RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 MIR22HGQ0VDD5 57 aa7.89□□□□□ -1.15
TUBGCP4-201ENST00000260383 KRTAP1-5Q9BYS1 174 aa7.89□□□□□ -1.15
TUBGCP4-201ENST00000260383 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
TUBGCP4-201ENST00000260383 NOTCH1P46531 2555 aa7.87□□□□□ -1.15
TUBGCP4-201ENST00000260383 RETNLBQ9BQ08 111 aa7.87□□□□□ -1.15
TUBGCP4-201ENST00000260383 DMAC1Q96GE9 116 aa7.85□□□□□ -1.15
TUBGCP4-201ENST00000260383 PANO1I0J062 215 aa7.85□□□□□ -1.15
TUBGCP4-201ENST00000260383 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
TUBGCP4-201ENST00000260383 UQCR11O14957 56 aa7.84□□□□□ -1.15
TUBGCP4-201ENST00000260383 ANAPC11Q9NYG5 84 aa7.83□□□□□ -1.16
TUBGCP4-201ENST00000260383 SPINK6Q6UWN8 80 aa7.83□□□□□ -1.16
TUBGCP4-201ENST00000260383 CMYA5Q8N3K9 4069 aa7.83□□□□□ -1.16
TUBGCP4-201ENST00000260383 FRAS1Q86XX4 4008 aa7.8□□□□□ -1.16
TUBGCP4-201ENST00000260383 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
TUBGCP4-201ENST00000260383 WWC2-AS2Q96NR7 200 aa7.78□□□□□ -1.16
TUBGCP4-201ENST00000260383 ZNF861PO60384 105 aa7.77□□□□□ -1.17
TUBGCP4-201ENST00000260383 HUWE1Q7Z6Z7 4374 aaKnown RBP7.77□□□□□ -1.17
TUBGCP4-201ENST00000260383 LINC00483Q53H64 154 aa7.77□□□□□ -1.17
TUBGCP4-201ENST00000260383 DNAH7Q8WXX0 4024 aa7.74□□□□□ -1.17
TUBGCP4-201ENST00000260383 DNAH3Q8TD57 4116 aa7.74□□□□□ -1.17
TUBGCP4-201ENST00000260383 C1orf134Q5TEV5 83 aa7.72□□□□□ -1.17
TUBGCP4-201ENST00000260383 MEGF8Q7Z7M0 2845 aa7.71□□□□□ -1.17
TUBGCP4-201ENST00000260383 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.69□□□□□ -1.18
TUBGCP4-201ENST00000260383 STAB2Q8WWQ8 2551 aa7.68□□□□□ -1.18
TUBGCP4-201ENST00000260383 IGKV2-30P06310 120 aa7.67□□□□□ -1.18
TUBGCP4-201ENST00000260383 C14orf177Q52M58 125 aa7.67□□□□□ -1.18
TUBGCP4-201ENST00000260383 MGAM2Q2M2H8 2515 aa7.66□□□□□ -1.18
TUBGCP4-201ENST00000260383 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
TUBGCP4-201ENST00000260383 DNAH17Q9UFH2 4485 aa7.65□□□□□ -1.19
TUBGCP4-201ENST00000260383 ZNF706Q9Y5V0 76 aaPredicted RBP7.64□□□□□ -1.19
TUBGCP4-201ENST00000260383 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
TUBGCP4-201ENST00000260383 PSORS1C2Q9UIG4 136 aa7.63□□□□□ -1.19
TUBGCP4-201ENST00000260383 CIRBP-AS1Q8TBR5 109 aa7.63□□□□□ -1.19
TUBGCP4-201ENST00000260383 SPACA4Q8TDM5 124 aa7.62□□□□□ -1.19
TUBGCP4-201ENST00000260383 UBE2DNLQ8IWF7 75 aa7.61□□□□□ -1.19
TUBGCP4-201ENST00000260383 ROMO1P60602 79 aa7.61□□□□□ -1.19
TUBGCP4-201ENST00000260383 KRTAP25-1Q3LHN0 102 aa7.6□□□□□ -1.19
TUBGCP4-201ENST00000260383 SPINK1P00995 79 aa7.59□□□□□ -1.19
TUBGCP4-201ENST00000260383 IGKV2D-30A0A075B6S6 120 aa7.59□□□□□ -1.19
TUBGCP4-201ENST00000260383 HECTD4Q9Y4D8 3996 aa7.58□□□□□ -1.2
TUBGCP4-201ENST00000260383 PLECQ15149 4684 aaKnown RBP7.58□□□□□ -1.2
TUBGCP4-201ENST00000260383 TGP01266 2768 aa7.58□□□□□ -1.2
TUBGCP4-201ENST00000260383 IGLV5-52A0A0A0MRZ9 124 aa7.57□□□□□ -1.2
TUBGCP4-201ENST00000260383 A8MUU9 505 aa7.56□□□□□ -1.2
TUBGCP4-201ENST00000260383 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
TUBGCP4-201ENST00000260383 LINC00304Q8N9R0 145 aa7.55□□□□□ -1.2
TUBGCP4-201ENST00000260383 H0YAA0 97 aa7.54□□□□□ -1.2
TUBGCP4-201ENST00000260383 VPS13DQ5THJ4 4388 aa7.53□□□□□ -1.2
TUBGCP4-201ENST00000260383 Q6ZSA8 131 aa7.53□□□□□ -1.2
TUBGCP4-201ENST00000260383 Q6ZRN7 208 aaPredicted RBP7.51□□□□□ -1.21
TUBGCP4-201ENST00000260383 APLNQ9ULZ1 77 aa7.51□□□□□ -1.21
TUBGCP4-201ENST00000260383 KRTAP16-1A8MUX0 517 aa7.5□□□□□ -1.21
TUBGCP4-201ENST00000260383 CRIPTQ9P021 101 aa7.5□□□□□ -1.21
TUBGCP4-201ENST00000260383 DYNC2H1Q8NCM8 4307 aaKnown RBP7.48□□□□□ -1.21
TUBGCP4-201ENST00000260383 Q8N1X5 172 aa7.48□□□□□ -1.21
TUBGCP4-201ENST00000260383 NBDYA0A0U1RRE5 68 aa7.47□□□□□ -1.21
TUBGCP4-201ENST00000260383 LY6G6CO95867 125 aa7.47□□□□□ -1.21
TUBGCP4-201ENST00000260383 P0C880 135 aa7.47□□□□□ -1.21
TUBGCP4-201ENST00000260383 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
TUBGCP4-201ENST00000260383 FBN3Q75N90 2809 aa7.42□□□□□ -1.22
TUBGCP4-201ENST00000260383 SSBP3-AS1Q7Z2R9 100 aa7.42□□□□□ -1.22
TUBGCP4-201ENST00000260383 DNAH2Q9P225 4427 aa7.41□□□□□ -1.22
TUBGCP4-201ENST00000260383 KMT2AQ03164 3969 aa7.39□□□□□ -1.23
TUBGCP4-201ENST00000260383 A0A087WTM6 91 aa7.39□□□□□ -1.23
TUBGCP4-201ENST00000260383 A0A1B0GU33 70 aa7.37□□□□□ -1.23
TUBGCP4-201ENST00000260383 KRTAP13-2Q52LG2 175 aa7.34□□□□□ -1.23
TUBGCP4-201ENST00000260383 DNAH11Q96DT5 4516 aa7.34□□□□□ -1.23
TUBGCP4-201ENST00000260383 DNHD1Q96M86 4753 aa7.34□□□□□ -1.24
TUBGCP4-201ENST00000260383 STARD9Q9P2P6 4700 aa7.33□□□□□ -1.24
TUBGCP4-201ENST00000260383 DNAH6Q9C0G6 4158 aa7.32□□□□□ -1.24
TUBGCP4-201ENST00000260383 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
TUBGCP4-201ENST00000260383 PRKDCP78527 4128 aaKnown RBP7.31□□□□□ -1.24
TUBGCP4-201ENST00000260383 LRP1BQ9NZR2 4599 aa7.25□□□□□ -1.25
TUBGCP4-201ENST00000260383 KRTAP3-1Q9BYR8 98 aa7.23□□□□□ -1.25
TUBGCP4-201ENST00000260383 DNAH5Q8TE73 4624 aa7.21□□□□□ -1.26
TUBGCP4-201ENST00000260383 K7ERS5 55 aa7.19□□□□□ -1.26
TUBGCP4-201ENST00000260383 SPINT4Q6UDR6 99 aa7.18□□□□□ -1.26
TUBGCP4-201ENST00000260383 COX6B2Q6YFQ2 88 aa7.18□□□□□ -1.26
TUBGCP4-201ENST00000260383 TPRXLQ17RH7 258 aa7.17□□□□□ -1.26
TUBGCP4-201ENST00000260383 NUPR2A6NF83 97 aa7.14□□□□□ -1.27
TUBGCP4-201ENST00000260383 NDUFAF8A1L188 74 aa7.14□□□□□ -1.27
TUBGCP4-201ENST00000260383 KRTAP1-4P0C5Y4 121 aa7.13□□□□□ -1.27
TUBGCP4-201ENST00000260383 DMBT1Q9UGM3 2413 aaPredicted RBP7.11□□□□□ -1.27
TUBGCP4-201ENST00000260383 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
TUBGCP4-201ENST00000260383 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
TUBGCP4-201ENST00000260383 KRTAP21-3Q3LHN1 58 aa7.08□□□□□ -1.28
TUBGCP4-201ENST00000260383 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
TUBGCP4-201ENST00000260383 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
TUBGCP4-201ENST00000260383 KRTAP10-2P60368 255 aa7.05□□□□□ -1.28
TUBGCP4-201ENST00000260383 RPL37P61927 97 aaKnown RBP7.04□□□□□ -1.28
TUBGCP4-201ENST00000260383 FAT2Q9NYQ8 4349 aa7.04□□□□□ -1.28
TUBGCP4-201ENST00000260383 C9orf92A6NGG3 77 aa7.04□□□□□ -1.28
TUBGCP4-201ENST00000260383 A0A0D9SG42 100 aa7.03□□□□□ -1.28
TUBGCP4-201ENST00000260383 KRTAP13-4Q3LI77 160 aa7.03□□□□□ -1.28
TUBGCP4-201ENST00000260383 PKD1P98161 4303 aa6.98□□□□□ -1.29
TUBGCP4-201ENST00000260383 KRTAP10-6P60371 365 aaPredicted RBP6.98□□□□□ -1.29
TUBGCP4-201ENST00000260383 KRTAP10-1P60331 282 aa6.94□□□□□ -1.3
TUBGCP4-201ENST00000260383 KRTAP3-2Q9BYR7 98 aa6.89□□□□□ -1.31
TUBGCP4-201ENST00000260383 KRTAP3-3Q9BYR6 98 aa6.87□□□□□ -1.31
TUBGCP4-201ENST00000260383 HYDINQ4G0P3 5121 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms