RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 KRTAP10-2P60368 255 aa8.24□□□□□ -1.09
NCLN-201ENST00000246117 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
NCLN-201ENST00000246117 AKAP9Q99996 3911 aa8.2□□□□□ -1.1
NCLN-201ENST00000246117 SPRR1BP22528 89 aa8.2□□□□□ -1.1
NCLN-201ENST00000246117 A8MU10 97 aa8.19□□□□□ -1.1
NCLN-201ENST00000246117 CYP4F30PQ9H0H9 118 aa8.19□□□□□ -1.1
NCLN-201ENST00000246117 SPANXA2-OT1Q8N9U9 137 aa8.19□□□□□ -1.1
NCLN-201ENST00000246117 Q1T7F1 81 aa8.18□□□□□ -1.1
NCLN-201ENST00000246117 KRTAP29-1A8MX34 341 aaPredicted RBP8.18□□□□□ -1.1
NCLN-201ENST00000246117 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
NCLN-201ENST00000246117 HRES1P13985 223 aa8.16□□□□□ -1.1
NCLN-201ENST00000246117 C8orf87E5RJ46 101 aa8.16□□□□□ -1.1
NCLN-201ENST00000246117 PLAC8Q9NZF1 115 aa8.16□□□□□ -1.1
NCLN-201ENST00000246117 Q5VV11 94 aa8.14□□□□□ -1.11
NCLN-201ENST00000246117 LINC00304Q8N9R0 145 aa8.14□□□□□ -1.11
NCLN-201ENST00000246117 ZCCHC13Q8WW36 166 aaKnown RBP8.14□□□□□ -1.11
NCLN-201ENST00000246117 Q6ZRN7 208 aaPredicted RBP8.12□□□□□ -1.11
NCLN-201ENST00000246117 KRTAP10-1P60331 282 aa8.12□□□□□ -1.11
NCLN-201ENST00000246117 Q5W150 140 aa8.11□□□□□ -1.11
NCLN-201ENST00000246117 SPINK7P58062 85 aa8.1□□□□□ -1.11
NCLN-201ENST00000246117 K7ERS5 55 aa8.07□□□□□ -1.12
NCLN-201ENST00000246117 MEGF8Q7Z7M0 2845 aa8.05□□□□□ -1.12
NCLN-201ENST00000246117 UQCR11O14957 56 aa8.04□□□□□ -1.12
NCLN-201ENST00000246117 MIR22HGQ0VDD5 57 aa8.04□□□□□ -1.12
NCLN-201ENST00000246117 Q6ZR54 194 aa8.01□□□□□ -1.13
NCLN-201ENST00000246117 PRAC1Q96KF2 57 aa8.01□□□□□ -1.13
NCLN-201ENST00000246117 CDC42SE1Q9NRR8 79 aa8□□□□□ -1.13
NCLN-201ENST00000246117 KRTAP13-1Q8IUC0 172 aa7.99□□□□□ -1.13
NCLN-201ENST00000246117 LINC00483Q53H64 154 aa7.98□□□□□ -1.13
NCLN-201ENST00000246117 KTN1-AS1Q86SY8 53 aa7.96□□□□□ -1.13
NCLN-201ENST00000246117 LCE6AA0A183 80 aa7.96□□□□□ -1.14
NCLN-201ENST00000246117 Q75L30 129 aa7.96□□□□□ -1.14
NCLN-201ENST00000246117 LCA10Q71F78 164 aa7.95□□□□□ -1.14
NCLN-201ENST00000246117 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
NCLN-201ENST00000246117 A0A0D9SG42 100 aa7.93□□□□□ -1.14
NCLN-201ENST00000246117 KRTAP13-2Q52LG2 175 aa7.9□□□□□ -1.14
NCLN-201ENST00000246117 CRIPTQ9P021 101 aa7.87□□□□□ -1.15
NCLN-201ENST00000246117 RBM12B-AS1Q9P1G2 102 aa7.86□□□□□ -1.15
NCLN-201ENST00000246117 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
NCLN-201ENST00000246117 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
NCLN-201ENST00000246117 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
NCLN-201ENST00000246117 A0A1B0GU33 70 aa7.74□□□□□ -1.17
NCLN-201ENST00000246117 SPATA8Q6RVD6 105 aa7.7□□□□□ -1.18
NCLN-201ENST00000246117 SPINT4Q6UDR6 99 aa7.69□□□□□ -1.18
NCLN-201ENST00000246117 CSAG1Q6PB30 78 aa7.69□□□□□ -1.18
NCLN-201ENST00000246117 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
NCLN-201ENST00000246117 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
NCLN-201ENST00000246117 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
NCLN-201ENST00000246117 Q5VSD8 79 aa7.6□□□□□ -1.19
NCLN-201ENST00000246117 A6NN06 94 aa7.6□□□□□ -1.19
NCLN-201ENST00000246117 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
NCLN-201ENST00000246117 J3QL48 77 aa7.56□□□□□ -1.2
NCLN-201ENST00000246117 Q6ZSA8 131 aa7.52□□□□□ -1.21
NCLN-201ENST00000246117 ANK2Q01484 3957 aa7.52□□□□□ -1.21
NCLN-201ENST00000246117 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
NCLN-201ENST00000246117 H1FX-AS1Q4G0G2 97 aa7.46□□□□□ -1.22
NCLN-201ENST00000246117 S4R3F8 94 aa7.45□□□□□ -1.22
NCLN-201ENST00000246117 PLECQ15149 4684 aaKnown RBP7.44□□□□□ -1.22
NCLN-201ENST00000246117 KRTAP16-1A8MUX0 517 aa7.44□□□□□ -1.22
NCLN-201ENST00000246117 DNHD1Q96M86 4753 aa7.4□□□□□ -1.23
NCLN-201ENST00000246117 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.23
NCLN-201ENST00000246117 LYSTQ99698 3801 aa7.39□□□□□ -1.23
NCLN-201ENST00000246117 H3BS24 57 aa7.38□□□□□ -1.23
NCLN-201ENST00000246117 DNAH9Q9NYC9 4486 aa7.35□□□□□ -1.23
NCLN-201ENST00000246117 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
NCLN-201ENST00000246117 RPS29P62273 56 aaKnown RBP7.33□□□□□ -1.24
NCLN-201ENST00000246117 DNAH11Q96DT5 4516 aa7.33□□□□□ -1.24
NCLN-201ENST00000246117 A8MUU9 505 aa7.31□□□□□ -1.24
NCLN-201ENST00000246117 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
NCLN-201ENST00000246117 H0YAA0 97 aa7.28□□□□□ -1.24
NCLN-201ENST00000246117 R4GN34 69 aa7.27□□□□□ -1.25
NCLN-201ENST00000246117 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
NCLN-201ENST00000246117 M0QZ58 72 aa7.24□□□□□ -1.25
NCLN-201ENST00000246117 ROMO1P60602 79 aa7.24□□□□□ -1.25
NCLN-201ENST00000246117 DNAH1Q9P2D7 4330 aa7.23□□□□□ -1.25
NCLN-201ENST00000246117 PRKDCP78527 4128 aaKnown RBP7.22□□□□□ -1.25
NCLN-201ENST00000246117 CAMK2N1Q7Z7J9 78 aa7.22□□□□□ -1.25
NCLN-201ENST00000246117 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
NCLN-201ENST00000246117 C10orf95Q9H7T3 257 aa7.18□□□□□ -1.26
NCLN-201ENST00000246117 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
NCLN-201ENST00000246117 XP32Q5T750 250 aa7.16□□□□□ -1.26
NCLN-201ENST00000246117 DNAH8Q96JB1 4490 aa7.16□□□□□ -1.26
NCLN-201ENST00000246117 FAT1Q14517 4588 aa7.13□□□□□ -1.27
NCLN-201ENST00000246117 KRTAP21-3Q3LHN1 58 aa7.13□□□□□ -1.27
NCLN-201ENST00000246117 P0C880 135 aa7.12□□□□□ -1.27
NCLN-201ENST00000246117 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
NCLN-201ENST00000246117 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
NCLN-201ENST00000246117 M0R2T5 61 aa7.1□□□□□ -1.27
NCLN-201ENST00000246117 DNAH7Q8WXX0 4024 aa7.09□□□□□ -1.27
NCLN-201ENST00000246117 LRP1BQ9NZR2 4599 aa7.08□□□□□ -1.28
NCLN-201ENST00000246117 FRAS1Q86XX4 4008 aa7.06□□□□□ -1.28
NCLN-201ENST00000246117 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
NCLN-201ENST00000246117 A0A1B0GVY2 172 aa7.04□□□□□ -1.28
NCLN-201ENST00000246117 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
NCLN-201ENST00000246117 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
NCLN-201ENST00000246117 VPS13DQ5THJ4 4388 aa6.97□□□□□ -1.29
NCLN-201ENST00000246117 CMYA5Q8N3K9 4069 aa6.95□□□□□ -1.3
NCLN-201ENST00000246117 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
NCLN-201ENST00000246117 DNAH6Q9C0G6 4158 aa6.93□□□□□ -1.3
NCLN-201ENST00000246117 DNAH2Q9P225 4427 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms