RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
APOBEC3D-201ENST00000216099 ALMS1Q8TCU4 4167 aa6.48□□□□□ -1.37
APOBEC3D-201ENST00000216099 DNHD1Q96M86 4753 aa6.48□□□□□ -1.37
APOBEC3D-201ENST00000216099 LY6G6CO95867 125 aa6.48□□□□□ -1.37
APOBEC3D-201ENST00000216099 IGFL1Q6UW32 110 aa6.47□□□□□ -1.37
APOBEC3D-201ENST00000216099 C1orf64Q8NEQ6 169 aa6.47□□□□□ -1.37
APOBEC3D-201ENST00000216099 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.37
APOBEC3D-201ENST00000216099 DNAH2Q9P225 4427 aa6.46□□□□□ -1.38
APOBEC3D-201ENST00000216099 FBN3Q75N90 2809 aa6.45□□□□□ -1.38
APOBEC3D-201ENST00000216099 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
APOBEC3D-201ENST00000216099 MOBPQ13875 183 aa6.43□□□□□ -1.38
APOBEC3D-201ENST00000216099 LCE6AA0A183 80 aa6.43□□□□□ -1.38
APOBEC3D-201ENST00000216099 A8MWP4 228 aa6.42□□□□□ -1.38
APOBEC3D-201ENST00000216099 LINC00483Q53H64 154 aa6.42□□□□□ -1.38
APOBEC3D-201ENST00000216099 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
APOBEC3D-201ENST00000216099 PSORS1C2Q9UIG4 136 aa6.41□□□□□ -1.38
APOBEC3D-201ENST00000216099 RETNLBQ9BQ08 111 aa6.41□□□□□ -1.38
APOBEC3D-201ENST00000216099 CYP4F30PQ9H0H9 118 aa6.41□□□□□ -1.38
APOBEC3D-201ENST00000216099 TGP01266 2768 aa6.4□□□□□ -1.38
APOBEC3D-201ENST00000216099 RPL37AP61513 92 aaKnown RBP6.4□□□□□ -1.39
APOBEC3D-201ENST00000216099 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
APOBEC3D-201ENST00000216099 ZCCHC13Q8WW36 166 aaKnown RBP6.39□□□□□ -1.39
APOBEC3D-201ENST00000216099 A0A0G2JQZ4 141 aa6.38□□□□□ -1.39
APOBEC3D-201ENST00000216099 DSCR10P59022 87 aa6.38□□□□□ -1.39
APOBEC3D-201ENST00000216099 ZNF861PO60384 105 aa6.38□□□□□ -1.39
APOBEC3D-201ENST00000216099 A0A1B0GVX0 72 aa6.37□□□□□ -1.39
APOBEC3D-201ENST00000216099 A0A087WSZ3 146 aa6.37□□□□□ -1.39
APOBEC3D-201ENST00000216099 LIMD2Q9BT23 127 aa6.36□□□□□ -1.39
APOBEC3D-201ENST00000216099 FRAS1Q86XX4 4008 aa6.36□□□□□ -1.39
APOBEC3D-201ENST00000216099 KRTAP10-2P60368 255 aa6.35□□□□□ -1.39
APOBEC3D-201ENST00000216099 IGLV7-43P04211 117 aa6.34□□□□□ -1.39
APOBEC3D-201ENST00000216099 Q6ZSA8 131 aa6.34□□□□□ -1.39
APOBEC3D-201ENST00000216099 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
APOBEC3D-201ENST00000216099 K7EQZ3 153 aa6.33□□□□□ -1.4
APOBEC3D-201ENST00000216099 SRRM2Q9UQ35 2752 aaKnown RBP6.33□□□□□ -1.4
APOBEC3D-201ENST00000216099 NDUFB1O75438 58 aa6.33□□□□□ -1.4
APOBEC3D-201ENST00000216099 DNAH8Q96JB1 4490 aa6.32□□□□□ -1.4
APOBEC3D-201ENST00000216099 LINC00472Q9H8W2 130 aa6.32□□□□□ -1.4
APOBEC3D-201ENST00000216099 IGLV7-46A0A075B6I9 117 aa6.31□□□□□ -1.4
APOBEC3D-201ENST00000216099 DNAH11Q96DT5 4516 aa6.31□□□□□ -1.4
APOBEC3D-201ENST00000216099 Q8N9P0 234 aaPredicted RBP6.31□□□□□ -1.4
APOBEC3D-201ENST00000216099 KRTAP10-1P60331 282 aa6.29□□□□□ -1.4
APOBEC3D-201ENST00000216099 PKD1P98161 4303 aa6.28□□□□□ -1.4
APOBEC3D-201ENST00000216099 DEFB116Q30KQ4 102 aa6.27□□□□□ -1.41
APOBEC3D-201ENST00000216099 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
APOBEC3D-201ENST00000216099 DNAH5Q8TE73 4624 aa6.27□□□□□ -1.41
APOBEC3D-201ENST00000216099 LOC101927531A0A1B0GV80 90 aa6.27□□□□□ -1.41
APOBEC3D-201ENST00000216099 CASC2Q6XLA1 102 aa6.27□□□□□ -1.41
APOBEC3D-201ENST00000216099 Q96NJ1 140 aa6.25□□□□□ -1.41
APOBEC3D-201ENST00000216099 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
APOBEC3D-201ENST00000216099 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
APOBEC3D-201ENST00000216099 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
APOBEC3D-201ENST00000216099 SSBP3-AS1Q7Z2R9 100 aa6.23□□□□□ -1.41
APOBEC3D-201ENST00000216099 CAMK2N1Q7Z7J9 78 aa6.23□□□□□ -1.41
APOBEC3D-201ENST00000216099 SPANXA2-OT1Q8N9U9 137 aa6.23□□□□□ -1.41
APOBEC3D-201ENST00000216099 ANAPC11Q9NYG5 84 aa6.23□□□□□ -1.41
APOBEC3D-201ENST00000216099 ROMO1P60602 79 aa6.22□□□□□ -1.41
APOBEC3D-201ENST00000216099 A8MUU9 505 aa6.21□□□□□ -1.42
APOBEC3D-201ENST00000216099 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.42
APOBEC3D-201ENST00000216099 MMP24-AS1A0A0U1RRL7 71 aa6.2□□□□□ -1.42
APOBEC3D-201ENST00000216099 K7ERS5 55 aa6.2□□□□□ -1.42
APOBEC3D-201ENST00000216099 TYMSOSQ8TAI1 123 aa6.19□□□□□ -1.42
APOBEC3D-201ENST00000216099 HYDINQ4G0P3 5121 aa6.19□□□□□ -1.42
APOBEC3D-201ENST00000216099 H3BPC8 53 aa6.18□□□□□ -1.42
APOBEC3D-201ENST00000216099 H0Y9P7 68 aa6.17□□□□□ -1.42
APOBEC3D-201ENST00000216099 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
APOBEC3D-201ENST00000216099 A0A1B0GVY2 172 aa6.14□□□□□ -1.43
APOBEC3D-201ENST00000216099 KRTAP13-2Q52LG2 175 aa6.14□□□□□ -1.43
APOBEC3D-201ENST00000216099 SACSQ9NZJ4 4579 aa6.14□□□□□ -1.43
APOBEC3D-201ENST00000216099 KRTAP1-4P0C5Y4 121 aa6.14□□□□□ -1.43
APOBEC3D-201ENST00000216099 COA5Q86WW8 74 aa6.14□□□□□ -1.43
APOBEC3D-201ENST00000216099 TP53AIP1Q9HCN2 124 aa6.11□□□□□ -1.43
APOBEC3D-201ENST00000216099 SPINK7P58062 85 aa6.1□□□□□ -1.43
APOBEC3D-201ENST00000216099 LRP1BQ9NZR2 4599 aa6.1□□□□□ -1.43
APOBEC3D-201ENST00000216099 SPINK6Q6UWN8 80 aa6.1□□□□□ -1.43
APOBEC3D-201ENST00000216099 P0C880 135 aa6.09□□□□□ -1.43
APOBEC3D-201ENST00000216099 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
APOBEC3D-201ENST00000216099 LINC01558Q9Y6Z2 57 aa6.08□□□□□ -1.44
APOBEC3D-201ENST00000216099 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
APOBEC3D-201ENST00000216099 MIR22HGQ0VDD5 57 aa6.06□□□□□ -1.44
APOBEC3D-201ENST00000216099 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
APOBEC3D-201ENST00000216099 SPINK1P00995 79 aa6.02□□□□□ -1.45
APOBEC3D-201ENST00000216099 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
APOBEC3D-201ENST00000216099 RPS29P62273 56 aaKnown RBP6.02□□□□□ -1.45
APOBEC3D-201ENST00000216099 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
APOBEC3D-201ENST00000216099 PCOTHQ58A44 107 aa6.01□□□□□ -1.45
APOBEC3D-201ENST00000216099 KRTAP10-4P60372 401 aaPredicted RBP6.01□□□□□ -1.45
APOBEC3D-201ENST00000216099 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
APOBEC3D-201ENST00000216099 RYR2Q92736 4967 aa5.98□□□□□ -1.45
APOBEC3D-201ENST00000216099 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
APOBEC3D-201ENST00000216099 KRTAP13-3Q3SY46 172 aa5.97□□□□□ -1.45
APOBEC3D-201ENST00000216099 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
APOBEC3D-201ENST00000216099 HRES1P13985 223 aa5.96□□□□□ -1.46
APOBEC3D-201ENST00000216099 APOBP04114 4563 aaKnown RBP5.96□□□□□ -1.46
APOBEC3D-201ENST00000216099 PKHD1L1Q86WI1 4243 aa5.95□□□□□ -1.46
APOBEC3D-201ENST00000216099 Q5W150 140 aa5.92□□□□□ -1.46
APOBEC3D-201ENST00000216099 C20orf166-AS1Q96NR2 134 aa5.9□□□□□ -1.47
APOBEC3D-201ENST00000216099 NDUFAF8A1L188 74 aa5.88□□□□□ -1.47
APOBEC3D-201ENST00000216099 KRTAP25-1Q3LHN0 102 aa5.87□□□□□ -1.47
APOBEC3D-201ENST00000216099 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms