RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.31
TROAP-201ENST00000257909 WWC2-AS2Q96NR7 200 aa6.84□□□□□ -1.31
TROAP-201ENST00000257909 PLA2G1BP04054 148 aaKnown RBP6.84□□□□□ -1.31
TROAP-201ENST00000257909 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
TROAP-201ENST00000257909 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
TROAP-201ENST00000257909 K7EIL1 84 aa6.83□□□□□ -1.32
TROAP-201ENST00000257909 Q5W150 140 aa6.83□□□□□ -1.32
TROAP-201ENST00000257909 PANO1I0J062 215 aa6.82□□□□□ -1.32
TROAP-201ENST00000257909 ALMS1Q8TCU4 4167 aa6.82□□□□□ -1.32
TROAP-201ENST00000257909 DYNC2H1Q8NCM8 4307 aaKnown RBP6.82□□□□□ -1.32
TROAP-201ENST00000257909 DMAC1Q96GE9 116 aa6.81□□□□□ -1.32
TROAP-201ENST00000257909 A0A1B0GU69 56 aa6.8□□□□□ -1.32
TROAP-201ENST00000257909 SPACA4Q8TDM5 124 aa6.79□□□□□ -1.32
TROAP-201ENST00000257909 SPATA8Q6RVD6 105 aa6.79□□□□□ -1.32
TROAP-201ENST00000257909 PLECQ15149 4684 aaKnown RBP6.78□□□□□ -1.32
TROAP-201ENST00000257909 ADM2Q7Z4H4 148 aa6.78□□□□□ -1.32
TROAP-201ENST00000257909 APLNQ9ULZ1 77 aa6.77□□□□□ -1.33
TROAP-201ENST00000257909 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
TROAP-201ENST00000257909 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.77□□□□□ -1.33
TROAP-201ENST00000257909 SPINK6Q6UWN8 80 aa6.76□□□□□ -1.33
TROAP-201ENST00000257909 RTL8CO15255 209 aa6.76□□□□□ -1.33
TROAP-201ENST00000257909 IGLV5-52A0A0A0MRZ9 124 aa6.74□□□□□ -1.33
TROAP-201ENST00000257909 UQCR11O14957 56 aa6.74□□□□□ -1.33
TROAP-201ENST00000257909 ZNF861PO60384 105 aa6.74□□□□□ -1.33
TROAP-201ENST00000257909 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
TROAP-201ENST00000257909 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
TROAP-201ENST00000257909 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
TROAP-201ENST00000257909 FAM229AH3BQW9 127 aa6.73□□□□□ -1.33
TROAP-201ENST00000257909 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
TROAP-201ENST00000257909 Q6ZRN7 208 aaPredicted RBP6.72□□□□□ -1.33
TROAP-201ENST00000257909 DNAH8Q96JB1 4490 aa6.71□□□□□ -1.34
TROAP-201ENST00000257909 J3QL48 77 aa6.69□□□□□ -1.34
TROAP-201ENST00000257909 IGKV2-30P06310 120 aa6.69□□□□□ -1.34
TROAP-201ENST00000257909 MGAM2Q2M2H8 2515 aa6.68□□□□□ -1.34
TROAP-201ENST00000257909 CIRBP-AS1Q8TBR5 109 aa6.67□□□□□ -1.34
TROAP-201ENST00000257909 FRAS1Q86XX4 4008 aa6.67□□□□□ -1.34
TROAP-201ENST00000257909 VPS13DQ5THJ4 4388 aa6.67□□□□□ -1.34
TROAP-201ENST00000257909 RETNLBQ9BQ08 111 aa6.67□□□□□ -1.34
TROAP-201ENST00000257909 HECTD4Q9Y4D8 3996 aa6.66□□□□□ -1.34
TROAP-201ENST00000257909 SSBP3-AS1Q7Z2R9 100 aa6.65□□□□□ -1.35
TROAP-201ENST00000257909 STARD9Q9P2P6 4700 aa6.64□□□□□ -1.35
TROAP-201ENST00000257909 DNAH17Q9UFH2 4485 aa6.64□□□□□ -1.35
TROAP-201ENST00000257909 A0A087WTM6 91 aa6.62□□□□□ -1.35
TROAP-201ENST00000257909 DNAH2Q9P225 4427 aa6.61□□□□□ -1.35
TROAP-201ENST00000257909 IGLV7-43P04211 117 aa6.6□□□□□ -1.35
TROAP-201ENST00000257909 CSAG1Q6PB30 78 aa6.59□□□□□ -1.35
TROAP-201ENST00000257909 NUPR2A6NF83 97 aa6.57□□□□□ -1.36
TROAP-201ENST00000257909 PRKDCP78527 4128 aaKnown RBP6.57□□□□□ -1.36
TROAP-201ENST00000257909 KRTAP16-1A8MUX0 517 aa6.55□□□□□ -1.36
TROAP-201ENST00000257909 KMT2AQ03164 3969 aa6.55□□□□□ -1.36
TROAP-201ENST00000257909 IGKV2D-30A0A075B6S6 120 aa6.55□□□□□ -1.36
TROAP-201ENST00000257909 FBN3Q75N90 2809 aa6.54□□□□□ -1.36
TROAP-201ENST00000257909 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
TROAP-201ENST00000257909 DNAH11Q96DT5 4516 aa6.48□□□□□ -1.37
TROAP-201ENST00000257909 LY6G6CO95867 125 aa6.47□□□□□ -1.37
TROAP-201ENST00000257909 KRTAP3-3Q9BYR6 98 aa6.47□□□□□ -1.37
TROAP-201ENST00000257909 KRTAP3-2Q9BYR7 98 aa6.47□□□□□ -1.37
TROAP-201ENST00000257909 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
TROAP-201ENST00000257909 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
TROAP-201ENST00000257909 SPINK1P00995 79 aa6.45□□□□□ -1.38
TROAP-201ENST00000257909 KRTAP13-2Q52LG2 175 aa6.45□□□□□ -1.38
TROAP-201ENST00000257909 ROMO1P60602 79 aa6.43□□□□□ -1.38
TROAP-201ENST00000257909 A8MUU9 505 aa6.43□□□□□ -1.38
TROAP-201ENST00000257909 LCE2DQ5TA82 110 aaPredicted RBP6.43□□□□□ -1.38
TROAP-201ENST00000257909 MEGF8Q7Z7M0 2845 aa6.41□□□□□ -1.38
TROAP-201ENST00000257909 Q6ZSA8 131 aa6.4□□□□□ -1.38
TROAP-201ENST00000257909 H0YAA0 97 aa6.4□□□□□ -1.39
TROAP-201ENST00000257909 KRTAP25-1Q3LHN0 102 aa6.4□□□□□ -1.39
TROAP-201ENST00000257909 Q8N1X5 172 aa6.39□□□□□ -1.39
TROAP-201ENST00000257909 TGP01266 2768 aa6.38□□□□□ -1.39
TROAP-201ENST00000257909 LINC00304Q8N9R0 145 aa6.37□□□□□ -1.39
TROAP-201ENST00000257909 A0A1B0GU33 70 aa6.34□□□□□ -1.39
TROAP-201ENST00000257909 LRP1BQ9NZR2 4599 aa6.34□□□□□ -1.39
TROAP-201ENST00000257909 KRTAP1-4P0C5Y4 121 aa6.32□□□□□ -1.4
TROAP-201ENST00000257909 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
TROAP-201ENST00000257909 PKD1P98161 4303 aa6.31□□□□□ -1.4
TROAP-201ENST00000257909 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
TROAP-201ENST00000257909 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
TROAP-201ENST00000257909 P0C880 135 aa6.27□□□□□ -1.41
TROAP-201ENST00000257909 K7ERS5 55 aa6.27□□□□□ -1.41
TROAP-201ENST00000257909 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
TROAP-201ENST00000257909 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
TROAP-201ENST00000257909 HYDINQ4G0P3 5121 aa6.26□□□□□ -1.41
TROAP-201ENST00000257909 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
TROAP-201ENST00000257909 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
TROAP-201ENST00000257909 DNHD1Q96M86 4753 aa6.23□□□□□ -1.41
TROAP-201ENST00000257909 KRTAP3-1Q9BYR8 98 aa6.21□□□□□ -1.42
TROAP-201ENST00000257909 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
TROAP-201ENST00000257909 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
TROAP-201ENST00000257909 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
TROAP-201ENST00000257909 KRTAP21-3Q3LHN1 58 aa6.15□□□□□ -1.42
TROAP-201ENST00000257909 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
TROAP-201ENST00000257909 CRIPTQ9P021 101 aa6.14□□□□□ -1.43
TROAP-201ENST00000257909 FLG2Q5D862 2391 aaPredicted RBP6.12□□□□□ -1.43
TROAP-201ENST00000257909 C9orf92A6NGG3 77 aa6.11□□□□□ -1.43
TROAP-201ENST00000257909 PKHD1P08F94 4074 aa6.08□□□□□ -1.44
TROAP-201ENST00000257909 RPL37P61927 97 aaKnown RBP6.08□□□□□ -1.44
TROAP-201ENST00000257909 PKHD1L1Q86WI1 4243 aa6.03□□□□□ -1.44
TROAP-201ENST00000257909 NDUFAF8A1L188 74 aa6.02□□□□□ -1.45
TROAP-201ENST00000257909 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms