RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
TGFB1-201ENST00000221930 LINC01558Q9Y6Z2 57 aa9.29□□□□□ -0.92
TGFB1-201ENST00000221930 FBN3Q75N90 2809 aa9.28□□□□□ -0.92
TGFB1-201ENST00000221930 Q6ZR54 194 aa9.26□□□□□ -0.93
TGFB1-201ENST00000221930 COA5Q86WW8 74 aa9.26□□□□□ -0.93
TGFB1-201ENST00000221930 A0A087WTM6 91 aa9.25□□□□□ -0.93
TGFB1-201ENST00000221930 DNAH8Q96JB1 4490 aa9.25□□□□□ -0.93
TGFB1-201ENST00000221930 H0Y9P7 68 aa9.24□□□□□ -0.93
TGFB1-201ENST00000221930 PRAC1Q96KF2 57 aa9.24□□□□□ -0.93
TGFB1-201ENST00000221930 ANAPC11Q9NYG5 84 aa9.24□□□□□ -0.93
TGFB1-201ENST00000221930 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
TGFB1-201ENST00000221930 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.93
TGFB1-201ENST00000221930 ASB16-AS1Q495Z4 193 aa9.21□□□□□ -0.93
TGFB1-201ENST00000221930 PSORS1C2Q9UIG4 136 aa9.21□□□□□ -0.93
TGFB1-201ENST00000221930 RTL8CO15255 209 aa9.21□□□□□ -0.94
TGFB1-201ENST00000221930 DNAH17Q9UFH2 4485 aa9.21□□□□□ -0.94
TGFB1-201ENST00000221930 Q96NJ1 140 aa9.2□□□□□ -0.94
TGFB1-201ENST00000221930 SPINK7P58062 85 aa9.2□□□□□ -0.94
TGFB1-201ENST00000221930 IGLV7-46A0A075B6I9 117 aa9.17□□□□□ -0.94
TGFB1-201ENST00000221930 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
TGFB1-201ENST00000221930 A0A087X002 238 aa9.16□□□□□ -0.94
TGFB1-201ENST00000221930 IGLV5-52A0A0A0MRZ9 124 aa9.16□□□□□ -0.94
TGFB1-201ENST00000221930 WWC2-AS2Q96NR7 200 aa9.16□□□□□ -0.94
TGFB1-201ENST00000221930 DNAH6Q9C0G6 4158 aa9.16□□□□□ -0.94
TGFB1-201ENST00000221930 SPAG11AQ6PDA7 123 aa9.14□□□□□ -0.95
TGFB1-201ENST00000221930 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
TGFB1-201ENST00000221930 C1orf134Q5TEV5 83 aa9.12□□□□□ -0.95
TGFB1-201ENST00000221930 ADM2Q7Z4H4 148 aa9.12□□□□□ -0.95
TGFB1-201ENST00000221930 ZNF861PO60384 105 aa9.12□□□□□ -0.95
TGFB1-201ENST00000221930 ZNF706Q9Y5V0 76 aaPredicted RBP9.12□□□□□ -0.95
TGFB1-201ENST00000221930 C8orf17Q9NRJ1 99 aa9.1□□□□□ -0.95
TGFB1-201ENST00000221930 PCOTHQ58A44 107 aa9.08□□□□□ -0.96
TGFB1-201ENST00000221930 NOTCH2NLQ7Z3S9 236 aa9.08□□□□□ -0.96
TGFB1-201ENST00000221930 A0A1B0GVX0 72 aa9.07□□□□□ -0.96
TGFB1-201ENST00000221930 ALMS1Q8TCU4 4167 aa9.06□□□□□ -0.96
TGFB1-201ENST00000221930 DNAH11Q96DT5 4516 aa9.05□□□□□ -0.96
TGFB1-201ENST00000221930 CDK2AP2O75956 126 aa9.05□□□□□ -0.96
TGFB1-201ENST00000221930 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
TGFB1-201ENST00000221930 DNAH5Q8TE73 4624 aa9.03□□□□□ -0.96
TGFB1-201ENST00000221930 LY6G6CO95867 125 aa9.02□□□□□ -0.96
TGFB1-201ENST00000221930 TP53AIP1Q9HCN2 124 aa9.02□□□□□ -0.96
TGFB1-201ENST00000221930 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
TGFB1-201ENST00000221930 IGLV7-43P04211 117 aa9.01□□□□□ -0.97
TGFB1-201ENST00000221930 RETNLBQ9BQ08 111 aa9.01□□□□□ -0.97
TGFB1-201ENST00000221930 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
TGFB1-201ENST00000221930 HYDINQ4G0P3 5121 aa8.98□□□□□ -0.97
TGFB1-201ENST00000221930 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
TGFB1-201ENST00000221930 LRP1BQ9NZR2 4599 aa8.95□□□□□ -0.98
TGFB1-201ENST00000221930 HRES1P13985 223 aa8.94□□□□□ -0.98
TGFB1-201ENST00000221930 Q5W150 140 aa8.91□□□□□ -0.98
TGFB1-201ENST00000221930 Q6ZSA8 131 aa8.9□□□□□ -0.99
TGFB1-201ENST00000221930 CSAG1Q6PB30 78 aa8.89□□□□□ -0.99
TGFB1-201ENST00000221930 PKD1P98161 4303 aa8.89□□□□□ -0.99
TGFB1-201ENST00000221930 SPATA8Q6RVD6 105 aa8.87□□□□□ -0.99
TGFB1-201ENST00000221930 VPS13BQ7Z7G8 4022 aa8.85□□□□□ -0.99
TGFB1-201ENST00000221930 SSBP3-AS1Q7Z2R9 100 aa8.85□□□□□ -0.99
TGFB1-201ENST00000221930 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
TGFB1-201ENST00000221930 KRTAP13-2Q52LG2 175 aa8.83□□□□□ -1
TGFB1-201ENST00000221930 KRTAP10-1P60331 282 aa8.82□□□□□ -1
TGFB1-201ENST00000221930 KRTAP13-3Q3SY46 172 aa8.82□□□□□ -1
TGFB1-201ENST00000221930 PKHD1P08F94 4074 aa8.75□□□□□ -1.01
TGFB1-201ENST00000221930 ROMO1P60602 79 aa8.73□□□□□ -1.01
TGFB1-201ENST00000221930 MIR22HGQ0VDD5 57 aa8.73□□□□□ -1.01
TGFB1-201ENST00000221930 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
TGFB1-201ENST00000221930 A0A1B0GU69 56 aa8.7□□□□□ -1.02
TGFB1-201ENST00000221930 UQCR11O14957 56 aa8.69□□□□□ -1.02
TGFB1-201ENST00000221930 FAM229AH3BQW9 127 aa8.67□□□□□ -1.02
TGFB1-201ENST00000221930 ACYP2P14621 99 aa8.67□□□□□ -1.02
TGFB1-201ENST00000221930 KRTAP16-1A8MUX0 517 aa8.65□□□□□ -1.03
TGFB1-201ENST00000221930 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
TGFB1-201ENST00000221930 DMAC1Q96GE9 116 aa8.61□□□□□ -1.03
TGFB1-201ENST00000221930 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
TGFB1-201ENST00000221930 IGKV2D-30A0A075B6S6 120 aa8.6□□□□□ -1.03
TGFB1-201ENST00000221930 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
TGFB1-201ENST00000221930 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
TGFB1-201ENST00000221930 SACSQ9NZJ4 4579 aa8.56□□□□□ -1.04
TGFB1-201ENST00000221930 KMT2CQ8NEZ4 4911 aaKnown RBP8.55□□□□□ -1.04
TGFB1-201ENST00000221930 FAT1Q14517 4588 aa8.53□□□□□ -1.04
TGFB1-201ENST00000221930 SPINK1P00995 79 aa8.53□□□□□ -1.04
TGFB1-201ENST00000221930 RPS29P62273 56 aaKnown RBP8.52□□□□□ -1.05
TGFB1-201ENST00000221930 SMR3BP02814 79 aaPredicted RBP8.51□□□□□ -1.05
TGFB1-201ENST00000221930 DYNC1H1Q14204 4646 aaKnown RBP8.51□□□□□ -1.05
TGFB1-201ENST00000221930 P0C880 135 aa8.48□□□□□ -1.05
TGFB1-201ENST00000221930 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
TGFB1-201ENST00000221930 A0A0A0MQY5 61 aa8.46□□□□□ -1.05
TGFB1-201ENST00000221930 Q8N1X5 172 aa8.4□□□□□ -1.06
TGFB1-201ENST00000221930 A8MUU9 505 aa8.39□□□□□ -1.07
TGFB1-201ENST00000221930 C9orf92A6NGG3 77 aa8.39□□□□□ -1.07
TGFB1-201ENST00000221930 APOBP04114 4563 aaKnown RBP8.38□□□□□ -1.07
TGFB1-201ENST00000221930 KRTAP10-4P60372 401 aaPredicted RBP8.38□□□□□ -1.07
TGFB1-201ENST00000221930 PKHD1L1Q86WI1 4243 aa8.32□□□□□ -1.08
TGFB1-201ENST00000221930 RYR2Q92736 4967 aa8.3□□□□□ -1.08
TGFB1-201ENST00000221930 FLG2Q5D862 2391 aaPredicted RBP8.25□□□□□ -1.09
TGFB1-201ENST00000221930 LRP1Q07954 4544 aaKnown RBP8.25□□□□□ -1.09
TGFB1-201ENST00000221930 RYR3Q15413 4870 aa8.25□□□□□ -1.09
TGFB1-201ENST00000221930 C20orf166-AS1Q96NR2 134 aa8.24□□□□□ -1.09
TGFB1-201ENST00000221930 KRTAP3-1Q9BYR8 98 aa8.19□□□□□ -1.1
TGFB1-201ENST00000221930 H0YAA0 97 aa8.18□□□□□ -1.1
TGFB1-201ENST00000221930 MYCBP2O75592 4640 aa8.17□□□□□ -1.1
TGFB1-201ENST00000221930 DMBT1Q9UGM3 2413 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms