RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 REG3GQ6UW15 175 aa7.33□□□□□ -1.24
CCNA1-201ENST00000255465 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
CCNA1-201ENST00000255465 UQCR11O14957 56 aa7.32□□□□□ -1.24
CCNA1-201ENST00000255465 MIR22HGQ0VDD5 57 aa7.32□□□□□ -1.24
CCNA1-201ENST00000255465 CAMK2N2Q96S95 79 aa7.3□□□□□ -1.24
CCNA1-201ENST00000255465 KRTAP3-3Q9BYR6 98 aa7.3□□□□□ -1.24
CCNA1-201ENST00000255465 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
CCNA1-201ENST00000255465 A0A0A0MQY5 61 aa7.29□□□□□ -1.24
CCNA1-201ENST00000255465 IGKV2-24A0A0C4DH68 120 aa7.29□□□□□ -1.24
CCNA1-201ENST00000255465 PCOTHQ58A44 107 aa7.28□□□□□ -1.24
CCNA1-201ENST00000255465 A0A1B0GU69 56 aa7.28□□□□□ -1.24
CCNA1-201ENST00000255465 ACYP2P14621 99 aa7.28□□□□□ -1.24
CCNA1-201ENST00000255465 IGFL1Q6UW32 110 aa7.28□□□□□ -1.24
CCNA1-201ENST00000255465 MMP24-AS1A0A0U1RRL7 71 aa7.27□□□□□ -1.25
CCNA1-201ENST00000255465 EPPK1P58107 5090 aaKnown RBP7.27□□□□□ -1.25
CCNA1-201ENST00000255465 ZNF861PO60384 105 aa7.26□□□□□ -1.25
CCNA1-201ENST00000255465 LELP1Q5T871 98 aa7.26□□□□□ -1.25
CCNA1-201ENST00000255465 A0A087WSZ3 146 aa7.25□□□□□ -1.25
CCNA1-201ENST00000255465 NBDYA0A0U1RRE5 68 aa7.25□□□□□ -1.25
CCNA1-201ENST00000255465 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
CCNA1-201ENST00000255465 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
CCNA1-201ENST00000255465 KRTAP1-5Q9BYS1 174 aa7.23□□□□□ -1.25
CCNA1-201ENST00000255465 FRAS1Q86XX4 4008 aa7.22□□□□□ -1.25
CCNA1-201ENST00000255465 RPL37AP61513 92 aaKnown RBP7.22□□□□□ -1.25
CCNA1-201ENST00000255465 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
CCNA1-201ENST00000255465 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.26
CCNA1-201ENST00000255465 DNAH10Q8IVF4 4471 aa7.2□□□□□ -1.26
CCNA1-201ENST00000255465 DNAH2Q9P225 4427 aa7.18□□□□□ -1.26
CCNA1-201ENST00000255465 LINC01556Q5JQF7 62 aa7.18□□□□□ -1.26
CCNA1-201ENST00000255465 DMAC1Q96GE9 116 aa7.15□□□□□ -1.27
CCNA1-201ENST00000255465 FAT2Q9NYQ8 4349 aa7.14□□□□□ -1.27
CCNA1-201ENST00000255465 DNAH17Q9UFH2 4485 aa7.14□□□□□ -1.27
CCNA1-201ENST00000255465 KRTAP26-1Q6PEX3 210 aa7.13□□□□□ -1.27
CCNA1-201ENST00000255465 Q6ZRN7 208 aaPredicted RBP7.13□□□□□ -1.27
CCNA1-201ENST00000255465 C15orf56Q8N910 161 aa7.13□□□□□ -1.27
CCNA1-201ENST00000255465 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
CCNA1-201ENST00000255465 SPRR1BP22528 89 aa7.11□□□□□ -1.27
CCNA1-201ENST00000255465 FAM168BA1KXE4 195 aa7.11□□□□□ -1.27
CCNA1-201ENST00000255465 C8orf17Q9NRJ1 99 aa7.11□□□□□ -1.27
CCNA1-201ENST00000255465 PKD1P98161 4303 aa7.08□□□□□ -1.28
CCNA1-201ENST00000255465 HECTD4Q9Y4D8 3996 aa7.08□□□□□ -1.28
CCNA1-201ENST00000255465 LINC00483Q53H64 154 aa7.08□□□□□ -1.28
CCNA1-201ENST00000255465 P0C880 135 aa7.07□□□□□ -1.28
CCNA1-201ENST00000255465 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
CCNA1-201ENST00000255465 MRPL34Q9BQ48 92 aaKnown RBP7.07□□□□□ -1.28
CCNA1-201ENST00000255465 IGLV5-52A0A0A0MRZ9 124 aa7.06□□□□□ -1.28
CCNA1-201ENST00000255465 A0A087WTM6 91 aa7.05□□□□□ -1.28
CCNA1-201ENST00000255465 PKHD1P08F94 4074 aa7.05□□□□□ -1.28
CCNA1-201ENST00000255465 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
CCNA1-201ENST00000255465 A8MUU9 505 aa7.03□□□□□ -1.28
CCNA1-201ENST00000255465 DNAH11Q96DT5 4516 aa7.03□□□□□ -1.28
CCNA1-201ENST00000255465 KRTAP16-1A8MUX0 517 aa7.02□□□□□ -1.28
CCNA1-201ENST00000255465 KRTAP10-2P60368 255 aa7.02□□□□□ -1.28
CCNA1-201ENST00000255465 HERC2O95714 4834 aa7.01□□□□□ -1.29
CCNA1-201ENST00000255465 A0A1B0GVX0 72 aa7□□□□□ -1.29
CCNA1-201ENST00000255465 KRTAP13-3Q3SY46 172 aa7□□□□□ -1.29
CCNA1-201ENST00000255465 A0A0G2JQZ4 141 aa6.99□□□□□ -1.29
CCNA1-201ENST00000255465 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
CCNA1-201ENST00000255465 RYR1P21817 5038 aa6.98□□□□□ -1.29
CCNA1-201ENST00000255465 Q96NJ1 140 aa6.97□□□□□ -1.29
CCNA1-201ENST00000255465 DYNC1H1Q14204 4646 aaKnown RBP6.97□□□□□ -1.29
CCNA1-201ENST00000255465 CDK2AP2O75956 126 aa6.95□□□□□ -1.3
CCNA1-201ENST00000255465 DNAH5Q8TE73 4624 aa6.95□□□□□ -1.3
CCNA1-201ENST00000255465 C14orf177Q52M58 125 aa6.94□□□□□ -1.3
CCNA1-201ENST00000255465 KRTAP7-1Q8IUC3 87 aa6.94□□□□□ -1.3
CCNA1-201ENST00000255465 LINC00304Q8N9R0 145 aa6.93□□□□□ -1.3
CCNA1-201ENST00000255465 C20orf166-AS1Q96NR2 134 aa6.92□□□□□ -1.3
CCNA1-201ENST00000255465 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
CCNA1-201ENST00000255465 KRTAP10-1P60331 282 aa6.92□□□□□ -1.3
CCNA1-201ENST00000255465 KIAA1109Q2LD37 5005 aa6.88□□□□□ -1.31
CCNA1-201ENST00000255465 Q5W150 140 aa6.87□□□□□ -1.31
CCNA1-201ENST00000255465 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
CCNA1-201ENST00000255465 ANAPC11Q9NYG5 84 aa6.85□□□□□ -1.31
CCNA1-201ENST00000255465 HSPG2P98160 4391 aa6.84□□□□□ -1.31
CCNA1-201ENST00000255465 PRLHP81277 87 aa6.84□□□□□ -1.31
CCNA1-201ENST00000255465 Q6ZSA8 131 aa6.83□□□□□ -1.32
CCNA1-201ENST00000255465 FAM229AH3BQW9 127 aa6.83□□□□□ -1.32
CCNA1-201ENST00000255465 K7ERS5 55 aa6.82□□□□□ -1.32
CCNA1-201ENST00000255465 DNAH8Q96JB1 4490 aa6.82□□□□□ -1.32
CCNA1-201ENST00000255465 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
CCNA1-201ENST00000255465 IGKV2-30P06310 120 aa6.81□□□□□ -1.32
CCNA1-201ENST00000255465 NDUFAF8A1L188 74 aa6.79□□□□□ -1.32
CCNA1-201ENST00000255465 PANO1I0J062 215 aa6.79□□□□□ -1.32
CCNA1-201ENST00000255465 CHTF8P0CG12 524 aa6.79□□□□□ -1.32
CCNA1-201ENST00000255465 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
CCNA1-201ENST00000255465 SPINT4Q6UDR6 99 aa6.78□□□□□ -1.32
CCNA1-201ENST00000255465 Q8N1X5 172 aa6.78□□□□□ -1.32
CCNA1-201ENST00000255465 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.78□□□□□ -1.32
CCNA1-201ENST00000255465 SMR3BP02814 79 aaPredicted RBP6.77□□□□□ -1.33
CCNA1-201ENST00000255465 CIRBP-AS1Q8TBR5 109 aa6.77□□□□□ -1.33
CCNA1-201ENST00000255465 H0YAA0 97 aa6.75□□□□□ -1.33
CCNA1-201ENST00000255465 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
CCNA1-201ENST00000255465 A0A096LNI7 61 aa6.75□□□□□ -1.33
CCNA1-201ENST00000255465 SPACA4Q8TDM5 124 aa6.74□□□□□ -1.33
CCNA1-201ENST00000255465 IGKV2D-30A0A075B6S6 120 aa6.73□□□□□ -1.33
CCNA1-201ENST00000255465 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
CCNA1-201ENST00000255465 Q5VSD8 79 aa6.72□□□□□ -1.33
CCNA1-201ENST00000255465 LUZP6Q538Z0 58 aa6.7□□□□□ -1.34
CCNA1-201ENST00000255465 SSBP3-AS1Q7Z2R9 100 aa6.7□□□□□ -1.34
CCNA1-201ENST00000255465 FAT1Q14517 4588 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms