RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 KRTAP10-2P60368 255 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 CD164Q04900 197 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 NOTCH2NLQ7Z3S9 236 aa5.83□□□□□ -1.48
CSTF1-201ENST00000217109 IGLV7-46A0A075B6I9 117 aa5.82□□□□□ -1.48
CSTF1-201ENST00000217109 C7orf65Q6ZTY9 151 aa5.82□□□□□ -1.48
CSTF1-201ENST00000217109 LCE6AA0A183 80 aa5.8□□□□□ -1.48
CSTF1-201ENST00000217109 Q6ZR54 194 aa5.8□□□□□ -1.48
CSTF1-201ENST00000217109 KRTAP13-1Q8IUC0 172 aa5.8□□□□□ -1.48
CSTF1-201ENST00000217109 Q8N9P0 234 aaPredicted RBP5.8□□□□□ -1.48
CSTF1-201ENST00000217109 A0A1B0GU69 56 aa5.79□□□□□ -1.48
CSTF1-201ENST00000217109 LINC00483Q53H64 154 aa5.79□□□□□ -1.48
CSTF1-201ENST00000217109 FBN3Q75N90 2809 aa5.76□□□□□ -1.49
CSTF1-201ENST00000217109 KRTAP10-1P60331 282 aa5.76□□□□□ -1.49
CSTF1-201ENST00000217109 C9orf92A6NGG3 77 aa5.75□□□□□ -1.49
CSTF1-201ENST00000217109 HRES1P13985 223 aa5.74□□□□□ -1.49
CSTF1-201ENST00000217109 Q5VV11 94 aa5.74□□□□□ -1.49
CSTF1-201ENST00000217109 LINC00304Q8N9R0 145 aa5.74□□□□□ -1.49
CSTF1-201ENST00000217109 DMBT1Q9UGM3 2413 aaPredicted RBP5.73□□□□□ -1.49
CSTF1-201ENST00000217109 Q5W150 140 aa5.73□□□□□ -1.49
CSTF1-201ENST00000217109 Q8N1X5 172 aa5.71□□□□□ -1.5
CSTF1-201ENST00000217109 MEGF8Q7Z7M0 2845 aa5.69□□□□□ -1.5
CSTF1-201ENST00000217109 ATP11AUNQ6ZP68 121 aa5.68□□□□□ -1.5
CSTF1-201ENST00000217109 A8MU10 97 aa5.67□□□□□ -1.5
CSTF1-201ENST00000217109 Q75L30 129 aa5.66□□□□□ -1.5
CSTF1-201ENST00000217109 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
CSTF1-201ENST00000217109 SPINK7P58062 85 aa5.65□□□□□ -1.5
CSTF1-201ENST00000217109 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.51
CSTF1-201ENST00000217109 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
CSTF1-201ENST00000217109 UQCR11O14957 56 aa5.63□□□□□ -1.51
CSTF1-201ENST00000217109 FLG2Q5D862 2391 aaPredicted RBP5.63□□□□□ -1.51
CSTF1-201ENST00000217109 HUWE1Q7Z6Z7 4374 aaKnown RBP5.61□□□□□ -1.51
CSTF1-201ENST00000217109 MIR22HGQ0VDD5 57 aa5.61□□□□□ -1.51
CSTF1-201ENST00000217109 LCA10Q71F78 164 aa5.59□□□□□ -1.51
CSTF1-201ENST00000217109 K7ERS5 55 aa5.58□□□□□ -1.52
CSTF1-201ENST00000217109 KTN1-AS1Q86SY8 53 aa5.58□□□□□ -1.52
CSTF1-201ENST00000217109 DMAC1Q96GE9 116 aa5.57□□□□□ -1.52
CSTF1-201ENST00000217109 ANK2Q01484 3957 aa5.56□□□□□ -1.52
CSTF1-201ENST00000217109 ASB16-AS1Q495Z4 193 aa5.55□□□□□ -1.52
CSTF1-201ENST00000217109 DNAH10Q8IVF4 4471 aa5.53□□□□□ -1.52
CSTF1-201ENST00000217109 Q6ZSA8 131 aa5.49□□□□□ -1.53
CSTF1-201ENST00000217109 KRTAP1-4P0C5Y4 121 aa5.48□□□□□ -1.53
CSTF1-201ENST00000217109 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
CSTF1-201ENST00000217109 RBM12B-AS1Q9P1G2 102 aa5.45□□□□□ -1.54
CSTF1-201ENST00000217109 DNAH9Q9NYC9 4486 aa5.44□□□□□ -1.54
CSTF1-201ENST00000217109 PLECQ15149 4684 aaKnown RBP5.43□□□□□ -1.54
CSTF1-201ENST00000217109 A0A1B0GU33 70 aa5.41□□□□□ -1.54
CSTF1-201ENST00000217109 LYSTQ99698 3801 aa5.39□□□□□ -1.55
CSTF1-201ENST00000217109 A0A0D9SG42 100 aa5.39□□□□□ -1.55
CSTF1-201ENST00000217109 A6NN06 94 aa5.39□□□□□ -1.55
CSTF1-201ENST00000217109 KRTAP13-3Q3SY46 172 aa5.38□□□□□ -1.55
CSTF1-201ENST00000217109 KRTAP16-1A8MUX0 517 aa5.38□□□□□ -1.55
CSTF1-201ENST00000217109 Q5VSD8 79 aa5.36□□□□□ -1.55
CSTF1-201ENST00000217109 SPATA8Q6RVD6 105 aa5.34□□□□□ -1.55
CSTF1-201ENST00000217109 ADM2Q7Z4H4 148 aa5.34□□□□□ -1.56
CSTF1-201ENST00000217109 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
CSTF1-201ENST00000217109 DNAH1Q9P2D7 4330 aa5.32□□□□□ -1.56
CSTF1-201ENST00000217109 CSAG1Q6PB30 78 aa5.31□□□□□ -1.56
CSTF1-201ENST00000217109 STARD9Q9P2P6 4700 aa5.3□□□□□ -1.56
CSTF1-201ENST00000217109 COX6B2Q6YFQ2 88 aa5.3□□□□□ -1.56
CSTF1-201ENST00000217109 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
CSTF1-201ENST00000217109 CMYA5Q8N3K9 4069 aa5.28□□□□□ -1.56
CSTF1-201ENST00000217109 PRKDCP78527 4128 aaKnown RBP5.28□□□□□ -1.56
CSTF1-201ENST00000217109 A8MUU9 505 aa5.28□□□□□ -1.56
CSTF1-201ENST00000217109 DNAH11Q96DT5 4516 aa5.27□□□□□ -1.57
CSTF1-201ENST00000217109 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
CSTF1-201ENST00000217109 H1FX-AS1Q4G0G2 97 aa5.26□□□□□ -1.57
CSTF1-201ENST00000217109 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
CSTF1-201ENST00000217109 SPINT4Q6UDR6 99 aa5.25□□□□□ -1.57
CSTF1-201ENST00000217109 KMT2AQ03164 3969 aa5.25□□□□□ -1.57
CSTF1-201ENST00000217109 DNAH3Q8TD57 4116 aa5.24□□□□□ -1.57
CSTF1-201ENST00000217109 S4R3F8 94 aa5.24□□□□□ -1.57
CSTF1-201ENST00000217109 DNAH7Q8WXX0 4024 aa5.23□□□□□ -1.57
CSTF1-201ENST00000217109 J3QL48 77 aa5.23□□□□□ -1.57
CSTF1-201ENST00000217109 KRTAP21-3Q3LHN1 58 aa5.22□□□□□ -1.57
CSTF1-201ENST00000217109 DNHD1Q96M86 4753 aa5.22□□□□□ -1.57
CSTF1-201ENST00000217109 VPS13DQ5THJ4 4388 aa5.21□□□□□ -1.58
CSTF1-201ENST00000217109 H3BS24 57 aa5.16□□□□□ -1.58
CSTF1-201ENST00000217109 DNAH8Q96JB1 4490 aa5.16□□□□□ -1.58
CSTF1-201ENST00000217109 A0A1B0GVY2 172 aa5.15□□□□□ -1.58
CSTF1-201ENST00000217109 RPL37P61927 97 aaKnown RBP5.15□□□□□ -1.58
CSTF1-201ENST00000217109 FRAS1Q86XX4 4008 aa5.15□□□□□ -1.58
CSTF1-201ENST00000217109 H0YAA0 97 aa5.14□□□□□ -1.59
CSTF1-201ENST00000217109 LRP1BQ9NZR2 4599 aa5.14□□□□□ -1.59
CSTF1-201ENST00000217109 DNAH17Q9UFH2 4485 aa5.13□□□□□ -1.59
CSTF1-201ENST00000217109 XP32Q5T750 250 aa5.11□□□□□ -1.59
CSTF1-201ENST00000217109 DNAH2Q9P225 4427 aa5.1□□□□□ -1.59
CSTF1-201ENST00000217109 DNAH5Q8TE73 4624 aa5.1□□□□□ -1.59
CSTF1-201ENST00000217109 KRTAP3-1Q9BYR8 98 aa5.09□□□□□ -1.59
CSTF1-201ENST00000217109 ROMO1P60602 79 aa5.07□□□□□ -1.6
CSTF1-201ENST00000217109 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
CSTF1-201ENST00000217109 FAT1Q14517 4588 aa5.07□□□□□ -1.6
CSTF1-201ENST00000217109 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
CSTF1-201ENST00000217109 KRTAP10-8P60410 259 aa5.05□□□□□ -1.6
CSTF1-201ENST00000217109 R4GN34 69 aa5.04□□□□□ -1.6
CSTF1-201ENST00000217109 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
CSTF1-201ENST00000217109 M0QZ58 72 aa5.02□□□□□ -1.61
CSTF1-201ENST00000217109 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
CSTF1-201ENST00000217109 DYNC2H1Q8NCM8 4307 aaKnown RBP5□□□□□ -1.61
CSTF1-201ENST00000217109 VPS13BQ7Z7G8 4022 aa5□□□□□ -1.61
CSTF1-201ENST00000217109 KRTAP10-4P60372 401 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms