RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
PRDM4-201ENST00000228437 UQCR11O14957 56 aa8.79□□□□□ -1
PRDM4-201ENST00000228437 NBDYA0A0U1RRE5 68 aa8.77□□□□□ -1.01
PRDM4-201ENST00000228437 COL7A1Q02388 2944 aa8.76□□□□□ -1.01
PRDM4-201ENST00000228437 Q5W150 140 aa8.76□□□□□ -1.01
PRDM4-201ENST00000228437 CSMD3Q7Z407 3707 aa8.76□□□□□ -1.01
PRDM4-201ENST00000228437 IGLV5-52A0A0A0MRZ9 124 aa8.75□□□□□ -1.01
PRDM4-201ENST00000228437 SPRR1BP22528 89 aa8.74□□□□□ -1.01
PRDM4-201ENST00000228437 LINC01554Q52M75 96 aa8.74□□□□□ -1.01
PRDM4-201ENST00000228437 H3BS24 57 aa8.73□□□□□ -1.01
PRDM4-201ENST00000228437 LY6G6CO95867 125 aa8.71□□□□□ -1.02
PRDM4-201ENST00000228437 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
PRDM4-201ENST00000228437 ZNF861PO60384 105 aa8.7□□□□□ -1.02
PRDM4-201ENST00000228437 Q8N1X5 172 aa8.69□□□□□ -1.02
PRDM4-201ENST00000228437 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
PRDM4-201ENST00000228437 Q6ZR54 194 aa8.68□□□□□ -1.02
PRDM4-201ENST00000228437 Q96NJ1 140 aa8.64□□□□□ -1.03
PRDM4-201ENST00000228437 WWC2-AS2Q96NR7 200 aa8.64□□□□□ -1.03
PRDM4-201ENST00000228437 APLNQ9ULZ1 77 aa8.63□□□□□ -1.03
PRDM4-201ENST00000228437 CRIPTQ9P021 101 aa8.62□□□□□ -1.03
PRDM4-201ENST00000228437 A0A087WTM6 91 aa8.61□□□□□ -1.03
PRDM4-201ENST00000228437 NUPR2A6NF83 97 aa8.59□□□□□ -1.03
PRDM4-201ENST00000228437 ANK3Q12955 4377 aaKnown RBP8.58□□□□□ -1.04
PRDM4-201ENST00000228437 TGP01266 2768 aa8.57□□□□□ -1.04
PRDM4-201ENST00000228437 K7ERS5 55 aa8.56□□□□□ -1.04
PRDM4-201ENST00000228437 IGLV7-43P04211 117 aa8.54□□□□□ -1.04
PRDM4-201ENST00000228437 C1orf134Q5TEV5 83 aa8.54□□□□□ -1.04
PRDM4-201ENST00000228437 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
PRDM4-201ENST00000228437 DMAC1Q96GE9 116 aa8.51□□□□□ -1.05
PRDM4-201ENST00000228437 PLA2G1BP04054 148 aaKnown RBP8.47□□□□□ -1.05
PRDM4-201ENST00000228437 KRTAP13-1Q8IUC0 172 aa8.46□□□□□ -1.05
PRDM4-201ENST00000228437 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
PRDM4-201ENST00000228437 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
PRDM4-201ENST00000228437 PLAC8Q9NZF1 115 aa8.45□□□□□ -1.06
PRDM4-201ENST00000228437 LINC00483Q53H64 154 aa8.43□□□□□ -1.06
PRDM4-201ENST00000228437 TYMSOSQ8TAI1 123 aa8.43□□□□□ -1.06
PRDM4-201ENST00000228437 FBN3Q75N90 2809 aa8.41□□□□□ -1.06
PRDM4-201ENST00000228437 ASB16-AS1Q495Z4 193 aa8.39□□□□□ -1.07
PRDM4-201ENST00000228437 SPINT4Q6UDR6 99 aa8.38□□□□□ -1.07
PRDM4-201ENST00000228437 A0A0D9SG42 100 aa8.36□□□□□ -1.07
PRDM4-201ENST00000228437 A0A1B0GU33 70 aa8.34□□□□□ -1.08
PRDM4-201ENST00000228437 Q6ZRN7 208 aaPredicted RBP8.31□□□□□ -1.08
PRDM4-201ENST00000228437 SMR3BP02814 79 aaPredicted RBP8.27□□□□□ -1.09
PRDM4-201ENST00000228437 KRTAP10-2P60368 255 aa8.23□□□□□ -1.09
PRDM4-201ENST00000228437 KRTAP13-2Q52LG2 175 aa8.2□□□□□ -1.1
PRDM4-201ENST00000228437 LINC00304Q8N9R0 145 aa8.2□□□□□ -1.1
PRDM4-201ENST00000228437 KRTAP13-3Q3SY46 172 aa8.19□□□□□ -1.1
PRDM4-201ENST00000228437 DNAH10Q8IVF4 4471 aa8.18□□□□□ -1.1
PRDM4-201ENST00000228437 KRTAP25-1Q3LHN0 102 aa8.16□□□□□ -1.1
PRDM4-201ENST00000228437 MEGF8Q7Z7M0 2845 aa8.14□□□□□ -1.11
PRDM4-201ENST00000228437 Q6ZSA8 131 aa8.13□□□□□ -1.11
PRDM4-201ENST00000228437 KRTAP10-1P60331 282 aa8.11□□□□□ -1.11
PRDM4-201ENST00000228437 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
PRDM4-201ENST00000228437 H0YAA0 97 aa8.09□□□□□ -1.11
PRDM4-201ENST00000228437 ROMO1P60602 79 aa8.09□□□□□ -1.11
PRDM4-201ENST00000228437 A8MUU9 505 aa8.06□□□□□ -1.12
PRDM4-201ENST00000228437 KRTAP16-1A8MUX0 517 aa8.01□□□□□ -1.13
PRDM4-201ENST00000228437 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
PRDM4-201ENST00000228437 RPL37P61927 97 aaKnown RBP7.94□□□□□ -1.14
PRDM4-201ENST00000228437 HUWE1Q7Z6Z7 4374 aaKnown RBP7.93□□□□□ -1.14
PRDM4-201ENST00000228437 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
PRDM4-201ENST00000228437 ANK2Q01484 3957 aa7.93□□□□□ -1.14
PRDM4-201ENST00000228437 NDUFAF8A1L188 74 aa7.9□□□□□ -1.14
PRDM4-201ENST00000228437 LYSTQ99698 3801 aa7.89□□□□□ -1.15
PRDM4-201ENST00000228437 KRTAP1-4P0C5Y4 121 aa7.88□□□□□ -1.15
PRDM4-201ENST00000228437 DNAH9Q9NYC9 4486 aa7.8□□□□□ -1.16
PRDM4-201ENST00000228437 PLECQ15149 4684 aaKnown RBP7.74□□□□□ -1.17
PRDM4-201ENST00000228437 S4R3F8 94 aa7.74□□□□□ -1.17
PRDM4-201ENST00000228437 KRTAP3-1Q9BYR8 98 aa7.72□□□□□ -1.17
PRDM4-201ENST00000228437 P0C880 135 aa7.7□□□□□ -1.18
PRDM4-201ENST00000228437 DNAH8Q96JB1 4490 aa7.68□□□□□ -1.18
PRDM4-201ENST00000228437 FRAS1Q86XX4 4008 aa7.67□□□□□ -1.18
PRDM4-201ENST00000228437 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.19
PRDM4-201ENST00000228437 J3QL48 77 aa7.64□□□□□ -1.19
PRDM4-201ENST00000228437 TPRXLQ17RH7 258 aa7.62□□□□□ -1.19
PRDM4-201ENST00000228437 DNHD1Q96M86 4753 aa7.61□□□□□ -1.19
PRDM4-201ENST00000228437 DNAH1Q9P2D7 4330 aa7.61□□□□□ -1.19
PRDM4-201ENST00000228437 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
PRDM4-201ENST00000228437 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
PRDM4-201ENST00000228437 DNAH17Q9UFH2 4485 aa7.55□□□□□ -1.2
PRDM4-201ENST00000228437 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
PRDM4-201ENST00000228437 ALMS1Q8TCU4 4167 aa7.49□□□□□ -1.21
PRDM4-201ENST00000228437 M0QZ58 72 aa7.49□□□□□ -1.21
PRDM4-201ENST00000228437 RPS29P62273 56 aaKnown RBP7.49□□□□□ -1.21
PRDM4-201ENST00000228437 CMYA5Q8N3K9 4069 aa7.48□□□□□ -1.21
PRDM4-201ENST00000228437 STARD9Q9P2P6 4700 aa7.47□□□□□ -1.21
PRDM4-201ENST00000228437 R4GN34 69 aa7.47□□□□□ -1.21
PRDM4-201ENST00000228437 KRTAP21-3Q3LHN1 58 aa7.47□□□□□ -1.21
PRDM4-201ENST00000228437 KMT2AQ03164 3969 aa7.46□□□□□ -1.21
PRDM4-201ENST00000228437 KRTAP12-2P59991 146 aa7.45□□□□□ -1.22
PRDM4-201ENST00000228437 LRP1BQ9NZR2 4599 aa7.44□□□□□ -1.22
PRDM4-201ENST00000228437 LUZP6Q538Z0 58 aa7.43□□□□□ -1.22
PRDM4-201ENST00000228437 KRTAP10-6P60371 365 aaPredicted RBP7.42□□□□□ -1.22
PRDM4-201ENST00000228437 Q5VSD8 79 aa7.42□□□□□ -1.22
PRDM4-201ENST00000228437 KRTAP10-8P60410 259 aa7.38□□□□□ -1.23
PRDM4-201ENST00000228437 CAMK2N1Q7Z7J9 78 aa7.37□□□□□ -1.23
PRDM4-201ENST00000228437 DNAH2Q9P225 4427 aa7.37□□□□□ -1.23
PRDM4-201ENST00000228437 PRKDCP78527 4128 aaKnown RBP7.32□□□□□ -1.24
PRDM4-201ENST00000228437 VPS13DQ5THJ4 4388 aa7.31□□□□□ -1.24
PRDM4-201ENST00000228437 DNAH6Q9C0G6 4158 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms