RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 CHTF8P0CG12 524 aa5.84□□□□□ -1.47
TGFB3-201ENST00000238682 PRR15LQ9BU68 103 aa5.83□□□□□ -1.48
TGFB3-201ENST00000238682 DHRS4-AS1Q9P1J3 65 aa5.83□□□□□ -1.48
TGFB3-201ENST00000238682 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
TGFB3-201ENST00000238682 KRTAP4-5Q9BYR2 181 aa5.82□□□□□ -1.48
TGFB3-201ENST00000238682 IGLV1-50A0A075B6I6 118 aa5.82□□□□□ -1.48
TGFB3-201ENST00000238682 SPRR1AP35321 89 aa5.81□□□□□ -1.48
TGFB3-201ENST00000238682 C7orf33Q8WU49 177 aa5.81□□□□□ -1.48
TGFB3-201ENST00000238682 H3BPC8 53 aa5.8□□□□□ -1.48
TGFB3-201ENST00000238682 LINC00208Q96KT6 92 aa5.8□□□□□ -1.48
TGFB3-201ENST00000238682 A8MU10 97 aa5.79□□□□□ -1.48
TGFB3-201ENST00000238682 IGKV4-1P06312 121 aa5.79□□□□□ -1.48
TGFB3-201ENST00000238682 IGKV2-24A0A0C4DH68 120 aa5.79□□□□□ -1.48
TGFB3-201ENST00000238682 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.79□□□□□ -1.48
TGFB3-201ENST00000238682 A0A1W2PNN7 141 aa5.78□□□□□ -1.48
TGFB3-201ENST00000238682 LINC00575Q6W349 94 aa5.78□□□□□ -1.48
TGFB3-201ENST00000238682 KRTAP7-1Q8IUC3 87 aa5.78□□□□□ -1.48
TGFB3-201ENST00000238682 ADM2Q7Z4H4 148 aa5.78□□□□□ -1.48
TGFB3-201ENST00000238682 KIAA1109Q2LD37 5005 aa5.77□□□□□ -1.49
TGFB3-201ENST00000238682 ETDCA0A1B0GVM5 59 aa5.76□□□□□ -1.49
TGFB3-201ENST00000238682 COX7BP24311 80 aa5.76□□□□□ -1.49
TGFB3-201ENST00000238682 LINC01558Q9Y6Z2 57 aa5.76□□□□□ -1.49
TGFB3-201ENST00000238682 HSPG2P98160 4391 aa5.76□□□□□ -1.49
TGFB3-201ENST00000238682 FAM168BA1KXE4 195 aa5.75□□□□□ -1.49
TGFB3-201ENST00000238682 KRTAP4-16G5E9R7 235 aaPredicted RBP5.75□□□□□ -1.49
TGFB3-201ENST00000238682 RETNLBQ9BQ08 111 aa5.75□□□□□ -1.49
TGFB3-201ENST00000238682 LRP1BQ9NZR2 4599 aa5.74□□□□□ -1.49
TGFB3-201ENST00000238682 APOBP04114 4563 aaKnown RBP5.73□□□□□ -1.49
TGFB3-201ENST00000238682 RPL37AP61513 92 aaKnown RBP5.73□□□□□ -1.49
TGFB3-201ENST00000238682 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.73□□□□□ -1.49
TGFB3-201ENST00000238682 Q6ZQY7 126 aa5.73□□□□□ -1.49
TGFB3-201ENST00000238682 Q6ZRX8 168 aa5.73□□□□□ -1.49
TGFB3-201ENST00000238682 VPS13BQ7Z7G8 4022 aa5.73□□□□□ -1.49
TGFB3-201ENST00000238682 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
TGFB3-201ENST00000238682 CIRBP-AS1Q8TBR5 109 aa5.73□□□□□ -1.49
TGFB3-201ENST00000238682 PCLOQ9Y6V0 5065 aa5.72□□□□□ -1.49
TGFB3-201ENST00000238682 PANO1I0J062 215 aa5.72□□□□□ -1.49
TGFB3-201ENST00000238682 PKHD1P08F94 4074 aa5.72□□□□□ -1.49
TGFB3-201ENST00000238682 KRTAP16-1A8MUX0 517 aa5.7□□□□□ -1.5
TGFB3-201ENST00000238682 KRTAP10-4P60372 401 aaPredicted RBP5.7□□□□□ -1.5
TGFB3-201ENST00000238682 SMR3BP02814 79 aaPredicted RBP5.7□□□□□ -1.5
TGFB3-201ENST00000238682 KRTAP13-1Q8IUC0 172 aa5.7□□□□□ -1.5
TGFB3-201ENST00000238682 DNAH5Q8TE73 4624 aa5.68□□□□□ -1.5
TGFB3-201ENST00000238682 ZNF861PO60384 105 aa5.68□□□□□ -1.5
TGFB3-201ENST00000238682 PSORS1C2Q9UIG4 136 aa5.68□□□□□ -1.5
TGFB3-201ENST00000238682 IGLV7-43P04211 117 aa5.67□□□□□ -1.5
TGFB3-201ENST00000238682 SPRR1BP22528 89 aa5.67□□□□□ -1.5
TGFB3-201ENST00000238682 IGLV5-48A0A075B6I7 105 aa5.67□□□□□ -1.5
TGFB3-201ENST00000238682 DNAH8Q96JB1 4490 aa5.66□□□□□ -1.5
TGFB3-201ENST00000238682 SMIM29Q86T20 159 aa5.66□□□□□ -1.5
TGFB3-201ENST00000238682 DEFB105AQ8NG35 78 aa5.65□□□□□ -1.5
TGFB3-201ENST00000238682 C1orf137Q5JT78 98 aa5.65□□□□□ -1.51
TGFB3-201ENST00000238682 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
TGFB3-201ENST00000238682 ABCA13Q86UQ4 5058 aa5.64□□□□□ -1.51
TGFB3-201ENST00000238682 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
TGFB3-201ENST00000238682 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
TGFB3-201ENST00000238682 PRR4Q16378 134 aa5.63□□□□□ -1.51
TGFB3-201ENST00000238682 C8orf17Q9NRJ1 99 aa5.62□□□□□ -1.51
TGFB3-201ENST00000238682 ST20-AS1Q8NBB2 130 aa5.61□□□□□ -1.51
TGFB3-201ENST00000238682 COA5Q86WW8 74 aa5.6□□□□□ -1.51
TGFB3-201ENST00000238682 Q8N377 158 aa5.6□□□□□ -1.51
TGFB3-201ENST00000238682 Q8NBF4 154 aa5.6□□□□□ -1.51
TGFB3-201ENST00000238682 IGLV8-61A0A075B6I0 122 aa5.59□□□□□ -1.51
TGFB3-201ENST00000238682 H0Y9P7 68 aa5.59□□□□□ -1.51
TGFB3-201ENST00000238682 SPRR4Q96PI1 79 aa5.59□□□□□ -1.51
TGFB3-201ENST00000238682 PRLHP81277 87 aa5.59□□□□□ -1.51
TGFB3-201ENST00000238682 PKHD1L1Q86WI1 4243 aa5.58□□□□□ -1.52
TGFB3-201ENST00000238682 IGLV7-46A0A075B6I9 117 aa5.58□□□□□ -1.52
TGFB3-201ENST00000238682 ROMO1P60602 79 aa5.58□□□□□ -1.52
TGFB3-201ENST00000238682 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
TGFB3-201ENST00000238682 A0A1W2PNM2 257 aa5.57□□□□□ -1.52
TGFB3-201ENST00000238682 SPINK7P58062 85 aa5.55□□□□□ -1.52
TGFB3-201ENST00000238682 LUZP6Q538Z0 58 aa5.55□□□□□ -1.52
TGFB3-201ENST00000238682 Q8N9L7 120 aa5.55□□□□□ -1.52
TGFB3-201ENST00000238682 SSBP3-AS1Q7Z2R9 100 aa5.54□□□□□ -1.52
TGFB3-201ENST00000238682 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
TGFB3-201ENST00000238682 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
TGFB3-201ENST00000238682 A0A0G2JQZ4 141 aa5.5□□□□□ -1.53
TGFB3-201ENST00000238682 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
TGFB3-201ENST00000238682 KRTAP10-8P60410 259 aa5.49□□□□□ -1.53
TGFB3-201ENST00000238682 RPS29P62273 56 aaKnown RBP5.49□□□□□ -1.53
TGFB3-201ENST00000238682 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
TGFB3-201ENST00000238682 SRRM2Q9UQ35 2752 aaKnown RBP5.47□□□□□ -1.53
TGFB3-201ENST00000238682 A8MWP4 228 aa5.46□□□□□ -1.54
TGFB3-201ENST00000238682 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
TGFB3-201ENST00000238682 KRTAP3-1Q9BYR8 98 aa5.46□□□□□ -1.54
TGFB3-201ENST00000238682 MYCBP2O75592 4640 aa5.45□□□□□ -1.54
TGFB3-201ENST00000238682 A0A087WSZ3 146 aa5.45□□□□□ -1.54
TGFB3-201ENST00000238682 DSCR10P59022 87 aa5.45□□□□□ -1.54
TGFB3-201ENST00000238682 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
TGFB3-201ENST00000238682 DMBT1Q9UGM3 2413 aaPredicted RBP5.45□□□□□ -1.54
TGFB3-201ENST00000238682 FAT1Q14517 4588 aa5.43□□□□□ -1.54
TGFB3-201ENST00000238682 UQCR11O14957 56 aa5.42□□□□□ -1.54
TGFB3-201ENST00000238682 TYMSOSQ8TAI1 123 aa5.42□□□□□ -1.54
TGFB3-201ENST00000238682 SPINK1P00995 79 aa5.41□□□□□ -1.54
TGFB3-201ENST00000238682 K7EQZ3 153 aa5.4□□□□□ -1.54
TGFB3-201ENST00000238682 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.55
TGFB3-201ENST00000238682 KRTAP13-2Q52LG2 175 aa5.4□□□□□ -1.55
TGFB3-201ENST00000238682 ANAPC11Q9NYG5 84 aa5.39□□□□□ -1.55
TGFB3-201ENST00000238682 FAT3Q8TDW7 4589 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms