34Q9BQ48 92 aaKnown RBP3.34□□□□□ -1.88
TOPBP1-201ENST00000260810 LCE6AA0A183 80 aa3.33□□□□□ -1.88
TOPBP1-201ENST00000260810 CCDC179H3BU77 68 aa3.33□□□□□ -1.88
TOPBP1-201ENST00000260810 SCXQ7RTU7 201 aa3.33□□□□□ -1.88
TOPBP1-201ENST00000260810 SPACA4Q8TDM5 124 aa3.33□□□□□ -1.88
TOPBP1-201ENST00000260810 Q6ZQT0 140 aa3.33□□□□□ -1.88
TOPBP1-201ENST00000260810 CYSTM1Q9H1C7 97 aa3.32□□□□□ -1.88
TOPBP1-201ENST00000260810 A0A087WTM6 91 aa3.31□□□□□ -1.88
TOPBP1-201ENST00000260810 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
TOPBP1-201ENST00000260810 FCGBPQ9Y6R7 5405 aaPredicted RBP3.31□□□□□ -1.88
TOPBP1-201ENST00000260810 MPLKIPQ8TAP9 179 aa3.3□□□□□ -1.88
TOPBP1-201ENST00000260810 DMBT1Q9UGM3 2413 aaPredicted RBP3.3□□□□□ -1.88
TOPBP1-201ENST00000260810 HRES1P13985 223 aa3.3□□□□□ -1.88
TOPBP1-201ENST00000260810 PRLHP81277 87 aa3.3□□□□□ -1.88
TOPBP1-201ENST00000260810 SPANXA2-OT1Q8N9U9 137 aa3.3□□□□□ -1.88
TOPBP1-201ENST00000260810 IGLV7-43P04211 117 aa3.29□□□□□ -1.88
TOPBP1-201ENST00000260810 RETNLBQ9BQ08 111 aa3.29□□□□□ -1.88
TOPBP1-201ENST00000260810 A0A1B0GVX0 72 aa3.29□□□□□ -1.88
TOPBP1-201ENST00000260810 NOTCH2NLQ7Z3S9 236 aa3.29□□□□□ -1.88
TOPBP1-201ENST00000260810 SNURFQ9Y675 71 aa3.29□□□□□ -1.88
TOPBP1-201ENST00000260810 LINC00528Q8N1L1 170 aa3.28□□□□□ -1.88
TOPBP1-201ENST00000260810 IGKV2D-30A0A075B6S6 120 aa3.28□□□□□ -1.88
TOPBP1-201ENST00000260810 IGKV2-30P06310 120 aa3.28□□□□□ -1.88
TOPBP1-201ENST00000260810 COX6B2Q6YFQ2 88 aa3.28□□□□□ -1.88
TOPBP1-201ENST00000260810 OXTP01178 125 aa3.28□□□□□ -1.88
TOPBP1-201ENST00000260810 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.89
TOPBP1-201ENST00000260810 PHF5AQ7RTV0 110 aaKnown RBP3.27□□□□□ -1.89
TOPBP1-201ENST00000260810 C8orf17Q9NRJ1 99 aa3.27□□□□□ -1.89
TOPBP1-201ENST00000260810 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
TOPBP1-201ENST00000260810 PRR15Q8IV56 129 aa3.27□□□□□ -1.89
TOPBP1-201ENST00000260810 K7EQZ3 153 aa3.26□□□□□ -1.89
TOPBP1-201ENST00000260810 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
TOPBP1-201ENST00000260810 UQCR11O14957 56 aa3.26□□□□□ -1.89
TOPBP1-201ENST00000260810 LINC00846Q9NV44 126 aa3.26□□□□□ -1.89
TOPBP1-201ENST00000260810 FP248Q71RG6 208 aaPredicted RBP3.26□□□□□ -1.89
TOPBP1-201ENST00000260810 SPRR4Q96PI1 79 aa3.25□□□□□ -1.89
TOPBP1-201ENST00000260810 PMAIP1Q13794 54 aa3.25□□□□□ -1.89
TOPBP1-201ENST00000260810 PCOTHQ58A44 107 aa3.25□□□□□ -1.89
TOPBP1-201ENST00000260810 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
TOPBP1-201ENST00000260810 Q8N377 158 aa3.24□□□□□ -1.89
TOPBP1-201ENST00000260810 KRTAP10-8P60410 259 aa3.24□□□□□ -1.89
TOPBP1-201ENST00000260810 SEC61BP60468 96 aaKnown RBP3.23□□□□□ -1.89
TOPBP1-201ENST00000260810 PRR4Q16378 134 aa3.23□□□□□ -1.89
TOPBP1-201ENST00000260810 ASB16-AS1Q495Z4 193 aa3.23□□□□□ -1.89
TOPBP1-201ENST00000260810 LORP23490 312 aaPredicted RBP3.23□□□□□ -1.89
TOPBP1-201ENST00000260810 RPS29P62273 56 aaKnown RBP3.22□□□□□ -1.89
TOPBP1-201ENST00000260810 CRIPTQ9P021 101 aa3.22□□□□□ -1.89
TOPBP1-201ENST00000260810 PLAC8Q9NZF1 115 aa3.22□□□□□ -1.89
TOPBP1-201ENST00000260810 MDN1Q9NU22 5596 aa3.22□□□□□ -1.89
TOPBP1-201ENST00000260810 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.89
TOPBP1-201ENST00000260810 IGFL1Q6UW32 110 aa3.21□□□□□ -1.9
TOPBP1-201ENST00000260810 LINC00483Q53H64 154 aa3.21□□□□□ -1.9
TOPBP1-201ENST00000260810 IGLV5-48A0A075B6I7 105 aa3.2□□□□□ -1.9
TOPBP1-201ENST00000260810 Q8N1X5 172 aa3.2□□□□□ -1.9
TOPBP1-201ENST00000260810 KLKP1Q107X0 134 aa3.2□□□□□ -1.9
TOPBP1-201ENST00000260810 SPRR1BP22528 89 aa3.2□□□□□ -1.9
TOPBP1-201ENST00000260810 IGLV8-61A0A075B6I0 122 aa3.19□□□□□ -1.9
TOPBP1-201ENST00000260810 COA5Q86WW8 74 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms