RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CYP4F30PQ9H0H9 118 aa9.47□□□□□ -0.89
LRFN1-201ENST00000248668 CASC2Q6XLA1 102 aa9.46□□□□□ -0.89
LRFN1-201ENST00000248668 A8MWP4 228 aa9.46□□□□□ -0.9
LRFN1-201ENST00000248668 NDUFS5O43920 106 aa9.45□□□□□ -0.9
LRFN1-201ENST00000248668 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
LRFN1-201ENST00000248668 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
LRFN1-201ENST00000248668 LINC00483Q53H64 154 aa9.44□□□□□ -0.9
LRFN1-201ENST00000248668 ZNF706Q9Y5V0 76 aaPredicted RBP9.44□□□□□ -0.9
LRFN1-201ENST00000248668 SPAG11AQ6PDA7 123 aa9.43□□□□□ -0.9
LRFN1-201ENST00000248668 ATP11AUNQ6ZP68 121 aa9.43□□□□□ -0.9
LRFN1-201ENST00000248668 ALMS1Q8TCU4 4167 aa9.42□□□□□ -0.9
LRFN1-201ENST00000248668 LIMD2Q9BT23 127 aa9.42□□□□□ -0.9
LRFN1-201ENST00000248668 IGLV7-43P04211 117 aa9.41□□□□□ -0.9
LRFN1-201ENST00000248668 KRTAP29-1A8MX34 341 aaPredicted RBP9.41□□□□□ -0.9
LRFN1-201ENST00000248668 C7orf65Q6ZTY9 151 aa9.4□□□□□ -0.9
LRFN1-201ENST00000248668 Q96NJ1 140 aa9.4□□□□□ -0.9
LRFN1-201ENST00000248668 NDUFB1O75438 58 aa9.4□□□□□ -0.91
LRFN1-201ENST00000248668 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
LRFN1-201ENST00000248668 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
LRFN1-201ENST00000248668 SPINK6Q6UWN8 80 aa9.38□□□□□ -0.91
LRFN1-201ENST00000248668 IGHV6-1A0A0B4J1U7 121 aa9.38□□□□□ -0.91
LRFN1-201ENST00000248668 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
LRFN1-201ENST00000248668 A6NN06 94 aa9.37□□□□□ -0.91
LRFN1-201ENST00000248668 FAT2Q9NYQ8 4349 aa9.36□□□□□ -0.91
LRFN1-201ENST00000248668 MMP24-AS1A0A0U1RRL7 71 aa9.36□□□□□ -0.91
LRFN1-201ENST00000248668 H0Y9P7 68 aa9.36□□□□□ -0.91
LRFN1-201ENST00000248668 PKD1P98161 4303 aa9.34□□□□□ -0.91
LRFN1-201ENST00000248668 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
LRFN1-201ENST00000248668 COA5Q86WW8 74 aa9.32□□□□□ -0.92
LRFN1-201ENST00000248668 A0A087X002 238 aa9.31□□□□□ -0.92
LRFN1-201ENST00000248668 CDK2AP2O75956 126 aa9.31□□□□□ -0.92
LRFN1-201ENST00000248668 NOTCH2NLQ7Z3S9 236 aa9.31□□□□□ -0.92
LRFN1-201ENST00000248668 SPINK7P58062 85 aa9.29□□□□□ -0.92
LRFN1-201ENST00000248668 LOC101927531A0A1B0GV80 90 aa9.29□□□□□ -0.92
LRFN1-201ENST00000248668 C8orf17Q9NRJ1 99 aa9.29□□□□□ -0.92
LRFN1-201ENST00000248668 PKHD1P08F94 4074 aa9.29□□□□□ -0.92
LRFN1-201ENST00000248668 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
LRFN1-201ENST00000248668 CDC42SE1Q9NRR8 79 aa9.28□□□□□ -0.92
LRFN1-201ENST00000248668 LINC00313P59037 77 aa9.28□□□□□ -0.92
LRFN1-201ENST00000248668 A0A1B0GVX0 72 aa9.26□□□□□ -0.93
LRFN1-201ENST00000248668 Q75L30 129 aa9.26□□□□□ -0.93
LRFN1-201ENST00000248668 SACSQ9NZJ4 4579 aa9.22□□□□□ -0.93
LRFN1-201ENST00000248668 Q6ZSA8 131 aa9.22□□□□□ -0.93
LRFN1-201ENST00000248668 SPANXA2-OT1Q8N9U9 137 aa9.21□□□□□ -0.94
LRFN1-201ENST00000248668 FLG2Q5D862 2391 aaPredicted RBP9.2□□□□□ -0.94
LRFN1-201ENST00000248668 KRTAP13-2Q52LG2 175 aa9.2□□□□□ -0.94
LRFN1-201ENST00000248668 PRR26Q8N8Z3 221 aa9.2□□□□□ -0.94
LRFN1-201ENST00000248668 MRPL34Q9BQ48 92 aaKnown RBP9.17□□□□□ -0.94
LRFN1-201ENST00000248668 SSBP3-AS1Q7Z2R9 100 aa9.16□□□□□ -0.94
LRFN1-201ENST00000248668 ASB16-AS1Q495Z4 193 aa9.16□□□□□ -0.94
LRFN1-201ENST00000248668 LINC01554Q52M75 96 aa9.16□□□□□ -0.94
LRFN1-201ENST00000248668 H3BPC8 53 aa9.14□□□□□ -0.95
LRFN1-201ENST00000248668 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
LRFN1-201ENST00000248668 RETNLBQ9BQ08 111 aa9.12□□□□□ -0.95
LRFN1-201ENST00000248668 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
LRFN1-201ENST00000248668 KRTAP1-4P0C5Y4 121 aa9.1□□□□□ -0.95
LRFN1-201ENST00000248668 KRTAP21-3Q3LHN1 58 aa9.1□□□□□ -0.95
LRFN1-201ENST00000248668 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
LRFN1-201ENST00000248668 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
LRFN1-201ENST00000248668 DYNC1H1Q14204 4646 aaKnown RBP9.09□□□□□ -0.95
LRFN1-201ENST00000248668 FAT1Q14517 4588 aa9.08□□□□□ -0.96
LRFN1-201ENST00000248668 Q5W150 140 aa9.08□□□□□ -0.96
LRFN1-201ENST00000248668 LINC01558Q9Y6Z2 57 aa9.06□□□□□ -0.96
LRFN1-201ENST00000248668 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
LRFN1-201ENST00000248668 TYMSOSQ8TAI1 123 aa9.03□□□□□ -0.96
LRFN1-201ENST00000248668 HRES1P13985 223 aa9.02□□□□□ -0.97
LRFN1-201ENST00000248668 KMT2CQ8NEZ4 4911 aaKnown RBP8.99□□□□□ -0.97
LRFN1-201ENST00000248668 CSAG1Q6PB30 78 aa8.98□□□□□ -0.97
LRFN1-201ENST00000248668 APOBP04114 4563 aaKnown RBP8.93□□□□□ -0.98
LRFN1-201ENST00000248668 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
LRFN1-201ENST00000248668 RYR2Q92736 4967 aa8.92□□□□□ -0.98
LRFN1-201ENST00000248668 LINC00304Q8N9R0 145 aa8.89□□□□□ -0.99
LRFN1-201ENST00000248668 A0A1B0GVY2 172 aa8.87□□□□□ -0.99
LRFN1-201ENST00000248668 SPINK1P00995 79 aa8.87□□□□□ -0.99
LRFN1-201ENST00000248668 KRTAP16-1A8MUX0 517 aa8.87□□□□□ -0.99
LRFN1-201ENST00000248668 A0A1B0GU69 56 aa8.85□□□□□ -0.99
LRFN1-201ENST00000248668 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
LRFN1-201ENST00000248668 IGKV2D-30A0A075B6S6 120 aa8.85□□□□□ -0.99
LRFN1-201ENST00000248668 IGKV2-30P06310 120 aa8.85□□□□□ -0.99
LRFN1-201ENST00000248668 C9orf92A6NGG3 77 aa8.79□□□□□ -1
LRFN1-201ENST00000248668 MIR22HGQ0VDD5 57 aa8.78□□□□□ -1
LRFN1-201ENST00000248668 KRTAP10-4P60372 401 aaPredicted RBP8.76□□□□□ -1.01
LRFN1-201ENST00000248668 LRP1Q07954 4544 aaKnown RBP8.73□□□□□ -1.01
LRFN1-201ENST00000248668 CRIPTQ9P021 101 aa8.71□□□□□ -1.02
LRFN1-201ENST00000248668 ACYP2P14621 99 aa8.7□□□□□ -1.02
LRFN1-201ENST00000248668 PKHD1L1Q86WI1 4243 aa8.7□□□□□ -1.02
LRFN1-201ENST00000248668 UQCR11O14957 56 aa8.69□□□□□ -1.02
LRFN1-201ENST00000248668 RYR3Q15413 4870 aa8.69□□□□□ -1.02
LRFN1-201ENST00000248668 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
LRFN1-201ENST00000248668 Q8N1X5 172 aa8.64□□□□□ -1.03
LRFN1-201ENST00000248668 RPS29P62273 56 aaKnown RBP8.63□□□□□ -1.03
LRFN1-201ENST00000248668 SPATA8Q6RVD6 105 aa8.63□□□□□ -1.03
LRFN1-201ENST00000248668 HSPG2P98160 4391 aa8.62□□□□□ -1.03
LRFN1-201ENST00000248668 Q5VSD8 79 aa8.57□□□□□ -1.04
LRFN1-201ENST00000248668 MYCBP2O75592 4640 aa8.57□□□□□ -1.04
LRFN1-201ENST00000248668 KIAA1109Q2LD37 5005 aa8.55□□□□□ -1.04
LRFN1-201ENST00000248668 TNXBP22105 4242 aa8.54□□□□□ -1.04
LRFN1-201ENST00000248668 ROMO1P60602 79 aa8.53□□□□□ -1.04
LRFN1-201ENST00000248668 RYR1P21817 5038 aa8.51□□□□□ -1.05
LRFN1-201ENST00000248668 KRTAP17-1Q9BYP8 105 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms