RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 Q1T7F1 81 aa4.76□□□□□ -1.65
NANOG-201ENST00000229307 DNHD1Q96M86 4753 aa4.74□□□□□ -1.65
NANOG-201ENST00000229307 COA5Q86WW8 74 aa4.74□□□□□ -1.65
NANOG-201ENST00000229307 KRTAP4-16G5E9R7 235 aaPredicted RBP4.74□□□□□ -1.65
NANOG-201ENST00000229307 LINC00472Q9H8W2 130 aa4.72□□□□□ -1.65
NANOG-201ENST00000229307 ZNF469Q96JG9 3925 aaPredicted RBP4.72□□□□□ -1.65
NANOG-201ENST00000229307 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.66
NANOG-201ENST00000229307 MMP24-AS1A0A0U1RRL7 71 aa4.71□□□□□ -1.66
NANOG-201ENST00000229307 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
NANOG-201ENST00000229307 VWFP04275 2813 aa4.71□□□□□ -1.66
NANOG-201ENST00000229307 PKD1L1Q8TDX9 2849 aa4.7□□□□□ -1.66
NANOG-201ENST00000229307 A0A087X002 238 aa4.69□□□□□ -1.66
NANOG-201ENST00000229307 CSAG1Q6PB30 78 aa4.69□□□□□ -1.66
NANOG-201ENST00000229307 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
NANOG-201ENST00000229307 ANK2Q01484 3957 aa4.69□□□□□ -1.66
NANOG-201ENST00000229307 ASB16-AS1Q495Z4 193 aa4.67□□□□□ -1.66
NANOG-201ENST00000229307 TGP01266 2768 aa4.67□□□□□ -1.66
NANOG-201ENST00000229307 SPINK7P58062 85 aa4.67□□□□□ -1.66
NANOG-201ENST00000229307 S4R3F8 94 aa4.67□□□□□ -1.66
NANOG-201ENST00000229307 TENM3Q9P273 2699 aa4.67□□□□□ -1.66
NANOG-201ENST00000229307 UQCR11O14957 56 aa4.66□□□□□ -1.66
NANOG-201ENST00000229307 Q5VV11 94 aa4.64□□□□□ -1.67
NANOG-201ENST00000229307 OCR1Q9BZK8 76 aa4.64□□□□□ -1.67
NANOG-201ENST00000229307 HRES1P13985 223 aa4.64□□□□□ -1.67
NANOG-201ENST00000229307 LINC01554Q52M75 96 aa4.64□□□□□ -1.67
NANOG-201ENST00000229307 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
NANOG-201ENST00000229307 KRTAP13-1Q8IUC0 172 aa4.63□□□□□ -1.67
NANOG-201ENST00000229307 MEGF8Q7Z7M0 2845 aa4.63□□□□□ -1.67
NANOG-201ENST00000229307 Q5W150 140 aa4.63□□□□□ -1.67
NANOG-201ENST00000229307 NBEAL2Q6ZNJ1 2754 aa4.63□□□□□ -1.67
NANOG-201ENST00000229307 TENM2Q9NT68 2774 aa4.63□□□□□ -1.67
NANOG-201ENST00000229307 KRTAP11-1Q8IUC1 163 aa4.62□□□□□ -1.67
NANOG-201ENST00000229307 A8MU10 97 aa4.61□□□□□ -1.67
NANOG-201ENST00000229307 KRTAP7-1Q8IUC3 87 aa4.61□□□□□ -1.67
NANOG-201ENST00000229307 PRAC1Q96KF2 57 aa4.61□□□□□ -1.67
NANOG-201ENST00000229307 A0A1B0GVY2 172 aa4.6□□□□□ -1.67
NANOG-201ENST00000229307 KRTAP13-2Q52LG2 175 aa4.59□□□□□ -1.67
NANOG-201ENST00000229307 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
NANOG-201ENST00000229307 Q75L30 129 aa4.58□□□□□ -1.68
NANOG-201ENST00000229307 TRRAPQ9Y4A5 3859 aa4.58□□□□□ -1.68
NANOG-201ENST00000229307 A6NN06 94 aa4.57□□□□□ -1.68
NANOG-201ENST00000229307 Q8N9P0 234 aaPredicted RBP4.57□□□□□ -1.68
NANOG-201ENST00000229307 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
NANOG-201ENST00000229307 RPL37P61927 97 aaKnown RBP4.54□□□□□ -1.68
NANOG-201ENST00000229307 VPS13CQ709C8 3753 aa4.54□□□□□ -1.68
NANOG-201ENST00000229307 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
NANOG-201ENST00000229307 A0A0D9SG42 100 aa4.52□□□□□ -1.69
NANOG-201ENST00000229307 CRIPTQ9P021 101 aa4.52□□□□□ -1.69
NANOG-201ENST00000229307 A0A1B0GU33 70 aa4.51□□□□□ -1.69
NANOG-201ENST00000229307 R4GN34 69 aa4.51□□□□□ -1.69
NANOG-201ENST00000229307 SVEP1Q4LDE5 3571 aa4.5□□□□□ -1.69
NANOG-201ENST00000229307 ALMS1Q8TCU4 4167 aa4.5□□□□□ -1.69
NANOG-201ENST00000229307 KRTAP29-1A8MX34 341 aaPredicted RBP4.49□□□□□ -1.69
NANOG-201ENST00000229307 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
NANOG-201ENST00000229307 H1FX-AS1Q4G0G2 97 aa4.49□□□□□ -1.69
NANOG-201ENST00000229307 DMAC1Q96GE9 116 aa4.48□□□□□ -1.69
NANOG-201ENST00000229307 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
NANOG-201ENST00000229307 HUWE1Q7Z6Z7 4374 aaKnown RBP4.45□□□□□ -1.7
NANOG-201ENST00000229307 DMBT1Q9UGM3 2413 aaPredicted RBP4.45□□□□□ -1.7
NANOG-201ENST00000229307 TPRXLQ17RH7 258 aa4.44□□□□□ -1.7
NANOG-201ENST00000229307 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
NANOG-201ENST00000229307 PLAC4Q8WY50 150 aa4.43□□□□□ -1.7
NANOG-201ENST00000229307 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
NANOG-201ENST00000229307 PRKDCP78527 4128 aaKnown RBP4.43□□□□□ -1.7
NANOG-201ENST00000229307 CUBNO60494 3623 aa4.43□□□□□ -1.7
NANOG-201ENST00000229307 NOTCH2NLQ7Z3S9 236 aa4.42□□□□□ -1.7
NANOG-201ENST00000229307 A8MUU9 505 aa4.42□□□□□ -1.7
NANOG-201ENST00000229307 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
NANOG-201ENST00000229307 M0QZ58 72 aa4.41□□□□□ -1.7
NANOG-201ENST00000229307 A0A0A0MQY5 61 aa4.39□□□□□ -1.71
NANOG-201ENST00000229307 XP32Q5T750 250 aa4.38□□□□□ -1.71
NANOG-201ENST00000229307 DYNC2H1Q8NCM8 4307 aaKnown RBP4.37□□□□□ -1.71
NANOG-201ENST00000229307 CMYA5Q8N3K9 4069 aa4.36□□□□□ -1.71
NANOG-201ENST00000229307 KRTAP10-8P60410 259 aa4.35□□□□□ -1.71
NANOG-201ENST00000229307 DNAH3Q8TD57 4116 aa4.35□□□□□ -1.71
NANOG-201ENST00000229307 FLG2Q5D862 2391 aaPredicted RBP4.34□□□□□ -1.71
NANOG-201ENST00000229307 BIRC6Q9NR09 4857 aa4.33□□□□□ -1.72
NANOG-201ENST00000229307 KRTAP13-3Q3SY46 172 aa4.31□□□□□ -1.72
NANOG-201ENST00000229307 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
NANOG-201ENST00000229307 COL7A1Q02388 2944 aa4.27□□□□□ -1.73
NANOG-201ENST00000229307 RYR2Q92736 4967 aa4.26□□□□□ -1.73
NANOG-201ENST00000229307 ROMO1P60602 79 aa4.25□□□□□ -1.73
NANOG-201ENST00000229307 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
NANOG-201ENST00000229307 DNAH11Q96DT5 4516 aa4.24□□□□□ -1.73
NANOG-201ENST00000229307 KRTAP16-1A8MUX0 517 aa4.23□□□□□ -1.73
NANOG-201ENST00000229307 DNAH1Q9P2D7 4330 aa4.23□□□□□ -1.73
NANOG-201ENST00000229307 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
NANOG-201ENST00000229307 SACSQ9NZJ4 4579 aa4.2□□□□□ -1.74
NANOG-201ENST00000229307 STARD9Q9P2P6 4700 aa4.2□□□□□ -1.74
NANOG-201ENST00000229307 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
NANOG-201ENST00000229307 DNAH10Q8IVF4 4471 aa4.18□□□□□ -1.74
NANOG-201ENST00000229307 DNAH6Q9C0G6 4158 aa4.18□□□□□ -1.74
NANOG-201ENST00000229307 VPS13DQ5THJ4 4388 aa4.17□□□□□ -1.74
NANOG-201ENST00000229307 DNAH7Q8WXX0 4024 aa4.16□□□□□ -1.74
NANOG-201ENST00000229307 LUZP6Q538Z0 58 aa4.16□□□□□ -1.74
NANOG-201ENST00000229307 KRTAP17-1Q9BYP8 105 aa4.16□□□□□ -1.74
NANOG-201ENST00000229307 KRTAP10-10P60014 251 aa4.15□□□□□ -1.75
NANOG-201ENST00000229307 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
NANOG-201ENST00000229307 KMT2CQ8NEZ4 4911 aaKnown RBP4.14□□□□□ -1.75
NANOG-201ENST00000229307 DNAH17Q9UFH2 4485 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms