RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
SGIP1-201ENST00000237247 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
SGIP1-201ENST00000237247 LINC00472Q9H8W2 130 aa3.88□□□□□ -1.79
SGIP1-201ENST00000237247 FN1P02751 2386 aaKnown RBP3.87□□□□□ -1.79
SGIP1-201ENST00000237247 TENM3Q9P273 2699 aa3.87□□□□□ -1.79
SGIP1-201ENST00000237247 RYR3Q15413 4870 aa3.87□□□□□ -1.79
SGIP1-201ENST00000237247 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
SGIP1-201ENST00000237247 CASC10Q5T4H9 136 aa3.87□□□□□ -1.79
SGIP1-201ENST00000237247 C14orf177Q52M58 125 aa3.86□□□□□ -1.79
SGIP1-201ENST00000237247 A0A087WSZ3 146 aa3.86□□□□□ -1.79
SGIP1-201ENST00000237247 KRTAP24-1Q3LI83 254 aa3.86□□□□□ -1.79
SGIP1-201ENST00000237247 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
SGIP1-201ENST00000237247 HRES1P13985 223 aa3.85□□□□□ -1.79
SGIP1-201ENST00000237247 TP53AIP1Q9HCN2 124 aa3.85□□□□□ -1.79
SGIP1-201ENST00000237247 A0A096LNI7 61 aa3.84□□□□□ -1.79
SGIP1-201ENST00000237247 MMP24-AS1A0A0U1RRL7 71 aa3.84□□□□□ -1.79
SGIP1-201ENST00000237247 KRTAP13-1Q8IUC0 172 aa3.84□□□□□ -1.79
SGIP1-201ENST00000237247 KRTAP21-3Q3LHN1 58 aa3.84□□□□□ -1.8
SGIP1-201ENST00000237247 WFDC13Q8IUB5 93 aa3.83□□□□□ -1.8
SGIP1-201ENST00000237247 LRP1BQ9NZR2 4599 aa3.83□□□□□ -1.8
SGIP1-201ENST00000237247 A0A1W2PNN7 141 aa3.83□□□□□ -1.8
SGIP1-201ENST00000237247 PRLHP81277 87 aa3.82□□□□□ -1.8
SGIP1-201ENST00000237247 LINC00483Q53H64 154 aa3.82□□□□□ -1.8
SGIP1-201ENST00000237247 ATRQ13535 2644 aa3.82□□□□□ -1.8
SGIP1-201ENST00000237247 ZNF861PO60384 105 aa3.81□□□□□ -1.8
SGIP1-201ENST00000237247 Q96NJ1 140 aa3.8□□□□□ -1.8
SGIP1-201ENST00000237247 KRTAP25-1Q3LHN0 102 aa3.79□□□□□ -1.8
SGIP1-201ENST00000237247 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
SGIP1-201ENST00000237247 MIR22HGQ0VDD5 57 aa3.79□□□□□ -1.8
SGIP1-201ENST00000237247 P0C880 135 aa3.78□□□□□ -1.8
SGIP1-201ENST00000237247 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
SGIP1-201ENST00000237247 KRTAP11-1Q8IUC1 163 aa3.78□□□□□ -1.8
SGIP1-201ENST00000237247 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.81
SGIP1-201ENST00000237247 IGKV2-24A0A0C4DH68 120 aa3.77□□□□□ -1.81
SGIP1-201ENST00000237247 C8orf17Q9NRJ1 99 aa3.77□□□□□ -1.81
SGIP1-201ENST00000237247 UQCR11O14957 56 aa3.77□□□□□ -1.81
SGIP1-201ENST00000237247 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
SGIP1-201ENST00000237247 APLNQ9ULZ1 77 aa3.76□□□□□ -1.81
SGIP1-201ENST00000237247 NBEAL2Q6ZNJ1 2754 aa3.75□□□□□ -1.81
SGIP1-201ENST00000237247 FAT1Q14517 4588 aa3.75□□□□□ -1.81
SGIP1-201ENST00000237247 CHTF8P0CG12 524 aa3.75□□□□□ -1.81
SGIP1-201ENST00000237247 SPACA4Q8TDM5 124 aa3.74□□□□□ -1.81
SGIP1-201ENST00000237247 COL6A5A8TX70 2615 aa3.74□□□□□ -1.81
SGIP1-201ENST00000237247 K7EIL1 84 aa3.74□□□□□ -1.81
SGIP1-201ENST00000237247 PCOTHQ58A44 107 aa3.74□□□□□ -1.81
SGIP1-201ENST00000237247 MRPL34Q9BQ48 92 aaKnown RBP3.74□□□□□ -1.81
SGIP1-201ENST00000237247 A0A1B0GU69 56 aa3.73□□□□□ -1.81
SGIP1-201ENST00000237247 KRTAP13-3Q3SY46 172 aa3.73□□□□□ -1.81
SGIP1-201ENST00000237247 Q6ZRN7 208 aaPredicted RBP3.73□□□□□ -1.81
SGIP1-201ENST00000237247 NBEAL1Q6ZS30 2694 aa3.73□□□□□ -1.81
SGIP1-201ENST00000237247 WWC2-AS2Q96NR7 200 aa3.72□□□□□ -1.81
SGIP1-201ENST00000237247 IGLV5-52A0A0A0MRZ9 124 aa3.72□□□□□ -1.81
SGIP1-201ENST00000237247 ACYP2P14621 99 aa3.72□□□□□ -1.81
SGIP1-201ENST00000237247 STAB1Q9NY15 2570 aa3.72□□□□□ -1.81
SGIP1-201ENST00000237247 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
SGIP1-201ENST00000237247 NBDYA0A0U1RRE5 68 aa3.7□□□□□ -1.82
SGIP1-201ENST00000237247 UBE2DNLQ8IWF7 75 aa3.7□□□□□ -1.82
SGIP1-201ENST00000237247 A8MUU9 505 aa3.69□□□□□ -1.82
SGIP1-201ENST00000237247 KRTAP16-1A8MUX0 517 aa3.69□□□□□ -1.82
SGIP1-201ENST00000237247 CDK2AP2O75956 126 aa3.69□□□□□ -1.82
SGIP1-201ENST00000237247 PANO1I0J062 215 aa3.68□□□□□ -1.82
SGIP1-201ENST00000237247 NUPR2A6NF83 97 aa3.67□□□□□ -1.82
SGIP1-201ENST00000237247 IGLV9-49A0A0B4J1Y8 123 aa3.66□□□□□ -1.82
SGIP1-201ENST00000237247 MGAM2Q2M2H8 2515 aa3.66□□□□□ -1.82
SGIP1-201ENST00000237247 IGLV7-43P04211 117 aa3.66□□□□□ -1.82
SGIP1-201ENST00000237247 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.66□□□□□ -1.82
SGIP1-201ENST00000237247 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.83
SGIP1-201ENST00000237247 SSBP3-AS1Q7Z2R9 100 aa3.64□□□□□ -1.83
SGIP1-201ENST00000237247 A0A087WTM6 91 aa3.64□□□□□ -1.83
SGIP1-201ENST00000237247 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
SGIP1-201ENST00000237247 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
SGIP1-201ENST00000237247 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
SGIP1-201ENST00000237247 FAM229AH3BQW9 127 aa3.63□□□□□ -1.83
SGIP1-201ENST00000237247 Q5W150 140 aa3.62□□□□□ -1.83
SGIP1-201ENST00000237247 EPPK1P58107 5090 aaKnown RBP3.62□□□□□ -1.83
SGIP1-201ENST00000237247 IGKV2-30P06310 120 aa3.61□□□□□ -1.83
SGIP1-201ENST00000237247 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
SGIP1-201ENST00000237247 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
SGIP1-201ENST00000237247 RYR1P21817 5038 aa3.6□□□□□ -1.83
SGIP1-201ENST00000237247 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
SGIP1-201ENST00000237247 LY6G6CO95867 125 aa3.56□□□□□ -1.84
SGIP1-201ENST00000237247 SEC61BP60468 96 aaKnown RBP3.56□□□□□ -1.84
SGIP1-201ENST00000237247 ANAPC11Q9NYG5 84 aa3.56□□□□□ -1.84
SGIP1-201ENST00000237247 TGP01266 2768 aa3.56□□□□□ -1.84
SGIP1-201ENST00000237247 MUC17Q685J3 4493 aa3.55□□□□□ -1.84
SGIP1-201ENST00000237247 IGKV2D-30A0A075B6S6 120 aa3.54□□□□□ -1.84
SGIP1-201ENST00000237247 H0YAA0 97 aa3.54□□□□□ -1.84
SGIP1-201ENST00000237247 KRTAP10-4P60372 401 aaPredicted RBP3.54□□□□□ -1.84
SGIP1-201ENST00000237247 MYCBP2O75592 4640 aa3.53□□□□□ -1.84
SGIP1-201ENST00000237247 CIRBP-AS1Q8TBR5 109 aa3.53□□□□□ -1.84
SGIP1-201ENST00000237247 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.84
SGIP1-201ENST00000237247 LUZP6Q538Z0 58 aa3.52□□□□□ -1.85
SGIP1-201ENST00000237247 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
SGIP1-201ENST00000237247 ABCA13Q86UQ4 5058 aa3.52□□□□□ -1.85
SGIP1-201ENST00000237247 Q6ZSA8 131 aa3.52□□□□□ -1.85
SGIP1-201ENST00000237247 KRTAP13-2Q52LG2 175 aa3.51□□□□□ -1.85
SGIP1-201ENST00000237247 KRTAP17-1Q9BYP8 105 aa3.51□□□□□ -1.85
SGIP1-201ENST00000237247 LRP1Q07954 4544 aaKnown RBP3.51□□□□□ -1.85
SGIP1-201ENST00000237247 K7ERS5 55 aa3.51□□□□□ -1.85
SGIP1-201ENST00000237247 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms