RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 PRR26Q8N8Z3 221 aa7.36□□□□□ -1.23
TM9SF4-201ENST00000217315 CD164Q04900 197 aa7.36□□□□□ -1.23
TM9SF4-201ENST00000217315 KRTAP13-1Q8IUC0 172 aa7.35□□□□□ -1.23
TM9SF4-201ENST00000217315 LINC00304Q8N9R0 145 aa7.35□□□□□ -1.23
TM9SF4-201ENST00000217315 KRTAP10-1P60331 282 aa7.33□□□□□ -1.24
TM9SF4-201ENST00000217315 AKAP9Q99996 3911 aa7.33□□□□□ -1.24
TM9SF4-201ENST00000217315 A0A087X002 238 aa7.32□□□□□ -1.24
TM9SF4-201ENST00000217315 NOTCH2NLQ7Z3S9 236 aa7.32□□□□□ -1.24
TM9SF4-201ENST00000217315 Q8N9P0 234 aaPredicted RBP7.32□□□□□ -1.24
TM9SF4-201ENST00000217315 LCE6AA0A183 80 aa7.31□□□□□ -1.24
TM9SF4-201ENST00000217315 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
TM9SF4-201ENST00000217315 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
TM9SF4-201ENST00000217315 DMBT1Q9UGM3 2413 aaPredicted RBP7.28□□□□□ -1.24
TM9SF4-201ENST00000217315 HRES1P13985 223 aa7.27□□□□□ -1.25
TM9SF4-201ENST00000217315 Q8N1X5 172 aa7.23□□□□□ -1.25
TM9SF4-201ENST00000217315 Q5W150 140 aa7.22□□□□□ -1.25
TM9SF4-201ENST00000217315 Q5VV11 94 aa7.22□□□□□ -1.25
TM9SF4-201ENST00000217315 ATP11AUNQ6ZP68 121 aa7.21□□□□□ -1.25
TM9SF4-201ENST00000217315 K7ERS5 55 aa7.18□□□□□ -1.26
TM9SF4-201ENST00000217315 UQCR11O14957 56 aa7.16□□□□□ -1.26
TM9SF4-201ENST00000217315 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
TM9SF4-201ENST00000217315 Q75L30 129 aa7.16□□□□□ -1.26
TM9SF4-201ENST00000217315 FBN3Q75N90 2809 aa7.15□□□□□ -1.26
TM9SF4-201ENST00000217315 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.27
TM9SF4-201ENST00000217315 KRTAP13-2Q52LG2 175 aa7.14□□□□□ -1.27
TM9SF4-201ENST00000217315 FLG2Q5D862 2391 aaPredicted RBP7.12□□□□□ -1.27
TM9SF4-201ENST00000217315 MIR22HGQ0VDD5 57 aa7.11□□□□□ -1.27
TM9SF4-201ENST00000217315 SPINK7P58062 85 aa7.1□□□□□ -1.27
TM9SF4-201ENST00000217315 COL7A1Q02388 2944 aa7.08□□□□□ -1.28
TM9SF4-201ENST00000217315 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
TM9SF4-201ENST00000217315 MEGF8Q7Z7M0 2845 aa7.06□□□□□ -1.28
TM9SF4-201ENST00000217315 CSMD3Q7Z407 3707 aa7.06□□□□□ -1.28
TM9SF4-201ENST00000217315 DMAC1Q96GE9 116 aa7.06□□□□□ -1.28
TM9SF4-201ENST00000217315 KTN1-AS1Q86SY8 53 aa7.04□□□□□ -1.28
TM9SF4-201ENST00000217315 A8MU10 97 aa7.03□□□□□ -1.28
TM9SF4-201ENST00000217315 LCA10Q71F78 164 aa7□□□□□ -1.29
TM9SF4-201ENST00000217315 Q6ZSA8 131 aa6.99□□□□□ -1.29
TM9SF4-201ENST00000217315 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
TM9SF4-201ENST00000217315 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
TM9SF4-201ENST00000217315 A0A1B0GU33 70 aa6.88□□□□□ -1.31
TM9SF4-201ENST00000217315 Q5VSD8 79 aa6.88□□□□□ -1.31
TM9SF4-201ENST00000217315 PRAC1Q96KF2 57 aa6.86□□□□□ -1.31
TM9SF4-201ENST00000217315 A0A0D9SG42 100 aa6.84□□□□□ -1.32
TM9SF4-201ENST00000217315 RBM12B-AS1Q9P1G2 102 aa6.84□□□□□ -1.32
TM9SF4-201ENST00000217315 RPS29P62273 56 aaKnown RBP6.83□□□□□ -1.32
TM9SF4-201ENST00000217315 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
TM9SF4-201ENST00000217315 KRTAP21-3Q3LHN1 58 aa6.79□□□□□ -1.32
TM9SF4-201ENST00000217315 J3QL48 77 aa6.77□□□□□ -1.33
TM9SF4-201ENST00000217315 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
TM9SF4-201ENST00000217315 COX6B2Q6YFQ2 88 aa6.76□□□□□ -1.33
TM9SF4-201ENST00000217315 A6NN06 94 aa6.76□□□□□ -1.33
TM9SF4-201ENST00000217315 SPATA8Q6RVD6 105 aa6.75□□□□□ -1.33
TM9SF4-201ENST00000217315 DNAH9Q9NYC9 4486 aa6.74□□□□□ -1.33
TM9SF4-201ENST00000217315 DNAH10Q8IVF4 4471 aa6.73□□□□□ -1.33
TM9SF4-201ENST00000217315 A8MUU9 505 aa6.72□□□□□ -1.33
TM9SF4-201ENST00000217315 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
TM9SF4-201ENST00000217315 ANK2Q01484 3957 aa6.7□□□□□ -1.34
TM9SF4-201ENST00000217315 S4R3F8 94 aa6.69□□□□□ -1.34
TM9SF4-201ENST00000217315 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
TM9SF4-201ENST00000217315 H1FX-AS1Q4G0G2 97 aa6.68□□□□□ -1.34
TM9SF4-201ENST00000217315 PLECQ15149 4684 aaKnown RBP6.68□□□□□ -1.34
TM9SF4-201ENST00000217315 CSAG1Q6PB30 78 aa6.67□□□□□ -1.34
TM9SF4-201ENST00000217315 LINC01554Q52M75 96 aa6.67□□□□□ -1.34
TM9SF4-201ENST00000217315 ADM2Q7Z4H4 148 aa6.65□□□□□ -1.34
TM9SF4-201ENST00000217315 CRIPTQ9P021 101 aa6.64□□□□□ -1.35
TM9SF4-201ENST00000217315 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
TM9SF4-201ENST00000217315 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
TM9SF4-201ENST00000217315 DNAH1Q9P2D7 4330 aa6.56□□□□□ -1.36
TM9SF4-201ENST00000217315 STARD9Q9P2P6 4700 aa6.53□□□□□ -1.36
TM9SF4-201ENST00000217315 XP32Q5T750 250 aa6.5□□□□□ -1.37
TM9SF4-201ENST00000217315 PRKDCP78527 4128 aaKnown RBP6.5□□□□□ -1.37
TM9SF4-201ENST00000217315 DNAH11Q96DT5 4516 aa6.49□□□□□ -1.37
TM9SF4-201ENST00000217315 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
TM9SF4-201ENST00000217315 LYSTQ99698 3801 aa6.48□□□□□ -1.37
TM9SF4-201ENST00000217315 H0YAA0 97 aa6.47□□□□□ -1.37
TM9SF4-201ENST00000217315 SEC61BP60468 96 aaKnown RBP6.47□□□□□ -1.37
TM9SF4-201ENST00000217315 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.38
TM9SF4-201ENST00000217315 ROMO1P60602 79 aa6.45□□□□□ -1.38
TM9SF4-201ENST00000217315 R4GN34 69 aa6.45□□□□□ -1.38
TM9SF4-201ENST00000217315 KRTAP10-8P60410 259 aa6.43□□□□□ -1.38
TM9SF4-201ENST00000217315 DNAH3Q8TD57 4116 aa6.43□□□□□ -1.38
TM9SF4-201ENST00000217315 CMYA5Q8N3K9 4069 aa6.42□□□□□ -1.38
TM9SF4-201ENST00000217315 KMT2AQ03164 3969 aa6.41□□□□□ -1.38
TM9SF4-201ENST00000217315 M0QZ58 72 aa6.4□□□□□ -1.39
TM9SF4-201ENST00000217315 KRTAP3-1Q9BYR8 98 aa6.4□□□□□ -1.39
TM9SF4-201ENST00000217315 DNAH17Q9UFH2 4485 aa6.36□□□□□ -1.39
TM9SF4-201ENST00000217315 KRTAP25-1Q3LHN0 102 aa6.35□□□□□ -1.39
TM9SF4-201ENST00000217315 CAMK2N1Q7Z7J9 78 aa6.34□□□□□ -1.39
TM9SF4-201ENST00000217315 DNAH5Q8TE73 4624 aa6.33□□□□□ -1.4
TM9SF4-201ENST00000217315 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
TM9SF4-201ENST00000217315 LRP1BQ9NZR2 4599 aa6.32□□□□□ -1.4
TM9SF4-201ENST00000217315 DNAH7Q8WXX0 4024 aa6.32□□□□□ -1.4
TM9SF4-201ENST00000217315 KRTAP10-4P60372 401 aaPredicted RBP6.32□□□□□ -1.4
TM9SF4-201ENST00000217315 P0C880 135 aa6.29□□□□□ -1.4
TM9SF4-201ENST00000217315 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
TM9SF4-201ENST00000217315 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
TM9SF4-201ENST00000217315 FAT1Q14517 4588 aa6.26□□□□□ -1.41
TM9SF4-201ENST00000217315 M0R2T5 61 aa6.23□□□□□ -1.41
TM9SF4-201ENST00000217315 FRAS1Q86XX4 4008 aa6.23□□□□□ -1.41
TM9SF4-201ENST00000217315 DYNC2H1Q8NCM8 4307 aaKnown RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms