RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 SACSQ9NZJ4 4579 aa12.14□□□□□ -0.47
HOXC13-201ENST00000243056 IGLV8-61A0A075B6I0 122 aa12.13□□□□□ -0.47
HOXC13-201ENST00000243056 FRAS1Q86XX4 4008 aa12.13□□□□□ -0.47
HOXC13-201ENST00000243056 KMT2CQ8NEZ4 4911 aaKnown RBP12.13□□□□□ -0.47
HOXC13-201ENST00000243056 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
HOXC13-201ENST00000243056 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
HOXC13-201ENST00000243056 ASB16-AS1Q495Z4 193 aa12.1□□□□□ -0.47
HOXC13-201ENST00000243056 ALMS1Q8TCU4 4167 aa12.1□□□□□ -0.47
HOXC13-201ENST00000243056 H0Y9J4 135 aa12.09□□□□□ -0.47
HOXC13-201ENST00000243056 TLX1NBP0CAT3 122 aa12.07□□□□□ -0.48
HOXC13-201ENST00000243056 DNAH17Q9UFH2 4485 aa12.06□□□□□ -0.48
HOXC13-201ENST00000243056 C1orf134Q5TEV5 83 aa12.06□□□□□ -0.48
HOXC13-201ENST00000243056 REG3GQ6UW15 175 aa12.06□□□□□ -0.48
HOXC13-201ENST00000243056 DNAH6Q9C0G6 4158 aa12.05□□□□□ -0.48
HOXC13-201ENST00000243056 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
HOXC13-201ENST00000243056 CSAG1Q6PB30 78 aa12.03□□□□□ -0.48
HOXC13-201ENST00000243056 A0A087WTM6 91 aa12.02□□□□□ -0.48
HOXC13-201ENST00000243056 PRLHP81277 87 aa12.02□□□□□ -0.48
HOXC13-201ENST00000243056 CHTF8P0CG12 524 aa12.02□□□□□ -0.49
HOXC13-201ENST00000243056 FAT2Q9NYQ8 4349 aa12□□□□□ -0.49
HOXC13-201ENST00000243056 TP53AIP1Q9HCN2 124 aa11.99□□□□□ -0.49
HOXC13-201ENST00000243056 A0A096LNI7 61 aa11.99□□□□□ -0.49
HOXC13-201ENST00000243056 A0A087X002 238 aa11.97□□□□□ -0.49
HOXC13-201ENST00000243056 PANO1I0J062 215 aa11.97□□□□□ -0.49
HOXC13-201ENST00000243056 DNAH11Q96DT5 4516 aa11.96□□□□□ -0.49
HOXC13-201ENST00000243056 SPATA8Q6RVD6 105 aa11.96□□□□□ -0.5
HOXC13-201ENST00000243056 C14orf177Q52M58 125 aa11.93□□□□□ -0.5
HOXC13-201ENST00000243056 PKHD1P08F94 4074 aa11.92□□□□□ -0.5
HOXC13-201ENST00000243056 RYR2Q92736 4967 aa11.92□□□□□ -0.5
HOXC13-201ENST00000243056 DNAH5Q8TE73 4624 aa11.91□□□□□ -0.5
HOXC13-201ENST00000243056 KRTAP10-2P60368 255 aa11.91□□□□□ -0.5
HOXC13-201ENST00000243056 PKD1P98161 4303 aa11.91□□□□□ -0.5
HOXC13-201ENST00000243056 SRRM2Q9UQ35 2752 aaKnown RBP11.88□□□□□ -0.51
HOXC13-201ENST00000243056 C8orf17Q9NRJ1 99 aa11.88□□□□□ -0.51
HOXC13-201ENST00000243056 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.87□□□□□ -0.51
HOXC13-201ENST00000243056 Q96NJ1 140 aa11.86□□□□□ -0.51
HOXC13-201ENST00000243056 RYR3Q15413 4870 aa11.85□□□□□ -0.51
HOXC13-201ENST00000243056 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
HOXC13-201ENST00000243056 A0A1B0GU69 56 aa11.84□□□□□ -0.51
HOXC13-201ENST00000243056 MIR22HGQ0VDD5 57 aa11.84□□□□□ -0.51
HOXC13-201ENST00000243056 KRTAP11-1Q8IUC1 163 aa11.81□□□□□ -0.52
HOXC13-201ENST00000243056 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
HOXC13-201ENST00000243056 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
HOXC13-201ENST00000243056 SPRR1BP22528 89 aa11.79□□□□□ -0.52
HOXC13-201ENST00000243056 ACYP2P14621 99 aa11.77□□□□□ -0.52
HOXC13-201ENST00000243056 IGHV6-1A0A0B4J1U7 121 aa11.77□□□□□ -0.53
HOXC13-201ENST00000243056 MRPL34Q9BQ48 92 aaKnown RBP11.75□□□□□ -0.53
HOXC13-201ENST00000243056 UQCR11O14957 56 aa11.73□□□□□ -0.53
HOXC13-201ENST00000243056 SPACA4Q8TDM5 124 aa11.73□□□□□ -0.53
HOXC13-201ENST00000243056 ZNF861PO60384 105 aa11.72□□□□□ -0.53
HOXC13-201ENST00000243056 NOTCH2NLQ7Z3S9 236 aa11.72□□□□□ -0.53
HOXC13-201ENST00000243056 A0A1B0GVX0 72 aa11.71□□□□□ -0.54
HOXC13-201ENST00000243056 KRTAP10-1P60331 282 aa11.71□□□□□ -0.54
HOXC13-201ENST00000243056 Q5W150 140 aa11.71□□□□□ -0.54
HOXC13-201ENST00000243056 LRP1BQ9NZR2 4599 aa11.67□□□□□ -0.54
HOXC13-201ENST00000243056 KRTAP13-3Q3SY46 172 aa11.67□□□□□ -0.54
HOXC13-201ENST00000243056 DMAC1Q96GE9 116 aa11.67□□□□□ -0.54
HOXC13-201ENST00000243056 ROMO1P60602 79 aa11.64□□□□□ -0.55
HOXC13-201ENST00000243056 DYNC1H1Q14204 4646 aaKnown RBP11.63□□□□□ -0.55
HOXC13-201ENST00000243056 CIRBP-AS1Q8TBR5 109 aa11.61□□□□□ -0.55
HOXC13-201ENST00000243056 IGLV9-49A0A0B4J1Y8 123 aa11.56□□□□□ -0.56
HOXC13-201ENST00000243056 A0A1B0GVY2 172 aa11.56□□□□□ -0.56
HOXC13-201ENST00000243056 CDK2AP2O75956 126 aa11.54□□□□□ -0.56
HOXC13-201ENST00000243056 KRTAP25-1Q3LHN0 102 aa11.53□□□□□ -0.56
HOXC13-201ENST00000243056 PSORS1C2Q9UIG4 136 aa11.53□□□□□ -0.56
HOXC13-201ENST00000243056 VPS13BQ7Z7G8 4022 aa11.53□□□□□ -0.56
HOXC13-201ENST00000243056 Q6ZSA8 131 aa11.51□□□□□ -0.57
HOXC13-201ENST00000243056 FAT1Q14517 4588 aa11.47□□□□□ -0.57
HOXC13-201ENST00000243056 APOBP04114 4563 aaKnown RBP11.46□□□□□ -0.58
HOXC13-201ENST00000243056 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
HOXC13-201ENST00000243056 EPPK1P58107 5090 aaKnown RBP11.44□□□□□ -0.58
HOXC13-201ENST00000243056 IGLV7-43P04211 117 aa11.43□□□□□ -0.58
HOXC13-201ENST00000243056 P0C880 135 aa11.43□□□□□ -0.58
HOXC13-201ENST00000243056 KRTAP13-1Q8IUC0 172 aa11.41□□□□□ -0.58
HOXC13-201ENST00000243056 ANAPC11Q9NYG5 84 aa11.39□□□□□ -0.59
HOXC13-201ENST00000243056 A8MUU9 505 aa11.38□□□□□ -0.59
HOXC13-201ENST00000243056 SPINK6Q6UWN8 80 aa11.35□□□□□ -0.59
HOXC13-201ENST00000243056 LINC00304Q8N9R0 145 aa11.34□□□□□ -0.59
HOXC13-201ENST00000243056 IGKV2-30P06310 120 aa11.3□□□□□ -0.6
HOXC13-201ENST00000243056 KIAA1109Q2LD37 5005 aa11.3□□□□□ -0.6
HOXC13-201ENST00000243056 LINC00483Q53H64 154 aa11.28□□□□□ -0.6
HOXC13-201ENST00000243056 HSPG2P98160 4391 aa11.26□□□□□ -0.61
HOXC13-201ENST00000243056 H0YAA0 97 aa11.25□□□□□ -0.61
HOXC13-201ENST00000243056 CRIPTQ9P021 101 aa11.22□□□□□ -0.61
HOXC13-201ENST00000243056 FAM229AH3BQW9 127 aa11.21□□□□□ -0.61
HOXC13-201ENST00000243056 KRTAP17-1Q9BYP8 105 aa11.2□□□□□ -0.62
HOXC13-201ENST00000243056 RYR1P21817 5038 aa11.18□□□□□ -0.62
HOXC13-201ENST00000243056 SPINK1P00995 79 aa11.15□□□□□ -0.62
HOXC13-201ENST00000243056 KRTAP10-4P60372 401 aaPredicted RBP11.11□□□□□ -0.63
HOXC13-201ENST00000243056 FLG2Q5D862 2391 aaPredicted RBP11.11□□□□□ -0.63
HOXC13-201ENST00000243056 IGKV2D-30A0A075B6S6 120 aa11.09□□□□□ -0.63
HOXC13-201ENST00000243056 KRTAP16-1A8MUX0 517 aa11.08□□□□□ -0.64
HOXC13-201ENST00000243056 KRTAP1-4P0C5Y4 121 aa11.07□□□□□ -0.64
HOXC13-201ENST00000243056 LRP1Q07954 4544 aaKnown RBP11.06□□□□□ -0.64
HOXC13-201ENST00000243056 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
HOXC13-201ENST00000243056 Q5VSD8 79 aa11□□□□□ -0.65
HOXC13-201ENST00000243056 MYCBP2O75592 4640 aa11□□□□□ -0.65
HOXC13-201ENST00000243056 SSBP3-AS1Q7Z2R9 100 aa10.99□□□□□ -0.65
HOXC13-201ENST00000243056 TYMSOSQ8TAI1 123 aa10.99□□□□□ -0.65
HOXC13-201ENST00000243056 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms