RNA–Protein interactions for RNA: ENST00000218200.12

FMR1-201, Transcript of fragile X mental retardation 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FMR1, Length 4,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-201ENST00000218200 LINC00472Q9H8W2 130 aa12.72□□□□□ -0.37
FMR1-201ENST00000218200 PKD1L1Q8TDX9 2849 aa12.67□□□□□ -0.38
FMR1-201ENST00000218200 Q75L30 129 aa12.67□□□□□ -0.38
FMR1-201ENST00000218200 WWC2-AS2Q96NR7 200 aa12.66□□□□□ -0.38
FMR1-201ENST00000218200 ZFHX3Q15911 3703 aa12.62□□□□□ -0.39
FMR1-201ENST00000218200 LINC01554Q52M75 96 aa12.61□□□□□ -0.39
FMR1-201ENST00000218200 CRIPTQ9P021 101 aa12.6□□□□□ -0.39
FMR1-201ENST00000218200 LINC01558Q9Y6Z2 57 aa12.6□□□□□ -0.39
FMR1-201ENST00000218200 PANO1I0J062 215 aa12.58□□□□□ -0.39
FMR1-201ENST00000218200 A8MU10 97 aa12.53□□□□□ -0.4
FMR1-201ENST00000218200 KRTAP4-16G5E9R7 235 aaPredicted RBP12.53□□□□□ -0.4
FMR1-201ENST00000218200 FBN1P35555 2871 aaKnown RBP12.53□□□□□ -0.4
FMR1-201ENST00000218200 Q5W150 140 aa12.49□□□□□ -0.41
FMR1-201ENST00000218200 SPRR1BP22528 89 aa12.47□□□□□ -0.41
FMR1-201ENST00000218200 A0A087X002 238 aa12.46□□□□□ -0.41
FMR1-201ENST00000218200 NOTCH2NLQ7Z3S9 236 aa12.46□□□□□ -0.41
FMR1-201ENST00000218200 A0A1B0GU33 70 aa12.45□□□□□ -0.42
FMR1-201ENST00000218200 CSAG1Q6PB30 78 aa12.44□□□□□ -0.42
FMR1-201ENST00000218200 KRTAP11-1Q8IUC1 163 aa12.44□□□□□ -0.42
FMR1-201ENST00000218200 KRTAP29-1A8MX34 341 aaPredicted RBP12.42□□□□□ -0.42
FMR1-201ENST00000218200 KRTAP7-1Q8IUC3 87 aa12.42□□□□□ -0.42
FMR1-201ENST00000218200 ZCCHC13Q8WW36 166 aaKnown RBP12.42□□□□□ -0.42
FMR1-201ENST00000218200 ANK3Q12955 4377 aaKnown RBP12.4□□□□□ -0.42
FMR1-201ENST00000218200 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
FMR1-201ENST00000218200 SRRM2Q9UQ35 2752 aaKnown RBP12.37□□□□□ -0.43
FMR1-201ENST00000218200 PLAC8Q9NZF1 115 aa12.35□□□□□ -0.43
FMR1-201ENST00000218200 TRRAPQ9Y4A5 3859 aa12.32□□□□□ -0.44
FMR1-201ENST00000218200 H3BS24 57 aa12.3□□□□□ -0.44
FMR1-201ENST00000218200 COX6B2Q6YFQ2 88 aa12.25□□□□□ -0.45
FMR1-201ENST00000218200 KRTAP10-2P60368 255 aa12.23□□□□□ -0.45
FMR1-201ENST00000218200 TGP01266 2768 aa12.21□□□□□ -0.46
FMR1-201ENST00000218200 ADM2Q7Z4H4 148 aa12.17□□□□□ -0.46
FMR1-201ENST00000218200 Q6ZR54 194 aa12.17□□□□□ -0.46
FMR1-201ENST00000218200 Q6ZRN7 208 aaPredicted RBP12.15□□□□□ -0.47
FMR1-201ENST00000218200 DMAC1Q96GE9 116 aa12.14□□□□□ -0.47
FMR1-201ENST00000218200 KRTAP10-1P60331 282 aa12.14□□□□□ -0.47
FMR1-201ENST00000218200 TENM2Q9NT68 2774 aa12.13□□□□□ -0.47
FMR1-201ENST00000218200 J3QL48 77 aa12.12□□□□□ -0.47
FMR1-201ENST00000218200 SPATA8Q6RVD6 105 aa12.1□□□□□ -0.47
FMR1-201ENST00000218200 LCE6AA0A183 80 aa12.05□□□□□ -0.48
FMR1-201ENST00000218200 LINC00483Q53H64 154 aa12.03□□□□□ -0.48
FMR1-201ENST00000218200 Q6ZSA8 131 aa11.99□□□□□ -0.49
FMR1-201ENST00000218200 AKAP9Q99996 3911 aa11.98□□□□□ -0.49
FMR1-201ENST00000218200 A6NN06 94 aa11.97□□□□□ -0.49
FMR1-201ENST00000218200 KRTAP13-1Q8IUC0 172 aa11.93□□□□□ -0.5
FMR1-201ENST00000218200 CAMK2N1Q7Z7J9 78 aa11.92□□□□□ -0.5
FMR1-201ENST00000218200 RPL37P61927 97 aaKnown RBP11.86□□□□□ -0.51
FMR1-201ENST00000218200 LUZP6Q538Z0 58 aa11.85□□□□□ -0.51
FMR1-201ENST00000218200 H1FX-AS1Q4G0G2 97 aa11.85□□□□□ -0.51
FMR1-201ENST00000218200 S4R3F8 94 aa11.85□□□□□ -0.51
FMR1-201ENST00000218200 KRTAP13-2Q52LG2 175 aa11.77□□□□□ -0.53
FMR1-201ENST00000218200 R4GN34 69 aa11.75□□□□□ -0.53
FMR1-201ENST00000218200 ROMO1P60602 79 aa11.74□□□□□ -0.53
FMR1-201ENST00000218200 FBN3Q75N90 2809 aa11.7□□□□□ -0.54
FMR1-201ENST00000218200 M0QZ58 72 aa11.61□□□□□ -0.55
FMR1-201ENST00000218200 Q5VSD8 79 aa11.59□□□□□ -0.55
FMR1-201ENST00000218200 COL7A1Q02388 2944 aa11.58□□□□□ -0.56
FMR1-201ENST00000218200 KRTAP25-1Q3LHN0 102 aa11.55□□□□□ -0.56
FMR1-201ENST00000218200 ASB16-AS1Q495Z4 193 aa11.51□□□□□ -0.57
FMR1-201ENST00000218200 M0R2T5 61 aa11.51□□□□□ -0.57
FMR1-201ENST00000218200 NDUFAF8A1L188 74 aa11.41□□□□□ -0.58
FMR1-201ENST00000218200 MEGF8Q7Z7M0 2845 aa11.4□□□□□ -0.58
FMR1-201ENST00000218200 HUWE1Q7Z6Z7 4374 aaKnown RBP11.36□□□□□ -0.59
FMR1-201ENST00000218200 CSMD3Q7Z407 3707 aa11.31□□□□□ -0.6
FMR1-201ENST00000218200 A8MUU9 505 aa11.3□□□□□ -0.6
FMR1-201ENST00000218200 C10orf95Q9H7T3 257 aa11.29□□□□□ -0.6
FMR1-201ENST00000218200 KRTAP1-4P0C5Y4 121 aa11.29□□□□□ -0.6
FMR1-201ENST00000218200 A0A0A0MQY5 61 aa11.26□□□□□ -0.61
FMR1-201ENST00000218200 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
FMR1-201ENST00000218200 KRTAP21-3Q3LHN1 58 aa11.21□□□□□ -0.61
FMR1-201ENST00000218200 H0YAA0 97 aa11.2□□□□□ -0.62
FMR1-201ENST00000218200 RPS29P62273 56 aaKnown RBP11.14□□□□□ -0.63
FMR1-201ENST00000218200 KRTAP16-1A8MUX0 517 aa11.13□□□□□ -0.63
FMR1-201ENST00000218200 C20orf166-AS1Q96NR2 134 aa11.06□□□□□ -0.64
FMR1-201ENST00000218200 DNAH9Q9NYC9 4486 aa11.03□□□□□ -0.64
FMR1-201ENST00000218200 KRTAP13-3Q3SY46 172 aa10.95□□□□□ -0.66
FMR1-201ENST00000218200 DNAH10Q8IVF4 4471 aa10.93□□□□□ -0.66
FMR1-201ENST00000218200 ANK2Q01484 3957 aa10.9□□□□□ -0.66
FMR1-201ENST00000218200 PLECQ15149 4684 aaKnown RBP10.9□□□□□ -0.66
FMR1-201ENST00000218200 P0C880 135 aa10.9□□□□□ -0.67
FMR1-201ENST00000218200 PLAC4Q8WY50 150 aa10.88□□□□□ -0.67
FMR1-201ENST00000218200 XP32Q5T750 250 aa10.81□□□□□ -0.68
FMR1-201ENST00000218200 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
FMR1-201ENST00000218200 KRTAP10-8P60410 259 aa10.72□□□□□ -0.69
FMR1-201ENST00000218200 DNAH1Q9P2D7 4330 aa10.71□□□□□ -0.69
FMR1-201ENST00000218200 STARD9Q9P2P6 4700 aa10.64□□□□□ -0.71
FMR1-201ENST00000218200 CMYA5Q8N3K9 4069 aa10.62□□□□□ -0.71
FMR1-201ENST00000218200 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
FMR1-201ENST00000218200 TNP1P09430 55 aa10.58□□□□□ -0.72
FMR1-201ENST00000218200 VPS13DQ5THJ4 4388 aa10.58□□□□□ -0.72
FMR1-201ENST00000218200 PRKDCP78527 4128 aaKnown RBP10.57□□□□□ -0.72
FMR1-201ENST00000218200 DNAH11Q96DT5 4516 aa10.54□□□□□ -0.72
FMR1-201ENST00000218200 LYSTQ99698 3801 aa10.52□□□□□ -0.72
FMR1-201ENST00000218200 DNHD1Q96M86 4753 aa10.51□□□□□ -0.73
FMR1-201ENST00000218200 KRTAP3-1Q9BYR8 98 aa10.49□□□□□ -0.73
FMR1-201ENST00000218200 KRTAP12-2P59991 146 aa10.44□□□□□ -0.74
FMR1-201ENST00000218200 DNAH17Q9UFH2 4485 aa10.42□□□□□ -0.74
FMR1-201ENST00000218200 KMT2AQ03164 3969 aa10.42□□□□□ -0.74
FMR1-201ENST00000218200 TPRXLQ17RH7 258 aa10.39□□□□□ -0.75
FMR1-201ENST00000218200 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms